RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 NTN3O00634 580 aaPredicted RBP9.8□□□□□ -0.84
NEDD1-211ENST00000557454 CTDNEP1O95476 244 aa9.8□□□□□ -0.84
NEDD1-211ENST00000557454 TMEM191BP0C7N4 346 aa9.8□□□□□ -0.84
NEDD1-211ENST00000557454 SLC6A4P31645 630 aa9.8□□□□□ -0.84
NEDD1-211ENST00000557454 ETV5P41161 510 aa9.8□□□□□ -0.84
NEDD1-211ENST00000557454 PDE4CQ08493 712 aa9.8□□□□□ -0.84
NEDD1-211ENST00000557454 GNL2Q13823 731 aaKnown RBP9.8□□□□□ -0.84
NEDD1-211ENST00000557454 DEFB133Q30KQ1 61 aa9.8□□□□□ -0.84
NEDD1-211ENST00000557454 HNRNPA1L2Q32P51 320 aaKnown RBP9.8□□□□□ -0.84
NEDD1-211ENST00000557454 KRT79Q5XKE5 535 aa9.8□□□□□ -0.84
NEDD1-211ENST00000557454 SLFN12LQ6IEE8 588 aa9.8□□□□□ -0.84
NEDD1-211ENST00000557454 KLHDC10Q6PID8 442 aa9.8□□□□□ -0.84
NEDD1-211ENST00000557454 AHI1Q8N157 1196 aa9.8□□□□□ -0.84
NEDD1-211ENST00000557454 MYCT1Q8N699 235 aa9.8□□□□□ -0.84
NEDD1-211ENST00000557454 IGSF22Q8N9C0 903 aa9.8□□□□□ -0.84
NEDD1-211ENST00000557454 TEX19Q8NA77 164 aa9.8□□□□□ -0.84
NEDD1-211ENST00000557454 TMEM145Q8NBT3 493 aa9.8□□□□□ -0.84
NEDD1-211ENST00000557454 ZNF548Q8NEK5 533 aaPredicted RBP9.8□□□□□ -0.84
NEDD1-211ENST00000557454 OR13H1Q8NG92 308 aa9.8□□□□□ -0.84
NEDD1-211ENST00000557454 WDR48Q8TAF3 677 aa9.8□□□□□ -0.84
NEDD1-211ENST00000557454 POMGNT1Q8WZA1 660 aa9.8□□□□□ -0.84
NEDD1-211ENST00000557454 SAAL1Q96ER3 474 aa9.8□□□□□ -0.84
NEDD1-211ENST00000557454 MYO19Q96H55 970 aa9.8□□□□□ -0.84
NEDD1-211ENST00000557454 PPP1R13BQ96KQ4 1090 aa9.8□□□□□ -0.84
NEDD1-211ENST00000557454 CCDC3Q9BQI4 270 aa9.8□□□□□ -0.84
NEDD1-211ENST00000557454 MED10Q9BTT4 135 aa9.8□□□□□ -0.84
NEDD1-211ENST00000557454 STRADBQ9C0K7 418 aa9.8□□□□□ -0.84
NEDD1-211ENST00000557454 KRT82Q9NSB4 513 aa9.8□□□□□ -0.84
NEDD1-211ENST00000557454 COMMD8Q9NX08 183 aa9.8□□□□□ -0.84
NEDD1-211ENST00000557454 DNAJC28Q9NX36 388 aa9.8□□□□□ -0.84
NEDD1-211ENST00000557454 NCKIPSDQ9NZQ3 722 aa9.8□□□□□ -0.84
NEDD1-211ENST00000557454 A0A1W2PQ27 194 aa9.79□□□□□ -0.84
NEDD1-211ENST00000557454 A0A1W2PQ64 194 aa9.79□□□□□ -0.84
NEDD1-211ENST00000557454 A0A1W2PQC6 194 aa9.79□□□□□ -0.84
NEDD1-211ENST00000557454 A0A1W2PQH9 124 aa9.79□□□□□ -0.84
NEDD1-211ENST00000557454 ARHGAP10A1A4S6 786 aa9.79□□□□□ -0.84
NEDD1-211ENST00000557454 D6RAR5 112 aa9.79□□□□□ -0.84
NEDD1-211ENST00000557454 LDLRP01130 860 aa9.79□□□□□ -0.84
NEDD1-211ENST00000557454 ATP5BP06576 529 aaKnown RBP9.79□□□□□ -0.84
NEDD1-211ENST00000557454 PABPC1P11940 636 aaKnown RBP9.79□□□□□ -0.84
NEDD1-211ENST00000557454 PSMA5P28066 241 aa9.79□□□□□ -0.84
NEDD1-211ENST00000557454 NUDT1P36639 197 aa9.79□□□□□ -0.84
NEDD1-211ENST00000557454 SLC12A3P55017 1021 aa9.79□□□□□ -0.84
NEDD1-211ENST00000557454 ARSHQ5FYA8 562 aa9.79□□□□□ -0.84
NEDD1-211ENST00000557454 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.79□□□□□ -0.84
NEDD1-211ENST00000557454 PAQR9Q6ZVX9 377 aa9.79□□□□□ -0.84
NEDD1-211ENST00000557454 GPRIN1Q7Z2K8 1008 aa9.79□□□□□ -0.84
NEDD1-211ENST00000557454 TMPRSS9Q7Z410 1059 aa9.79□□□□□ -0.84
NEDD1-211ENST00000557454 DENND1CQ8IV53 801 aa9.79□□□□□ -0.84
NEDD1-211ENST00000557454 MMP21Q8N119 569 aa9.79□□□□□ -0.84
NEDD1-211ENST00000557454 SLC22A18ASQ8N1D0 253 aa9.79□□□□□ -0.84
NEDD1-211ENST00000557454 SYT2Q8N9I0 419 aaPredicted RBP9.79□□□□□ -0.84
NEDD1-211ENST00000557454 ZMIZ2Q8NF64 920 aa9.79□□□□□ -0.84
NEDD1-211ENST00000557454 CPT1CQ8TCG5 803 aa9.79□□□□□ -0.84
NEDD1-211ENST00000557454 PTCD2Q8WV60 388 aaKnown RBP9.79□□□□□ -0.84
NEDD1-211ENST00000557454 WASF1Q92558 559 aa9.79□□□□□ -0.84
NEDD1-211ENST00000557454 USP7Q93009 1102 aa9.79□□□□□ -0.84
NEDD1-211ENST00000557454 TCTN2Q96GX1 697 aa9.79□□□□□ -0.84
NEDD1-211ENST00000557454 CATSPER2Q96P56 530 aa9.79□□□□□ -0.84
NEDD1-211ENST00000557454 REEP2Q9BRK0 252 aa9.79□□□□□ -0.84
NEDD1-211ENST00000557454 MMTAG2Q9BU76 263 aaKnown RBP9.79□□□□□ -0.84
NEDD1-211ENST00000557454 UNKQ9C0B0 810 aaKnown RBP9.79□□□□□ -0.84
NEDD1-211ENST00000557454 FBXO44Q9H4M3 255 aa9.79□□□□□ -0.84
NEDD1-211ENST00000557454 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.79□□□□□ -0.84
NEDD1-211ENST00000557454 RBAKQ9NYW8 714 aaPredicted RBP9.79□□□□□ -0.84
NEDD1-211ENST00000557454 RASAL2Q9UJF2 1139 aa9.79□□□□□ -0.84
NEDD1-211ENST00000557454 R3HCC1Q9Y3T6 440 aaKnown RBP9.79□□□□□ -0.84
NEDD1-211ENST00000557454 NIPBLQ6KC79 2804 aaeCLIP9.79□□□□□ -0.84
NEDD1-211ENST00000557454 ATP8B3O60423 1300 aa9.79□□□□□ -0.84
NEDD1-211ENST00000557454 TDRD6O60522 2096 aaKnown RBP9.78□□□□□ -0.84
NEDD1-211ENST00000557454 MYH11P35749 1972 aa9.78□□□□□ -0.84
NEDD1-211ENST00000557454 A8MXQ7 604 aa9.78□□□□□ -0.84
NEDD1-211ENST00000557454 C9orf172C9J069 976 aa9.78□□□□□ -0.84
NEDD1-211ENST00000557454 K7EM74 188 aa9.78□□□□□ -0.84
NEDD1-211ENST00000557454 AP1G2O75843 785 aa9.78□□□□□ -0.84
NEDD1-211ENST00000557454 BEST1O76090 585 aa9.78□□□□□ -0.84
NEDD1-211ENST00000557454 PLA2G4BP0C869 781 aa9.78□□□□□ -0.84
NEDD1-211ENST00000557454 FDPSP14324 419 aaKnown RBP9.78□□□□□ -0.84
NEDD1-211ENST00000557454 LIFP15018 202 aa9.78□□□□□ -0.84
NEDD1-211ENST00000557454 PRLRP16471 622 aa9.78□□□□□ -0.84
NEDD1-211ENST00000557454 SCP2P22307 547 aa9.78□□□□□ -0.84
NEDD1-211ENST00000557454 DRD3P35462 400 aa9.78□□□□□ -0.84
NEDD1-211ENST00000557454 METAP1P53582 386 aa9.78□□□□□ -0.84
NEDD1-211ENST00000557454 MAPK10P53779 464 aa9.78□□□□□ -0.84
NEDD1-211ENST00000557454 HNRNPKP61978 463 aaKnown RBP eCLIP9.78□□□□□ -0.84
NEDD1-211ENST00000557454 GTF2BQ00403 316 aa9.78□□□□□ -0.84
NEDD1-211ENST00000557454 ORC2Q13416 577 aaPredicted RBP9.78□□□□□ -0.84
NEDD1-211ENST00000557454 EIF2S3LQ2VIR3 472 aaKnown RBP9.78□□□□□ -0.84
NEDD1-211ENST00000557454 SETMARQ53H47 684 aaPredicted RBP9.78□□□□□ -0.84
NEDD1-211ENST00000557454 C9orf64Q5T6V5 341 aa9.78□□□□□ -0.84
NEDD1-211ENST00000557454 NUGGCQ68CJ6 796 aa9.78□□□□□ -0.84
NEDD1-211ENST00000557454 RUFY3Q7L099 469 aa9.78□□□□□ -0.84
NEDD1-211ENST00000557454 TRIM69Q86WT6 500 aa9.78□□□□□ -0.84
NEDD1-211ENST00000557454 SLC35F3Q8IY50 421 aa9.78□□□□□ -0.84
NEDD1-211ENST00000557454 CPXM2Q8N436 756 aa9.78□□□□□ -0.84
NEDD1-211ENST00000557454 ZNF276Q8N554 614 aa9.78□□□□□ -0.84
NEDD1-211ENST00000557454 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.78□□□□□ -0.84
NEDD1-211ENST00000557454 WFDC5Q8TCV5 224 aa9.78□□□□□ -0.84
NEDD1-211ENST00000557454 NAT6Q93015 286 aa9.78□□□□□ -0.84
NEDD1-211ENST00000557454 SMARCD1Q96GM5 515 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms