RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 PCDHGB2Q9Y5G2 931 aa6.11□□□□□ -1.43
PRKCH-220ENST00000556164 GPC6Q9Y625 555 aaPredicted RBP6.11□□□□□ -1.43
PRKCH-220ENST00000556164 SMG1Q96Q15 3661 aaKnown RBP6.11□□□□□ -1.43
PRKCH-220ENST00000556164 A0A087WV48 116 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 LRRIQ3A6PVS8 624 aaPredicted RBP6.1□□□□□ -1.43
PRKCH-220ENST00000556164 TK2O00142 265 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 NPC1O15118 1278 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 TNFSF14O43557 240 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 EXOC3O60645 756 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 STC2O76061 302 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 KIF20AO95235 890 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 PENKP01210 267 aaPredicted RBP6.1□□□□□ -1.43
PRKCH-220ENST00000556164 IGLV3-19P01714 112 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 CYBBP04839 570 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 EPHX1P07099 455 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 HMBSP08397 361 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 HLA-EP13747 358 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 TRIM21P19474 475 aaKnown RBP6.1□□□□□ -1.43
PRKCH-220ENST00000556164 PDCP20941 246 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 ACO1P21399 889 aaKnown RBP6.1□□□□□ -1.43
PRKCH-220ENST00000556164 PRKCHP24723 683 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 CORO1AP31146 461 aaKnown RBP6.1□□□□□ -1.43
PRKCH-220ENST00000556164 CHKAP35790 457 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 GRK6P43250 576 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 ZNF132P52740 706 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 COPAP53621 1224 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 SNRPFP62306 86 aaKnown RBP6.1□□□□□ -1.43
PRKCH-220ENST00000556164 IL9RQ01113 521 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 C19orf57Q0VDD7 668 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 MMRN1Q13201 1228 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 ENPP2Q13822 863 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 SEPT6Q14141 434 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 ZNF234Q14588 700 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 E2F5Q15329 346 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 BMT2Q1RMZ1 405 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 KIF19Q2TAC6 998 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 GFOD2Q3B7J2 385 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 GRAMD1BQ3KR37 738 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 FYB2Q5VWT5 728 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 KLHDC10Q6PID8 442 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 DHRS13Q6UX07 377 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 LAYNQ6UX15 382 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 SERPINA13PQ6UXR4 307 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 CLEC20AQ6ZU45 233 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 ANKS1BQ7Z6G8 1248 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 TADA2BQ86TJ2 420 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 ANKK1Q8NFD2 765 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 ENGASEQ8NFI3 743 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 PIP4K2CQ8TBX8 421 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 ZNF507Q8TCN5 953 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 PLEKHO2Q8TD55 490 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 SORCS1Q8WY21 1168 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 DHX58Q96C10 678 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 P2RY11Q96G91 374 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 USP28Q96RU2 1077 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 UBL7Q96S82 380 aaPredicted RBP6.1□□□□□ -1.43
PRKCH-220ENST00000556164 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.1□□□□□ -1.43
PRKCH-220ENST00000556164 C6orf106Q9H6K1 298 aaPredicted RBP6.1□□□□□ -1.43
PRKCH-220ENST00000556164 CSNK1G1Q9HCP0 422 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 INTS7Q9NVH2 962 aaKnown RBP6.1□□□□□ -1.43
PRKCH-220ENST00000556164 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.1□□□□□ -1.43
PRKCH-220ENST00000556164 ELOVL2Q9NXB9 296 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 FTSJ1Q9UET6 329 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 PFDN2Q9UHV9 154 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 RASAL2Q9UJF2 1139 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 FBXO10Q9UK96 956 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 ZNF510Q9Y2H8 683 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 SLC27A6Q9Y2P4 619 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 SPEF1Q9Y4P9 236 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 PCDHA5Q9Y5H7 936 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 SNX11Q9Y5W9 270 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 SLCO1B1Q9Y6L6 691 aa6.1□□□□□ -1.43
PRKCH-220ENST00000556164 COL5A1P20908 1838 aaPredicted RBP6.1□□□□□ -1.43
PRKCH-220ENST00000556164 GCN1Q92616 2671 aaKnown RBP6.1□□□□□ -1.43
PRKCH-220ENST00000556164 HHLA1C9JL84 531 aa6.09□□□□□ -1.43
PRKCH-220ENST00000556164 PLK4O00444 970 aa6.09□□□□□ -1.43
PRKCH-220ENST00000556164 KCNK3O14649 394 aa6.09□□□□□ -1.43
PRKCH-220ENST00000556164 STX6O43752 255 aa6.09□□□□□ -1.43
PRKCH-220ENST00000556164 RFPL1O75677 317 aa6.09□□□□□ -1.43
PRKCH-220ENST00000556164 FSBPO95073 299 aa6.09□□□□□ -1.43
PRKCH-220ENST00000556164 VNN1O95497 513 aa6.09□□□□□ -1.43
PRKCH-220ENST00000556164 KLKB1P03952 638 aa6.09□□□□□ -1.43
PRKCH-220ENST00000556164 C4BPAP04003 597 aaKnown RBP6.09□□□□□ -1.43
PRKCH-220ENST00000556164 RALAP11233 206 aa6.09□□□□□ -1.43
PRKCH-220ENST00000556164 ACSL1P33121 698 aa6.09□□□□□ -1.43
PRKCH-220ENST00000556164 PIK3CAP42336 1068 aa6.09□□□□□ -1.43
PRKCH-220ENST00000556164 GRIA4P48058 902 aa6.09□□□□□ -1.43
PRKCH-220ENST00000556164 CCT8P50990 548 aa6.09□□□□□ -1.43
PRKCH-220ENST00000556164 AP3M2P53677 418 aa6.09□□□□□ -1.43
PRKCH-220ENST00000556164 EFEMP1Q12805 493 aa6.09□□□□□ -1.43
PRKCH-220ENST00000556164 SLC39A14Q15043 492 aa6.09□□□□□ -1.43
PRKCH-220ENST00000556164 EIF4HQ15056 248 aaKnown RBP6.09□□□□□ -1.43
PRKCH-220ENST00000556164 STK38Q15208 465 aa6.09□□□□□ -1.43
PRKCH-220ENST00000556164 SMAD1Q15797 465 aaKnown RBP6.09□□□□□ -1.43
PRKCH-220ENST00000556164 INAVAQ3KP66 663 aa6.09□□□□□ -1.43
PRKCH-220ENST00000556164 FNDC3BQ53EP0 1204 aaKnown RBP6.09□□□□□ -1.43
PRKCH-220ENST00000556164 C10orf62Q5T681 223 aaPredicted RBP6.09□□□□□ -1.43
PRKCH-220ENST00000556164 SPOPLQ6IQ16 392 aa6.09□□□□□ -1.43
PRKCH-220ENST00000556164 DBX2Q6ZNG2 339 aa6.09□□□□□ -1.43
PRKCH-220ENST00000556164 ADAT2Q7Z6V5 191 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms