RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 CEP57L1Q8IYX8 460 aa6.07□□□□□ -1.44
USP3-215ENST00000559771 CPXM2Q8N436 756 aa6.07□□□□□ -1.44
USP3-215ENST00000559771 GUF1Q8N442 669 aaKnown RBP6.07□□□□□ -1.44
USP3-215ENST00000559771 UBR7Q8N806 425 aa6.07□□□□□ -1.44
USP3-215ENST00000559771 BAHD1Q8TBE0 780 aaPredicted RBP6.07□□□□□ -1.44
USP3-215ENST00000559771 ZCCHC14Q8WYQ9 949 aaKnown RBP6.07□□□□□ -1.44
USP3-215ENST00000559771 EEF2KMTQ96G04 330 aa6.07□□□□□ -1.44
USP3-215ENST00000559771 TOE1Q96GM8 510 aaKnown RBP6.07□□□□□ -1.44
USP3-215ENST00000559771 XPO6Q96QU8 1125 aaKnown RBP6.07□□□□□ -1.44
USP3-215ENST00000559771 ZSWIM1Q9BR11 485 aa6.07□□□□□ -1.44
USP3-215ENST00000559771 UBXN6Q9BZV1 441 aa6.07□□□□□ -1.44
USP3-215ENST00000559771 SLC32A1Q9H598 525 aa6.07□□□□□ -1.44
USP3-215ENST00000559771 CISHQ9NSE2 258 aa6.07□□□□□ -1.44
USP3-215ENST00000559771 TP53BP1Q12888 1972 aaPredicted RBP6.07□□□□□ -1.44
USP3-215ENST00000559771 ADAMTS20P59510 1910 aa6.07□□□□□ -1.44
USP3-215ENST00000559771 FAM208BQ5VWN6 2430 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 METTL12A8MUP2 240 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 C10orf142B7Z368 130 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 CALUO43852 315 aaPredicted RBP6.06□□□□□ -1.44
USP3-215ENST00000559771 DKK1O94907 266 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 MYL1P05976 194 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 FTH1P19P0C7X4 201 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 NCAM1P13591 858 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 HLA-EP13747 358 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 HOXD9P28356 352 aaPredicted RBP6.06□□□□□ -1.44
USP3-215ENST00000559771 HLA-FP30511 346 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 SLC14A1Q13336 389 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 ADAM9Q13443 819 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 TRIP4Q15650 581 aaPredicted RBP6.06□□□□□ -1.44
USP3-215ENST00000559771 TRIP6Q15654 476 aaKnown RBP6.06□□□□□ -1.44
USP3-215ENST00000559771 ZNF124Q15973 351 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 PLEKHG6Q3KR16 790 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 CBWD6Q4V339 395 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 CBWD3Q5JTY5 395 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 KCNT1Q5JUK3 1230 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 CBWD5Q5RIA9 395 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 ARHGAP17Q68EM7 881 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 SDE2Q6IQ49 451 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 KIAA1324Q6UXG2 1013 aaKnown RBP6.06□□□□□ -1.44
USP3-215ENST00000559771 KRBA2Q6ZNG9 492 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 INTS8Q75QN2 995 aaKnown RBP6.06□□□□□ -1.44
USP3-215ENST00000559771 RABEPKQ7Z6M1 372 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 GLRX5Q86SX6 157 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 TMPRSS6Q8IU80 811 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 DENND1CQ8IV53 801 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 NAXDQ8IW45 347 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 FAM186BQ8IYM0 893 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 SMYD4Q8IYR2 804 aaPredicted RBP6.06□□□□□ -1.44
USP3-215ENST00000559771 ZCCHC9Q8N567 271 aaKnown RBP6.06□□□□□ -1.44
USP3-215ENST00000559771 PNPLA1Q8N8W4 532 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 WFDC5Q8TCV5 224 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 ADAMTS14Q8WXS8 1223 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 TMEM176AQ96HP8 235 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 LMLNQ96KR4 655 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 ORAI3Q9BRQ5 295 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 GPR174Q9BXC1 333 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 TMEM245Q9H330 911 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 FAM124BQ9H5Z6 455 aaPredicted RBP6.06□□□□□ -1.44
USP3-215ENST00000559771 MMRN2Q9H8L6 949 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 PRDM16Q9HAZ2 1276 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 TMEM8AQ9HCN3 771 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 ELOVL2Q9NXB9 296 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 MARCH2Q9P0N8 246 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 USP25Q9UHP3 1055 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 RASAL2Q9UJF2 1139 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 STOML2Q9UJZ1 356 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 LSM7Q9UK45 103 aaKnown RBP6.06□□□□□ -1.44
USP3-215ENST00000559771 PCOLCE2Q9UKZ9 415 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 CFAP45Q9UL16 551 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 FNDC3AQ9Y2H6 1198 aaKnown RBP6.06□□□□□ -1.44
USP3-215ENST00000559771 FRMD4BQ9Y2L6 1034 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 NFE2L3Q9Y4A8 694 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 PLXNA2O75051 1894 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 NYNRINQ9P2P1 1898 aaKnown RBP6.06□□□□□ -1.44
USP3-215ENST00000559771 BAHCC1Q9P281 2608 aa6.06□□□□□ -1.44
USP3-215ENST00000559771 NUMA1Q14980 2115 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 IGSF10Q6WRI0 2623 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 A0A1B0GTW7 788 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 SLC12A8A0AV02 714 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 DBX1A6NMT0 343 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 YJEFN3A6XGL0 299 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 E7ENQ6 273 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 H0Y626 953 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 NDUFS2O75306 463 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 CLSTN1O94985 981 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 ALX3O95076 343 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 TRIM16O95361 564 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 ZBED1O96006 694 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 SYPP08247 313 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 RALAP11233 206 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 GTF2H1P32780 548 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 ACSL1P33121 698 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 CHKAP35790 457 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 PSMC2P35998 433 aaKnown RBP6.05□□□□□ -1.44
USP3-215ENST00000559771 SYKP43405 635 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 TKTL1P51854 596 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 ZNF132P52740 706 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 ATXN3P54252 364 aaPredicted RBP6.05□□□□□ -1.44
USP3-215ENST00000559771 PMS1P54277 932 aaKnown RBP6.05□□□□□ -1.44
USP3-215ENST00000559771 YWHAGP61981 247 aaKnown RBP eCLIP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms