RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 PPM1EQ8WY54 764 aa18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 HDAC11Q96DB2 347 aa18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 TBC1D31Q96DN5 1066 aa18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 TOX2Q96NM4 488 aa18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 SMC6Q96SB8 1091 aa18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 EBNA1BP2Q99848 306 aaKnown RBP18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 GORASP1Q9BQQ3 440 aa18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 CRISPLD2Q9H0B8 497 aa18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 XAB2Q9HCS7 855 aaKnown RBP18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 UBP1Q9NZI7 540 aa18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 TBX21Q9UL17 535 aa18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 VANGL2Q9ULK5 521 aa18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 VIMP08670 466 aaKnown RBP18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 TSHRP16473 764 aa18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 KRT4P19013 534 aa18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 MGAT1P26572 445 aa18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 CD68P34810 354 aaPredicted RBP18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 LRRC34Q8IZ02 419 aa18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 UNC5BQ8IZJ1 945 aa18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 GPATCH11Q8N954 259 aa18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 DHRS4Q9BTZ2 278 aa18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 NKIRAS1Q9NYS0 192 aa18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 TLR6Q9Y2C9 796 aa18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 RAD54BQ9Y620 910 aa18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 IKBKGQ9Y6K9 419 aa18.78■□□□□ 0.6
SDR39U1-220ENST00000556548 FNDC1Q4ZHG4 1894 aaPredicted RBP18.77■□□□□ 0.6
SDR39U1-220ENST00000556548 EBAG9O00559 213 aa18.77■□□□□ 0.6
SDR39U1-220ENST00000556548 UGT1A9O60656 530 aa18.77■□□□□ 0.6
SDR39U1-220ENST00000556548 ATF6P18850 670 aa18.77■□□□□ 0.6
SDR39U1-220ENST00000556548 ITGB8P26012 769 aa18.77■□□□□ 0.6
SDR39U1-220ENST00000556548 ZNF135P52742 658 aaPredicted RBP18.77■□□□□ 0.6
SDR39U1-220ENST00000556548 NR1H3Q13133 447 aa18.77■□□□□ 0.6
SDR39U1-220ENST00000556548 ARTNQ5T4W7 220 aa18.77■□□□□ 0.6
SDR39U1-220ENST00000556548 KIAA1841Q6NSI8 718 aa18.77■□□□□ 0.6
SDR39U1-220ENST00000556548 ARHGAP18Q8N392 663 aa18.77■□□□□ 0.6
SDR39U1-220ENST00000556548 ZNF317Q96PQ6 595 aaPredicted RBP18.77■□□□□ 0.6
SDR39U1-220ENST00000556548 CCSER2Q9H7U1 834 aa18.77■□□□□ 0.6
SDR39U1-220ENST00000556548 UGT1A7Q9HAW7 530 aa18.77■□□□□ 0.6
SDR39U1-220ENST00000556548 UGT1A10Q9HAW8 530 aa18.77■□□□□ 0.6
SDR39U1-220ENST00000556548 UGT1A8Q9HAW9 530 aa18.77■□□□□ 0.6
SDR39U1-220ENST00000556548 PRDM5Q9NQX1 630 aaPredicted RBP18.77■□□□□ 0.6
SDR39U1-220ENST00000556548 SMYD2Q9NRG4 433 aa18.77■□□□□ 0.6
SDR39U1-220ENST00000556548 IL37Q9NZH6 218 aa18.77■□□□□ 0.6
SDR39U1-220ENST00000556548 ACTL7BQ9Y614 415 aa18.77■□□□□ 0.6
SDR39U1-220ENST00000556548 FAM47DPA6NHR8 397 aa18.77■□□□□ 0.59
SDR39U1-220ENST00000556548 INHBAP08476 426 aa18.77■□□□□ 0.59
SDR39U1-220ENST00000556548 NFKB1P19838 968 aa18.77■□□□□ 0.59
SDR39U1-220ENST00000556548 DRD4P21917 467 aa18.77■□□□□ 0.59
SDR39U1-220ENST00000556548 STX2P32856 288 aa18.77■□□□□ 0.59
SDR39U1-220ENST00000556548 RPA3P35244 121 aaPredicted RBP18.77■□□□□ 0.59
SDR39U1-220ENST00000556548 NUMBP49757 651 aa18.77■□□□□ 0.59
SDR39U1-220ENST00000556548 USP41Q3LFD5 358 aa18.77■□□□□ 0.59
SDR39U1-220ENST00000556548 MANEALQ5VSG8 457 aa18.77■□□□□ 0.59
SDR39U1-220ENST00000556548 CNKSR3Q6P9H4 555 aa18.77■□□□□ 0.59
SDR39U1-220ENST00000556548 CCDC91Q7Z6B0 441 aa18.77■□□□□ 0.59
SDR39U1-220ENST00000556548 TFAP2DQ7Z6R9 452 aa18.77■□□□□ 0.59
SDR39U1-220ENST00000556548 ARHGAP12Q8IWW6 846 aa18.77■□□□□ 0.59
SDR39U1-220ENST00000556548 SLC39A8Q9C0K1 460 aa18.77■□□□□ 0.59
SDR39U1-220ENST00000556548 TLR8Q9NR97 1041 aaKnown RBP18.77■□□□□ 0.59
SDR39U1-220ENST00000556548 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.77■□□□□ 0.59
SDR39U1-220ENST00000556548 IGSF9Q9P2J2 1179 aa18.77■□□□□ 0.59
SDR39U1-220ENST00000556548 TANC1Q9C0D5 1861 aa18.76■□□□□ 0.59
SDR39U1-220ENST00000556548 RTN3O95197 1032 aaPredicted RBP18.76■□□□□ 0.59
SDR39U1-220ENST00000556548 APOEP02649 317 aa18.76■□□□□ 0.59
SDR39U1-220ENST00000556548 DEFB103AP81534 67 aa18.76■□□□□ 0.59
SDR39U1-220ENST00000556548 TEX44Q53QW1 395 aa18.76■□□□□ 0.59
SDR39U1-220ENST00000556548 MSANTD2Q6P1R3 559 aa18.76■□□□□ 0.59
SDR39U1-220ENST00000556548 LRRC8BQ6P9F7 803 aa18.76■□□□□ 0.59
SDR39U1-220ENST00000556548 SUGP1Q8IWZ8 645 aaKnown RBP18.76■□□□□ 0.59
SDR39U1-220ENST00000556548 OR52K1Q8NGK4 314 aa18.76■□□□□ 0.59
SDR39U1-220ENST00000556548 SLC39A13Q96H72 371 aa18.76■□□□□ 0.59
SDR39U1-220ENST00000556548 IGSF21Q96ID5 467 aa18.76■□□□□ 0.59
SDR39U1-220ENST00000556548 PAWRQ96IZ0 340 aaKnown RBP18.76■□□□□ 0.59
SDR39U1-220ENST00000556548 APOL2Q9BQE5 337 aa18.76■□□□□ 0.59
SDR39U1-220ENST00000556548 CATSPERBQ9H7T0 1116 aa18.76■□□□□ 0.59
SDR39U1-220ENST00000556548 PPCSQ9HAB8 311 aa18.76■□□□□ 0.59
SDR39U1-220ENST00000556548 MARCH2Q9P0N8 246 aa18.76■□□□□ 0.59
SDR39U1-220ENST00000556548 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.75■□□□□ 0.59
SDR39U1-220ENST00000556548 SLC12A8A0AV02 714 aa18.75■□□□□ 0.59
SDR39U1-220ENST00000556548 SRRM3A6NNA2 597 aaPredicted RBP18.75■□□□□ 0.59
SDR39U1-220ENST00000556548 SPAG6O75602 509 aa18.75■□□□□ 0.59
SDR39U1-220ENST00000556548 PARNO95453 639 aaKnown RBP18.75■□□□□ 0.59
SDR39U1-220ENST00000556548 C1QAP02745 245 aa18.75■□□□□ 0.59
SDR39U1-220ENST00000556548 MLLT6P55198 1093 aaPredicted RBP18.75■□□□□ 0.59
SDR39U1-220ENST00000556548 LRRC26Q2I0M4 334 aa18.75■□□□□ 0.59
SDR39U1-220ENST00000556548 CES3Q6UWW8 571 aa18.75■□□□□ 0.59
SDR39U1-220ENST00000556548 OTOP3Q7RTS5 596 aa18.75■□□□□ 0.59
SDR39U1-220ENST00000556548 ATPAF2Q8N5M1 289 aa18.75■□□□□ 0.59
SDR39U1-220ENST00000556548 SLC44A1Q8WWI5 657 aa18.75■□□□□ 0.59
SDR39U1-220ENST00000556548 LRRC39Q96DD0 335 aa18.75■□□□□ 0.59
SDR39U1-220ENST00000556548 STAMBPL1Q96FJ0 436 aa18.75■□□□□ 0.59
SDR39U1-220ENST00000556548 C12orf65Q9H3J6 166 aaKnown RBP18.75■□□□□ 0.59
SDR39U1-220ENST00000556548 WBP1LQ9NX94 342 aa18.75■□□□□ 0.59
SDR39U1-220ENST00000556548 FETUBQ9UGM5 382 aa18.75■□□□□ 0.59
SDR39U1-220ENST00000556548 FAM92AA1XBS5 289 aa18.75■□□□□ 0.59
SDR39U1-220ENST00000556548 SDR42E2A6NKP2 422 aa18.75■□□□□ 0.59
SDR39U1-220ENST00000556548 SLC38A8A6NNN8 435 aa18.75■□□□□ 0.59
SDR39U1-220ENST00000556548 TCP11X1B4DZS4 312 aa18.75■□□□□ 0.59
SDR39U1-220ENST00000556548 CLTBP09497 229 aa18.75■□□□□ 0.59
SDR39U1-220ENST00000556548 CA4P22748 312 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms