RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 TXNRD2Q9NNW7 524 aa4.06□□□□□ -1.76
SNX6-204ENST00000555541 KCNK9Q9NPC2 374 aa4.06□□□□□ -1.76
SNX6-204ENST00000555541 ZMYND8Q9ULU4 1186 aaPredicted RBP4.06□□□□□ -1.76
SNX6-204ENST00000555541 OR6C75A6NL08 312 aa4.05□□□□□ -1.76
SNX6-204ENST00000555541 SRRM3A6NNA2 597 aaPredicted RBP4.05□□□□□ -1.76
SNX6-204ENST00000555541 I6L893 689 aaPredicted RBP4.05□□□□□ -1.76
SNX6-204ENST00000555541 APOL1O14791 398 aa4.05□□□□□ -1.76
SNX6-204ENST00000555541 SPRY3O43610 288 aa4.05□□□□□ -1.76
SNX6-204ENST00000555541 CAMTA2O94983 1202 aa4.05□□□□□ -1.76
SNX6-204ENST00000555541 PKMP14618 531 aaKnown RBP4.05□□□□□ -1.76
SNX6-204ENST00000555541 IDEP14735 1019 aa4.05□□□□□ -1.76
SNX6-204ENST00000555541 CPA1P15085 419 aa4.05□□□□□ -1.76
SNX6-204ENST00000555541 ARSBP15848 533 aa4.05□□□□□ -1.76
SNX6-204ENST00000555541 TGM2P21980 687 aa4.05□□□□□ -1.76
SNX6-204ENST00000555541 PCYT1AP49585 367 aa4.05□□□□□ -1.76
SNX6-204ENST00000555541 COMPP49747 757 aaPredicted RBP4.05□□□□□ -1.76
SNX6-204ENST00000555541 ERVFC1-1P60608 527 aa4.05□□□□□ -1.76
SNX6-204ENST00000555541 PRAMEF19Q5SWL8 479 aa4.05□□□□□ -1.76
SNX6-204ENST00000555541 LRIG3Q6UXM1 1119 aa4.05□□□□□ -1.76
SNX6-204ENST00000555541 KRTAP5-2Q701N4 177 aa4.05□□□□□ -1.76
SNX6-204ENST00000555541 C16orf82Q7Z2V1 217 aa4.05□□□□□ -1.76
SNX6-204ENST00000555541 ADGRF3Q8IZF5 1079 aa4.05□□□□□ -1.76
SNX6-204ENST00000555541 KDM1BQ8NB78 822 aa4.05□□□□□ -1.76
SNX6-204ENST00000555541 ADAMTS14Q8WXS8 1223 aa4.05□□□□□ -1.76
SNX6-204ENST00000555541 PAAF1Q9BRP4 392 aa4.05□□□□□ -1.76
SNX6-204ENST00000555541 ABHD14AQ9BUJ0 271 aa4.05□□□□□ -1.76
SNX6-204ENST00000555541 SEZ6LQ9BYH1 1024 aa4.05□□□□□ -1.76
SNX6-204ENST00000555541 C6orf106Q9H6K1 298 aaPredicted RBP4.05□□□□□ -1.76
SNX6-204ENST00000555541 FSCN3Q9NQT6 498 aa4.05□□□□□ -1.76
SNX6-204ENST00000555541 TBC1D14Q9P2M4 693 aa4.05□□□□□ -1.76
SNX6-204ENST00000555541 KCNG2Q9UJ96 466 aa4.05□□□□□ -1.76
SNX6-204ENST00000555541 LMTK3Q96Q04 1460 aa4.05□□□□□ -1.76
SNX6-204ENST00000555541 NDST3O95803 873 aa4.04□□□□□ -1.76
SNX6-204ENST00000555541 VIPP01282 170 aa4.04□□□□□ -1.76
SNX6-204ENST00000555541 PECAM1P16284 738 aaPredicted RBP4.04□□□□□ -1.76
SNX6-204ENST00000555541 EGR1P18146 543 aa4.04□□□□□ -1.76
SNX6-204ENST00000555541 HOXD3P31249 432 aaPredicted RBP4.04□□□□□ -1.76
SNX6-204ENST00000555541 GSTM5P46439 218 aa4.04□□□□□ -1.76
SNX6-204ENST00000555541 POLE2P56282 527 aa4.04□□□□□ -1.76
SNX6-204ENST00000555541 ARHGAP15Q53QZ3 475 aa4.04□□□□□ -1.76
SNX6-204ENST00000555541 Q6ZTK2 550 aa4.04□□□□□ -1.76
SNX6-204ENST00000555541 GRAMD1AQ96CP6 724 aa4.04□□□□□ -1.76
SNX6-204ENST00000555541 WDR77Q9BQA1 342 aaPredicted RBP4.04□□□□□ -1.76
SNX6-204ENST00000555541 SARGQ9BW04 601 aa4.04□□□□□ -1.76
SNX6-204ENST00000555541 STARD7Q9NQZ5 370 aa4.04□□□□□ -1.76
SNX6-204ENST00000555541 FAM50BQ9Y247 325 aa4.04□□□□□ -1.76
SNX6-204ENST00000555541 NPC1O15118 1278 aa4.03□□□□□ -1.76
SNX6-204ENST00000555541 ZNF12P17014 697 aa4.03□□□□□ -1.76
SNX6-204ENST00000555541 IGFBP2P18065 325 aa4.03□□□□□ -1.76
SNX6-204ENST00000555541 ART1P52961 327 aa4.03□□□□□ -1.76
SNX6-204ENST00000555541 SELENOVP59797 346 aa4.03□□□□□ -1.76
SNX6-204ENST00000555541 SHC2P98077 582 aa4.03□□□□□ -1.76
SNX6-204ENST00000555541 IFIT5Q13325 482 aaKnown RBP4.03□□□□□ -1.76
SNX6-204ENST00000555541 COBLL1Q53SF7 1204 aa4.03□□□□□ -1.76
SNX6-204ENST00000555541 FAM76BQ5HYJ3 339 aa4.03□□□□□ -1.76
SNX6-204ENST00000555541 ENTPD8Q5MY95 495 aa4.03□□□□□ -1.76
SNX6-204ENST00000555541 C9orf57Q5W0N0 161 aa4.03□□□□□ -1.76
SNX6-204ENST00000555541 CLIP4Q8N3C7 705 aa4.03□□□□□ -1.76
SNX6-204ENST00000555541 GLIS1Q8NBF1 620 aa4.03□□□□□ -1.76
SNX6-204ENST00000555541 GABPB2Q8TAK5 448 aaPredicted RBP4.03□□□□□ -1.76
SNX6-204ENST00000555541 TBCBQ99426 244 aa4.03□□□□□ -1.76
SNX6-204ENST00000555541 EIF2AQ9BY44 585 aaKnown RBP4.03□□□□□ -1.76
SNX6-204ENST00000555541 TM6SF1Q9BZW5 370 aa4.03□□□□□ -1.76
SNX6-204ENST00000555541 PRDM16Q9HAZ2 1276 aa4.03□□□□□ -1.76
SNX6-204ENST00000555541 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.03□□□□□ -1.76
SNX6-204ENST00000555541 RGL1Q9NZL6 768 aa4.03□□□□□ -1.76
SNX6-204ENST00000555541 MAN2B2Q9Y2E5 1009 aa4.03□□□□□ -1.76
SNX6-204ENST00000555541 PCDHGB1Q9Y5G3 927 aa4.03□□□□□ -1.76
SNX6-204ENST00000555541 SMTNL1A8MU46 457 aa4.02□□□□□ -1.77
SNX6-204ENST00000555541 BTBD18B2RXH4 712 aa4.02□□□□□ -1.77
SNX6-204ENST00000555541 CYP1A2P05177 515 aa4.02□□□□□ -1.77
SNX6-204ENST00000555541 NSUN2Q08J23 767 aaKnown RBP eCLIP4.02□□□□□ -1.77
SNX6-204ENST00000555541 PMS2P11Q13670 270 aa4.02□□□□□ -1.77
SNX6-204ENST00000555541 SAFBQ15424 915 aaKnown RBP eCLIP4.02□□□□□ -1.77
SNX6-204ENST00000555541 MAPKAPK3Q16644 382 aa4.02□□□□□ -1.77
SNX6-204ENST00000555541 DUSP6Q16828 381 aa4.02□□□□□ -1.77
SNX6-204ENST00000555541 ARL13BQ3SXY8 428 aa4.02□□□□□ -1.77
SNX6-204ENST00000555541 HIBCHQ6NVY1 386 aaPredicted RBP4.02□□□□□ -1.77
SNX6-204ENST00000555541 PMM1Q92871 262 aa4.02□□□□□ -1.77
SNX6-204ENST00000555541 EIF3CQ99613 913 aaKnown RBP4.02□□□□□ -1.77
SNX6-204ENST00000555541 CDT1Q9H211 546 aa4.02□□□□□ -1.77
SNX6-204ENST00000555541 KRCC1Q9NPI7 259 aaPredicted RBP4.02□□□□□ -1.77
SNX6-204ENST00000555541 ICAM5Q9UMF0 924 aa4.02□□□□□ -1.77
SNX6-204ENST00000555541 FAM234BA2RU67 622 aa4.01□□□□□ -1.77
SNX6-204ENST00000555541 CXorf65A6NEN9 183 aa4.01□□□□□ -1.77
SNX6-204ENST00000555541 APAF1O14727 1248 aa4.01□□□□□ -1.77
SNX6-204ENST00000555541 PMM2O15305 246 aa4.01□□□□□ -1.77
SNX6-204ENST00000555541 TAF5LO75529 589 aa4.01□□□□□ -1.77
SNX6-204ENST00000555541 ZBTB11O95625 1053 aaPredicted RBP4.01□□□□□ -1.77
SNX6-204ENST00000555541 NFATC1O95644 943 aa4.01□□□□□ -1.77
SNX6-204ENST00000555541 GLUD1P00367 558 aa4.01□□□□□ -1.77
SNX6-204ENST00000555541 HARSP12081 509 aaKnown RBP4.01□□□□□ -1.77
SNX6-204ENST00000555541 TRIM27P14373 513 aa4.01□□□□□ -1.77
SNX6-204ENST00000555541 GLUD2P49448 558 aa4.01□□□□□ -1.77
SNX6-204ENST00000555541 PMS2P54278 862 aa4.01□□□□□ -1.77
SNX6-204ENST00000555541 P3H1Q32P28 736 aa4.01□□□□□ -1.77
SNX6-204ENST00000555541 CYB5R4Q7L1T6 521 aa4.01□□□□□ -1.77
SNX6-204ENST00000555541 MDGA2Q7Z553 956 aa4.01□□□□□ -1.77
SNX6-204ENST00000555541 TXLNBQ8N3L3 684 aa4.01□□□□□ -1.77
SNX6-204ENST00000555541 SLC22A17Q8WUG5 538 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms