RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 PITPNM1O00562 1244 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 WARSP23381 471 aaKnown RBP10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 CRELD2Q6UXH1 353 aaPredicted RBP10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 IQCKQ8N0W5 287 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 ING5Q8WYH8 240 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 PRCCQ92733 491 aaPredicted RBP10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 PBXIP1Q96AQ6 731 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 SUSD3Q96L08 255 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 FCRL2Q96LA5 508 aaPredicted RBP10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 C10orf88Q9H8K7 445 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 SENP1Q9P0U3 644 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 DNAJB4Q9UDY4 337 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 RPS6KL1Q9Y6S9 549 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 CEP290O15078 2479 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 SNX2O60749 519 aa10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 ATP5BP06576 529 aaKnown RBP10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 GEMIN4P57678 1058 aaKnown RBP10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 IFI35P80217 286 aaPredicted RBP10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 SLC12A1Q13621 1099 aa10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 LAMB3Q13751 1172 aa10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 HGSNATQ68CP4 663 aa10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 AADACL2Q6P093 401 aa10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 CCNYL1Q8N7R7 359 aa10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 BBS2Q9BXC9 721 aa10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 FRMD8P1Q9BZ68 369 aaPredicted RBP10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 XAB2Q9HCS7 855 aaKnown RBP10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 HACD3Q9P035 362 aa10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 SMG5Q9UPR3 1016 aaKnown RBP10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 SQORQ9Y6N5 450 aa10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 MYO7AQ13402 2215 aa10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 MEIS3P2A8K0S8 358 aa10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 KPNA3O00505 521 aaPredicted RBP10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 ZNF623O75123 536 aa10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 ASPAP45381 313 aa10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 VCPP55072 806 aaKnown RBP10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 MMRN1Q13201 1228 aa10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 MED21Q13503 144 aa10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 GTF2H3Q13889 308 aa10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 RCN1Q15293 331 aa10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 ANKRD20A2Q5SQ80 823 aa10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 ANKRD20A1Q5TYW2 823 aa10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 SCAMP5Q8TAC9 235 aa10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 LATS2Q9NRM7 1088 aa10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 STK39Q9UEW8 545 aa10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 MCM8Q9UJA3 840 aa10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 ZNF711Q9Y462 761 aa10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 PCDHGC5Q9Y5F6 944 aa10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 MBLAC1A4D2B0 266 aaPredicted RBP10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 TMEM191CA6NGB0 347 aa10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 EDIL3O43854 480 aa10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 ERCC2P18074 760 aa10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 POLR2EP19388 210 aaKnown RBP10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 TAC1P20366 129 aa10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 HOXA11P31270 313 aaPredicted RBP10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 TAF5Q15542 800 aa10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 TMCO2Q7Z6W1 182 aaPredicted RBP10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 HIC2Q96JB3 615 aa10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 SERPINB12Q96P63 405 aa10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 TWNKQ96RR1 684 aa10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 C2orf49Q9BVC5 232 aaPredicted RBP10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 CFAP97Q9P2B7 532 aa10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 STYXL1Q9Y6J8 313 aa10.9□□□□□ -0.66
CARMIL3-202ENST00000559694 C2orf81A6NN90 581 aa10.9□□□□□ -0.67
CARMIL3-202ENST00000559694 CFAP99D6REC4 459 aa10.9□□□□□ -0.67
CARMIL3-202ENST00000559694 TBL1XO60907 577 aa10.9□□□□□ -0.67
CARMIL3-202ENST00000559694 TGM2P21980 687 aa10.9□□□□□ -0.67
CARMIL3-202ENST00000559694 MARCKSL1P49006 195 aa10.9□□□□□ -0.67
CARMIL3-202ENST00000559694 SLC25A52Q3SY17 297 aa10.9□□□□□ -0.67
CARMIL3-202ENST00000559694 FASTKD1Q53R41 847 aaKnown RBP10.9□□□□□ -0.67
CARMIL3-202ENST00000559694 THEMIS2Q5TEJ8 643 aa10.9□□□□□ -0.67
CARMIL3-202ENST00000559694 PTRHD1Q6GMV3 140 aaKnown RBP10.9□□□□□ -0.67
CARMIL3-202ENST00000559694 HS6ST3Q8IZP7 471 aa10.9□□□□□ -0.67
CARMIL3-202ENST00000559694 CFAP52Q8N1V2 620 aa10.9□□□□□ -0.67
CARMIL3-202ENST00000559694 NAT16Q8N8M0 369 aa10.9□□□□□ -0.67
CARMIL3-202ENST00000559694 TDRD5Q8NAT2 981 aaKnown RBP10.9□□□□□ -0.67
CARMIL3-202ENST00000559694 NETO2Q8NC67 525 aa10.9□□□□□ -0.67
CARMIL3-202ENST00000559694 HTR3CQ8WXA8 447 aa10.9□□□□□ -0.67
CARMIL3-202ENST00000559694 SH3KBP1Q96B97 665 aa10.9□□□□□ -0.67
CARMIL3-202ENST00000559694 RAD9AQ99638 391 aa10.9□□□□□ -0.67
CARMIL3-202ENST00000559694 FICDQ9BVA6 458 aa10.9□□□□□ -0.67
CARMIL3-202ENST00000559694 OXCT2Q9BYC2 517 aaPredicted RBP10.9□□□□□ -0.67
CARMIL3-202ENST00000559694 ARHGEF38Q9NXL2 777 aa10.9□□□□□ -0.67
CARMIL3-202ENST00000559694 MPP6Q9NZW5 540 aa10.9□□□□□ -0.67
CARMIL3-202ENST00000559694 UBA2Q9UBT2 640 aaPredicted RBP10.9□□□□□ -0.67
CARMIL3-202ENST00000559694 CRLS1Q9UJA2 301 aa10.9□□□□□ -0.67
CARMIL3-202ENST00000559694 DNPEPQ9ULA0 475 aa10.9□□□□□ -0.67
CARMIL3-202ENST00000559694 PHF24Q9UPV7 400 aa10.9□□□□□ -0.67
CARMIL3-202ENST00000559694 FGF18O76093 207 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 ENO1P06733 434 aaKnown RBP10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 GALTP07902 379 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 ZCCHC18P0CG32 403 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 GOT1P17174 413 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 EN2P19622 333 aaPredicted RBP10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 ENPEPQ07075 957 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 MMEL1Q495T6 779 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 ANKRD20A4Q4UJ75 823 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 TRIM67Q6ZTA4 783 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 DIS3LQ8TF46 1054 aaKnown RBP10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 TRIM54Q9BYV2 358 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 RHOBTB2Q9BYZ6 727 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms