RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 SLC25A11Q02978 314 aaKnown RBP5.64□□□□□ -1.51
GABPB1-207ENST00000558335 PTPN11Q06124 597 aaPredicted RBP5.64□□□□□ -1.51
GABPB1-207ENST00000558335 AP1B1Q10567 949 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 MPP2Q14168 576 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 TSC22D1Q15714 1073 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 SHROOM1Q2M3G4 852 aaPredicted RBP5.64□□□□□ -1.51
GABPB1-207ENST00000558335 DCAF4L1Q3SXM0 396 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 SH3D19Q5HYK7 790 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 FAM209AQ5JX71 171 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 TMEM63BQ5T3F8 832 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 ATF7IP2Q5U623 682 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 RNF220Q5VTB9 566 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 METTL21CQ5VZV1 264 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 ZCCHC8Q6NZY4 707 aaKnown RBP5.64□□□□□ -1.51
GABPB1-207ENST00000558335 BORAQ6PGQ7 559 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 MARK2Q7KZI7 788 aaKnown RBP5.64□□□□□ -1.51
GABPB1-207ENST00000558335 TAS1R3Q7RTX0 852 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 MTDHQ86UE4 582 aaKnown RBP5.64□□□□□ -1.51
GABPB1-207ENST00000558335 UNC93AQ86WB7 457 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 IFNLR1Q8IU57 520 aaPredicted RBP5.64□□□□□ -1.51
GABPB1-207ENST00000558335 RIOX2Q8IUF8 465 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 NUDCD3Q8IVD9 361 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 CYP4X1Q8N118 509 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 C4orf33Q8N1A6 199 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 MINDY2Q8NBR6 621 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 REPS2Q8NFH8 660 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 ENKURQ8TC29 256 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 DCAKDQ8WVC6 231 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 OSCP1Q8WVF1 389 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 TTC9Q92623 222 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 TRIM63Q969Q1 353 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 TTC17Q96AE7 1141 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 E2F7Q96AV8 911 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 FAM149B1Q96BN6 582 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 ATG4CQ96DT6 458 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 OXNAD1Q96HP4 312 aaPredicted RBP5.64□□□□□ -1.51
GABPB1-207ENST00000558335 PAWRQ96IZ0 340 aaKnown RBP5.64□□□□□ -1.51
GABPB1-207ENST00000558335 C1orf74Q96LT6 269 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 CEP295NLQ96MC4 621 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 TSNARE1Q96NA8 513 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 MOGAT1Q96PD6 335 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 SERPINI1Q99574 410 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 CTRCQ99895 268 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 DHRS9Q9BPW9 319 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 TSEN34Q9BSV6 310 aaKnown RBP5.64□□□□□ -1.51
GABPB1-207ENST00000558335 KIFC3Q9BVG8 833 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 TARS2Q9BW92 718 aaKnown RBP5.64□□□□□ -1.51
GABPB1-207ENST00000558335 NT5C1AQ9BXI3 368 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 CALN1Q9BXU9 219 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 MRPL1Q9BYD6 325 aaKnown RBP5.64□□□□□ -1.51
GABPB1-207ENST00000558335 TRIM8Q9BZR9 551 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 ABCG4Q9H172 646 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 BCAS3Q9H6U6 928 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 PLEKHA5Q9HAU0 1116 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 APOBEC3GQ9HC16 384 aaKnown RBP5.64□□□□□ -1.51
GABPB1-207ENST00000558335 C8orf4Q9NR00 106 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 SLC39A1Q9NY26 324 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 PLK2Q9NYY3 685 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 PIM2Q9P1W9 311 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 EPS15L1Q9UBC2 864 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 HSFX1Q9UBD0 423 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 HEY2Q9UBP5 337 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 MORF4L1Q9UBU8 362 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 ZC3H7BQ9UGR2 993 aaKnown RBP5.64□□□□□ -1.51
GABPB1-207ENST00000558335 TAGLN3Q9UI15 199 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 ADAM28Q9UKQ2 775 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 ZNF214Q9UL59 606 aaPredicted RBP5.64□□□□□ -1.51
GABPB1-207ENST00000558335 TRIM33Q9UPN9 1127 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 PLLPQ9Y342 182 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 TEX264Q9Y6I9 313 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 SF3B1O75533 1304 aaKnown RBP eCLIP5.64□□□□□ -1.51
GABPB1-207ENST00000558335 LTBP3Q9NS15 1303 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 ZSWIM8A7E2V4 1837 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 TNS1Q9HBL0 1735 aaKnown RBP5.63□□□□□ -1.51
GABPB1-207ENST00000558335 IGKV6-21A0A0C4DH24 114 aa5.63□□□□□ -1.51
GABPB1-207ENST00000558335 TCRBV9S1A1TA0A576 114 aa5.63□□□□□ -1.51
GABPB1-207ENST00000558335 ASB14A6NK59 587 aa5.63□□□□□ -1.51
GABPB1-207ENST00000558335 C3orf70A6NLC5 250 aaPredicted RBP5.63□□□□□ -1.51
GABPB1-207ENST00000558335 KPNA7A9QM74 516 aa5.63□□□□□ -1.51
GABPB1-207ENST00000558335 F8VP50 259 aa5.63□□□□□ -1.51
GABPB1-207ENST00000558335 PI4K2BG5E9Z4 385 aa5.63□□□□□ -1.51
GABPB1-207ENST00000558335 FAM189A1O60320 539 aa5.63□□□□□ -1.51
GABPB1-207ENST00000558335 OPHN1O60890 802 aa5.63□□□□□ -1.51
GABPB1-207ENST00000558335 PEX11AO75192 247 aa5.63□□□□□ -1.51
GABPB1-207ENST00000558335 CILPO75339 1184 aa5.63□□□□□ -1.51
GABPB1-207ENST00000558335 LGR5O75473 907 aa5.63□□□□□ -1.51
GABPB1-207ENST00000558335 PSMG1O95456 288 aa5.63□□□□□ -1.51
GABPB1-207ENST00000558335 RPS17P08708 135 aaKnown RBP5.63□□□□□ -1.51
GABPB1-207ENST00000558335 RARBP10826 455 aa5.63□□□□□ -1.51
GABPB1-207ENST00000558335 KRT10P13645 584 aa5.63□□□□□ -1.51
GABPB1-207ENST00000558335 PDGFRAP16234 1089 aa5.63□□□□□ -1.51
GABPB1-207ENST00000558335 PTPRAP18433 802 aa5.63□□□□□ -1.51
GABPB1-207ENST00000558335 PROZP22891 400 aa5.63□□□□□ -1.51
GABPB1-207ENST00000558335 CFL1P23528 166 aaKnown RBP5.63□□□□□ -1.51
GABPB1-207ENST00000558335 EDNRBP24530 442 aa5.63□□□□□ -1.51
GABPB1-207ENST00000558335 GCAP28676 217 aa5.63□□□□□ -1.51
GABPB1-207ENST00000558335 SERPINB3P29508 390 aa5.63□□□□□ -1.51
GABPB1-207ENST00000558335 RFC1P35251 1148 aaPredicted RBP5.63□□□□□ -1.51
GABPB1-207ENST00000558335 NUDT1P36639 197 aa5.63□□□□□ -1.51
GABPB1-207ENST00000558335 ARL4AP40617 200 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms