RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 R3HDM2Q9Y2K5 976 aaKnown RBP15.3■□□□□ 0.04
VPS18-202ENST00000558474 BCLAF3A2AJT9 711 aaKnown RBP15.29■□□□□ 0.04
VPS18-202ENST00000558474 FAM187AA6NFU0 413 aa15.29■□□□□ 0.04
VPS18-202ENST00000558474 RBP3P10745 1247 aa15.29■□□□□ 0.04
VPS18-202ENST00000558474 LAMP2P13473 410 aa15.29■□□□□ 0.04
VPS18-202ENST00000558474 FOSL2P15408 326 aa15.29■□□□□ 0.04
VPS18-202ENST00000558474 PECAM1P16284 738 aaPredicted RBP15.29■□□□□ 0.04
VPS18-202ENST00000558474 GGCXP38435 758 aa15.29■□□□□ 0.04
VPS18-202ENST00000558474 OXCT1P55809 520 aa15.29■□□□□ 0.04
VPS18-202ENST00000558474 EIF3EP60228 445 aaKnown RBP15.29■□□□□ 0.04
VPS18-202ENST00000558474 C2orf54Q08AI8 447 aa15.29■□□□□ 0.04
VPS18-202ENST00000558474 GALNT2Q10471 571 aa15.29■□□□□ 0.04
VPS18-202ENST00000558474 SMAD4Q13485 552 aaKnown RBP15.29■□□□□ 0.04
VPS18-202ENST00000558474 PARP15Q460N3 678 aa15.29■□□□□ 0.04
VPS18-202ENST00000558474 C6orf118Q5T5N4 469 aa15.29■□□□□ 0.04
VPS18-202ENST00000558474 RFWD3Q6PCD5 774 aa15.29■□□□□ 0.04
VPS18-202ENST00000558474 C1orf228Q6PIY5 440 aa15.29■□□□□ 0.04
VPS18-202ENST00000558474 MTSS1LQ765P7 747 aa15.29■□□□□ 0.04
VPS18-202ENST00000558474 OTOP3Q7RTS5 596 aa15.29■□□□□ 0.04
VPS18-202ENST00000558474 CDKL3Q8IVW4 592 aaPredicted RBP15.29■□□□□ 0.04
VPS18-202ENST00000558474 TDRD5Q8NAT2 981 aaKnown RBP15.29■□□□□ 0.04
VPS18-202ENST00000558474 OSCP1Q8WVF1 389 aa15.29■□□□□ 0.04
VPS18-202ENST00000558474 C1orf54Q8WWF1 131 aa15.29■□□□□ 0.04
VPS18-202ENST00000558474 MYLIPQ8WY64 445 aa15.29■□□□□ 0.04
VPS18-202ENST00000558474 RUBCNQ92622 972 aa15.29■□□□□ 0.04
VPS18-202ENST00000558474 FATE1Q969F0 183 aa15.29■□□□□ 0.04
VPS18-202ENST00000558474 ELSPBP1Q96BH3 223 aa15.29■□□□□ 0.04
VPS18-202ENST00000558474 HDAC11Q96DB2 347 aa15.29■□□□□ 0.04
VPS18-202ENST00000558474 PRICKLE1Q96MT3 831 aaPredicted RBP15.29■□□□□ 0.04
VPS18-202ENST00000558474 KRT12Q99456 494 aa15.29■□□□□ 0.04
VPS18-202ENST00000558474 KLC2Q9H0B6 622 aa15.29■□□□□ 0.04
VPS18-202ENST00000558474 DDX47Q9H0S4 455 aaKnown RBP15.29■□□□□ 0.04
VPS18-202ENST00000558474 SMG9Q9H0W8 520 aaKnown RBP15.29■□□□□ 0.04
VPS18-202ENST00000558474 UBE2ZQ9H832 354 aaPredicted RBP15.29■□□□□ 0.04
VPS18-202ENST00000558474 THG1LQ9NWX6 298 aaKnown RBP15.29■□□□□ 0.04
VPS18-202ENST00000558474 MPP6Q9NZW5 540 aa15.29■□□□□ 0.04
VPS18-202ENST00000558474 EPS15L1Q9UBC2 864 aa15.29■□□□□ 0.04
VPS18-202ENST00000558474 DNPEPQ9ULA0 475 aa15.29■□□□□ 0.04
VPS18-202ENST00000558474 TBC1D30Q9Y2I9 924 aa15.29■□□□□ 0.04
VPS18-202ENST00000558474 HEY1Q9Y5J3 304 aa15.29■□□□□ 0.04
VPS18-202ENST00000558474 CHD5Q8TDI0 1954 aa15.28■□□□□ 0.04
VPS18-202ENST00000558474 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.28■□□□□ 0.04
VPS18-202ENST00000558474 MTSS1O43312 755 aa15.28■□□□□ 0.04
VPS18-202ENST00000558474 MFSD11O43934 449 aa15.28■□□□□ 0.04
VPS18-202ENST00000558474 GAS8O95995 478 aa15.28■□□□□ 0.04
VPS18-202ENST00000558474 OR1E1P30953 314 aa15.28■□□□□ 0.04
VPS18-202ENST00000558474 ETFBP38117 255 aa15.28■□□□□ 0.04
VPS18-202ENST00000558474 TERF1P54274 439 aa15.28■□□□□ 0.04
VPS18-202ENST00000558474 GBE1Q04446 702 aa15.28■□□□□ 0.04
VPS18-202ENST00000558474 SLC10A2Q12908 348 aaPredicted RBP15.28■□□□□ 0.04
VPS18-202ENST00000558474 ZNF177Q13360 481 aaPredicted RBP15.28■□□□□ 0.04
VPS18-202ENST00000558474 ALFQ53S48 1182 aa15.28■□□□□ 0.04
VPS18-202ENST00000558474 C8orf74Q6P047 294 aa15.28■□□□□ 0.04
VPS18-202ENST00000558474 NPNTQ6UXI9 565 aa15.28■□□□□ 0.04
VPS18-202ENST00000558474 CCDC117Q8IWD4 279 aaPredicted RBP15.28■□□□□ 0.04
VPS18-202ENST00000558474 MFSD6LQ8IWD5 586 aa15.28■□□□□ 0.04
VPS18-202ENST00000558474 KLHL7Q8IXQ5 586 aa15.28■□□□□ 0.04
VPS18-202ENST00000558474 CCDC105Q8IYK2 499 aa15.28■□□□□ 0.04
VPS18-202ENST00000558474 DEFB123Q8N688 67 aa15.28■□□□□ 0.04
VPS18-202ENST00000558474 CCHCR1Q8TD31 782 aa15.28■□□□□ 0.04
VPS18-202ENST00000558474 DEPDC1BQ8WUY9 529 aa15.28■□□□□ 0.04
VPS18-202ENST00000558474 UBXN4Q92575 508 aa15.28■□□□□ 0.04
VPS18-202ENST00000558474 GUCD1Q96NT3 240 aa15.28■□□□□ 0.04
VPS18-202ENST00000558474 TSGA13Q96PP4 275 aa15.28■□□□□ 0.04
VPS18-202ENST00000558474 MAGEH1Q9H213 219 aa15.28■□□□□ 0.04
VPS18-202ENST00000558474 POMKQ9H5K3 350 aa15.28■□□□□ 0.04
VPS18-202ENST00000558474 MARK1Q9P0L2 795 aa15.28■□□□□ 0.04
VPS18-202ENST00000558474 ZNF148Q9UQR1 794 aa15.28■□□□□ 0.04
VPS18-202ENST00000558474 USP15Q9Y4E8 981 aaPredicted RBP15.28■□□□□ 0.04
VPS18-202ENST00000558474 CXorf51AA0A1B0GTR3 108 aa15.27■□□□□ 0.04
VPS18-202ENST00000558474 ILVBLA1L0T0 632 aa15.27■□□□□ 0.04
VPS18-202ENST00000558474 ARHGAP42A6NI28 874 aa15.27■□□□□ 0.04
VPS18-202ENST00000558474 HEPACAM2A8MVW5 462 aa15.27■□□□□ 0.04
VPS18-202ENST00000558474 TBL1XO60907 577 aa15.27■□□□□ 0.04
VPS18-202ENST00000558474 ECI2O75521 394 aa15.27■□□□□ 0.04
VPS18-202ENST00000558474 CNTN5O94779 1100 aa15.27■□□□□ 0.04
VPS18-202ENST00000558474 ECEL1O95672 775 aa15.27■□□□□ 0.04
VPS18-202ENST00000558474 FCARP24071 287 aa15.27■□□□□ 0.04
VPS18-202ENST00000558474 CCNCP24863 283 aa15.27■□□□□ 0.04
VPS18-202ENST00000558474 GBP2P32456 591 aaPredicted RBP15.27■□□□□ 0.04
VPS18-202ENST00000558474 GARSP41250 739 aaKnown RBP15.27■□□□□ 0.04
VPS18-202ENST00000558474 DR1Q01658 176 aa15.27■□□□□ 0.04
VPS18-202ENST00000558474 PPIDQ08752 370 aaKnown RBP15.27■□□□□ 0.04
VPS18-202ENST00000558474 FCHO2Q0JRZ9 810 aa15.27■□□□□ 0.04
VPS18-202ENST00000558474 SLC12A1Q13621 1099 aa15.27■□□□□ 0.04
VPS18-202ENST00000558474 PDGFRLQ15198 375 aa15.27■□□□□ 0.04
VPS18-202ENST00000558474 PUS10Q3MIT2 529 aaKnown RBP15.27■□□□□ 0.04
VPS18-202ENST00000558474 SLC45A4Q5BKX6 768 aa15.27■□□□□ 0.04
VPS18-202ENST00000558474 TIGD7Q6NT04 549 aaPredicted RBP15.27■□□□□ 0.04
VPS18-202ENST00000558474 TTC27Q6P3X3 843 aa15.27■□□□□ 0.04
VPS18-202ENST00000558474 C4orf22Q6V702 233 aa15.27■□□□□ 0.04
VPS18-202ENST00000558474 ARHGAP12Q8IWW6 846 aa15.27■□□□□ 0.04
VPS18-202ENST00000558474 ADGRG2Q8IZP9 1017 aa15.27■□□□□ 0.04
VPS18-202ENST00000558474 NPWQ8N729 165 aa15.27■□□□□ 0.04
VPS18-202ENST00000558474 NOA1Q8NC60 698 aaKnown RBP15.27■□□□□ 0.04
VPS18-202ENST00000558474 MYRIPQ8NFW9 859 aa15.27■□□□□ 0.04
VPS18-202ENST00000558474 TFB1MQ8WVM0 346 aaKnown RBP15.27■□□□□ 0.04
VPS18-202ENST00000558474 ATG4AQ8WYN0 398 aa15.27■□□□□ 0.04
VPS18-202ENST00000558474 IRF7Q92985 503 aa15.27■□□□□ 0.04
VPS18-202ENST00000558474 HLA-CQ95604 372 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms