RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 FBXO10Q9UK96 956 aa21.88■■□□□ 1.09
CASC4-204ENST00000557945 NDRG2Q9UN36 371 aaKnown RBP21.88■■□□□ 1.09
CASC4-204ENST00000557945 NEU3Q9UQ49 428 aa21.88■■□□□ 1.09
CASC4-204ENST00000557945 GOLGA6L9A6NEM1 432 aa21.87■■□□□ 1.09
CASC4-204ENST00000557945 FGF10O15520 208 aaPredicted RBP21.87■■□□□ 1.09
CASC4-204ENST00000557945 APODP05090 189 aa21.87■■□□□ 1.09
CASC4-204ENST00000557945 CISD3P0C7P0 127 aa21.87■■□□□ 1.09
CASC4-204ENST00000557945 KDELR1P24390 212 aa21.87■■□□□ 1.09
CASC4-204ENST00000557945 OR1E1P30953 314 aa21.87■■□□□ 1.09
CASC4-204ENST00000557945 HOXC13P31276 330 aa21.87■■□□□ 1.09
CASC4-204ENST00000557945 CTNNA1P35221 906 aaKnown RBP21.87■■□□□ 1.09
CASC4-204ENST00000557945 MARCKSL1P49006 195 aa21.87■■□□□ 1.09
CASC4-204ENST00000557945 ARSEP51690 589 aa21.87■■□□□ 1.09
CASC4-204ENST00000557945 GRSF1Q12849 480 aaKnown RBP eCLIP21.87■■□□□ 1.09
CASC4-204ENST00000557945 FSCBQ5H9T9 825 aa21.87■■□□□ 1.09
CASC4-204ENST00000557945 RNF43Q68DV7 783 aa21.87■■□□□ 1.09
CASC4-204ENST00000557945 ASTLQ6HA08 431 aaPredicted RBP21.87■■□□□ 1.09
CASC4-204ENST00000557945 TRIM67Q6ZTA4 783 aa21.87■■□□□ 1.09
CASC4-204ENST00000557945 TRIM58Q8NG06 486 aa21.87■■□□□ 1.09
CASC4-204ENST00000557945 RNF25Q96BH1 459 aaPredicted RBP21.87■■□□□ 1.09
CASC4-204ENST00000557945 CSPG4P5Q96PW8 444 aa21.87■■□□□ 1.09
CASC4-204ENST00000557945 COL25A1Q9BXS0 654 aaPredicted RBP21.87■■□□□ 1.09
CASC4-204ENST00000557945 PACSIN2Q9UNF0 486 aaPredicted RBP21.87■■□□□ 1.09
CASC4-204ENST00000557945 MRPS17Q9Y2R5 130 aaKnown RBP21.87■■□□□ 1.09
CASC4-204ENST00000557945 CCDC66A2RUB6 948 aa21.87■■□□□ 1.09
CASC4-204ENST00000557945 TBC1D3BA6NDS4 549 aa21.87■■□□□ 1.09
CASC4-204ENST00000557945 KAT7O95251 611 aa21.87■■□□□ 1.09
CASC4-204ENST00000557945 RHOCP08134 193 aa21.87■■□□□ 1.09
CASC4-204ENST00000557945 CTNNA2P26232 953 aa21.87■■□□□ 1.09
CASC4-204ENST00000557945 HLA-FP30511 346 aa21.87■■□□□ 1.09
CASC4-204ENST00000557945 HCAR3P49019 387 aa21.87■■□□□ 1.09
CASC4-204ENST00000557945 DNA2P51530 1060 aa21.87■■□□□ 1.09
CASC4-204ENST00000557945 STARD6P59095 220 aa21.87■■□□□ 1.09
CASC4-204ENST00000557945 MESP2Q0VG99 397 aa21.87■■□□□ 1.09
CASC4-204ENST00000557945 LMAN2Q12907 356 aa21.87■■□□□ 1.09
CASC4-204ENST00000557945 MMRN1Q13201 1228 aa21.87■■□□□ 1.09
CASC4-204ENST00000557945 DPYSL3Q14195 570 aa21.87■■□□□ 1.09
CASC4-204ENST00000557945 UBXN2BQ14CS0 331 aa21.87■■□□□ 1.09
CASC4-204ENST00000557945 NLRP14Q86W24 1093 aa21.87■■□□□ 1.09
CASC4-204ENST00000557945 FAM71BQ8TC56 605 aa21.87■■□□□ 1.09
CASC4-204ENST00000557945 MFSD1Q9H3U5 465 aa21.87■■□□□ 1.09
CASC4-204ENST00000557945 TBC1D17Q9HA65 648 aa21.87■■□□□ 1.09
CASC4-204ENST00000557945 TMEM248Q9NWD8 314 aa21.87■■□□□ 1.09
CASC4-204ENST00000557945 KIAA1522Q9P206 1035 aaPredicted RBP21.87■■□□□ 1.09
CASC4-204ENST00000557945 RCOR3Q9P2K3 495 aaPredicted RBP21.87■■□□□ 1.09
CASC4-204ENST00000557945 DNAI1Q9UI46 699 aa21.87■■□□□ 1.09
CASC4-204ENST00000557945 PCDHA3Q9Y5H8 950 aa21.87■■□□□ 1.09
CASC4-204ENST00000557945 KANSL1LA0AUZ9 987 aa21.86■■□□□ 1.09
CASC4-204ENST00000557945 SHISA7A6NL88 538 aa21.86■■□□□ 1.09
CASC4-204ENST00000557945 TNFRSF10AO00220 468 aa21.86■■□□□ 1.09
CASC4-204ENST00000557945 KIF5CO60282 957 aa21.86■■□□□ 1.09
CASC4-204ENST00000557945 ERCC2P18074 760 aa21.86■■□□□ 1.09
CASC4-204ENST00000557945 AMPD1P23109 780 aa21.86■■□□□ 1.09
CASC4-204ENST00000557945 CD70P32970 193 aa21.86■■□□□ 1.09
CASC4-204ENST00000557945 GRIA2P42262 883 aa21.86■■□□□ 1.09
CASC4-204ENST00000557945 DPYSQ14117 519 aa21.86■■□□□ 1.09
CASC4-204ENST00000557945 TMEM196Q5HYL7 178 aa21.86■■□□□ 1.09
CASC4-204ENST00000557945 C6orf118Q5T5N4 469 aa21.86■■□□□ 1.09
CASC4-204ENST00000557945 CXorf57Q6NSI4 855 aaKnown RBP21.86■■□□□ 1.09
CASC4-204ENST00000557945 NUDT18Q6ZVK8 323 aa21.86■■□□□ 1.09
CASC4-204ENST00000557945 ANKS1BQ7Z6G8 1248 aa21.86■■□□□ 1.09
CASC4-204ENST00000557945 SUGP1Q8IWZ8 645 aaKnown RBP21.86■■□□□ 1.09
CASC4-204ENST00000557945 KATNAL2Q8IYT4 538 aa21.86■■□□□ 1.09
CASC4-204ENST00000557945 PHTF2Q8N3S3 785 aa21.86■■□□□ 1.09
CASC4-204ENST00000557945 UBL4BQ8N7F7 174 aa21.86■■□□□ 1.09
CASC4-204ENST00000557945 RTL3Q8N8U3 475 aaKnown RBP21.86■■□□□ 1.09
CASC4-204ENST00000557945 TERB1Q8NA31 727 aa21.86■■□□□ 1.09
CASC4-204ENST00000557945 TSC1Q92574 1164 aa21.86■■□□□ 1.09
CASC4-204ENST00000557945 ZNF670Q9BS34 389 aa21.86■■□□□ 1.09
CASC4-204ENST00000557945 FOXQ1Q9C009 403 aa21.86■■□□□ 1.09
CASC4-204ENST00000557945 RETREG1Q9H6L5 497 aa21.86■■□□□ 1.09
CASC4-204ENST00000557945 GGA2Q9UJY4 613 aa21.86■■□□□ 1.09
CASC4-204ENST00000557945 TBC1D30Q9Y2I9 924 aa21.86■■□□□ 1.09
CASC4-204ENST00000557945 SLC27A6Q9Y2P4 619 aa21.86■■□□□ 1.09
CASC4-204ENST00000557945 MIF4GDA9UHW6 222 aaKnown RBP21.85■■□□□ 1.09
CASC4-204ENST00000557945 ZRANB2O95218 330 aaKnown RBP eCLIP21.85■■□□□ 1.099e-9■■■□□ 15.7
CASC4-204ENST00000557945 PABPC1P11940 636 aaKnown RBP21.85■■□□□ 1.09
CASC4-204ENST00000557945 DRD1P21728 446 aa21.85■■□□□ 1.09
CASC4-204ENST00000557945 MAPKAPK2P49137 400 aa21.85■■□□□ 1.09
CASC4-204ENST00000557945 OXCT1P55809 520 aa21.85■■□□□ 1.09
CASC4-204ENST00000557945 GEN1Q17RS7 908 aa21.85■■□□□ 1.09
CASC4-204ENST00000557945 HS1BP3Q53T59 392 aa21.85■■□□□ 1.09
CASC4-204ENST00000557945 ZNF569Q5MCW4 686 aa21.85■■□□□ 1.09
CASC4-204ENST00000557945 RNF219Q5W0B1 726 aaPredicted RBP21.85■■□□□ 1.09
CASC4-204ENST00000557945 FSTL4Q6MZW2 842 aa21.85■■□□□ 1.09
CASC4-204ENST00000557945 SETD3Q86TU7 594 aaPredicted RBP21.85■■□□□ 1.09
CASC4-204ENST00000557945 CCDC50Q8IVM0 306 aa21.85■■□□□ 1.09
CASC4-204ENST00000557945 C17orf53Q8N3J3 647 aaPredicted RBP21.85■■□□□ 1.09
CASC4-204ENST00000557945 FLCNQ8NFG4 579 aa21.85■■□□□ 1.09
CASC4-204ENST00000557945 MUC3BQ9H195 1237 aa21.85■■□□□ 1.09
CASC4-204ENST00000557945 LTB4R2Q9NPC1 389 aa21.85■■□□□ 1.09
CASC4-204ENST00000557945 NDFIP2Q9NV92 336 aa21.85■■□□□ 1.09
CASC4-204ENST00000557945 ZNF212Q9UDV6 495 aa21.85■■□□□ 1.09
CASC4-204ENST00000557945 TMEM221A6NGB7 291 aa21.84■■□□□ 1.09
CASC4-204ENST00000557945 FAM170BA6NMN3 283 aa21.84■■□□□ 1.09
CASC4-204ENST00000557945 WASH4PA8MWX3 477 aa21.84■■□□□ 1.09
CASC4-204ENST00000557945 M0R296 226 aa21.84■■□□□ 1.09
CASC4-204ENST00000557945 EGFP01133 1207 aa21.84■■□□□ 1.09
CASC4-204ENST00000557945 IL4RP24394 825 aa21.84■■□□□ 1.09
CASC4-204ENST00000557945 TARSP26639 723 aaKnown RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms