RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 UNC45BQ8IWX7 931 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 KLHL7Q8IXQ5 586 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 DDI1Q8WTU0 396 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 FAM172AQ8WUF8 416 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 IFT81Q8WYA0 676 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 CHFRQ96EP1 664 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 TRIM11Q96F44 468 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 VCPIP1Q96JH7 1222 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 NPY6RQ99463 290 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 BBS2Q9BXC9 721 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 TKTL2Q9H0I9 626 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 TBC1D17Q9HA65 648 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 OSGEPQ9NPF4 335 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 SPHK2Q9NRA0 654 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 FAM114A2Q9NRY5 505 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 UVRAGQ9P2Y5 699 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 WNT16Q9UBV4 365 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 COL4A2P08572 1712 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 FAM187AA6NFU0 413 aa10.18□□□□□ -0.78
PSEN1-213ENST00000555386 ACSL4O60488 711 aa10.18□□□□□ -0.78
PSEN1-213ENST00000555386 IGLV3-25P01717 112 aa10.18□□□□□ -0.78
PSEN1-213ENST00000555386 CYP1A2P05177 515 aa10.18□□□□□ -0.78
PSEN1-213ENST00000555386 MYBL1P10243 752 aa10.18□□□□□ -0.78
PSEN1-213ENST00000555386 SLC6A4P31645 630 aa10.18□□□□□ -0.78
PSEN1-213ENST00000555386 CCR1P32246 355 aa10.18□□□□□ -0.78
PSEN1-213ENST00000555386 CTHP32929 405 aa10.18□□□□□ -0.78
PSEN1-213ENST00000555386 GJA4P35212 333 aa10.18□□□□□ -0.78
PSEN1-213ENST00000555386 NUMBP49757 651 aa10.18□□□□□ -0.78
PSEN1-213ENST00000555386 OGDHQ02218 1023 aa10.18□□□□□ -0.78
PSEN1-213ENST00000555386 DHX34Q14147 1143 aaKnown RBP10.18□□□□□ -0.78
PSEN1-213ENST00000555386 EMC10Q5UCC4 262 aa10.18□□□□□ -0.78
PSEN1-213ENST00000555386 DAB2IPQ5VWQ8 1189 aa10.18□□□□□ -0.78
PSEN1-213ENST00000555386 CHSY1Q86X52 802 aa10.18□□□□□ -0.78
PSEN1-213ENST00000555386 CFAP52Q8N1V2 620 aa10.18□□□□□ -0.78
PSEN1-213ENST00000555386 ATP6V0D2Q8N8Y2 350 aa10.18□□□□□ -0.78
PSEN1-213ENST00000555386 TSEN2Q8NCE0 465 aaKnown RBP10.18□□□□□ -0.78
PSEN1-213ENST00000555386 FAM3CQ92520 227 aa10.18□□□□□ -0.78
PSEN1-213ENST00000555386 PBXIP1Q96AQ6 731 aa10.18□□□□□ -0.78
PSEN1-213ENST00000555386 SLC39A13Q96H72 371 aa10.18□□□□□ -0.78
PSEN1-213ENST00000555386 RUNDC3BQ96NL0 473 aa10.18□□□□□ -0.78
PSEN1-213ENST00000555386 NUP85Q9BW27 656 aa10.18□□□□□ -0.78
PSEN1-213ENST00000555386 RAB17Q9H0T7 212 aa10.18□□□□□ -0.78
PSEN1-213ENST00000555386 GOLPH3Q9H4A6 298 aa10.18□□□□□ -0.78
PSEN1-213ENST00000555386 WDCPQ9H6R7 721 aa10.18□□□□□ -0.78
PSEN1-213ENST00000555386 RRN3Q9NYV6 651 aa10.18□□□□□ -0.78
PSEN1-213ENST00000555386 CTTNBP2NLQ9P2B4 639 aa10.18□□□□□ -0.78
PSEN1-213ENST00000555386 SLC12A6Q9UHW9 1150 aa10.18□□□□□ -0.78
PSEN1-213ENST00000555386 ZNF510Q9Y2H8 683 aa10.18□□□□□ -0.78
PSEN1-213ENST00000555386 MTF2Q9Y483 593 aaPredicted RBP10.18□□□□□ -0.78
PSEN1-213ENST00000555386 SCINQ9Y6U3 715 aa10.18□□□□□ -0.78
PSEN1-213ENST00000555386 TCRBV5S1A1TA0A578 114 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 FAM170BA6NMN3 283 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 TRIM24O15164 1050 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 TBL1XO60907 577 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 F9P00740 461 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 IGLV3-27P01718 113 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 FGGP02679 453 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 CYBBP04839 570 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 DCNP07585 359 aaKnown RBP10.17□□□□□ -0.78
PSEN1-213ENST00000555386 TYRP14679 529 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 DESP17661 470 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 RDXP35241 583 aaKnown RBP10.17□□□□□ -0.78
PSEN1-213ENST00000555386 CHKAP35790 457 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 SSR1P43307 286 aaKnown RBP10.17□□□□□ -0.78
PSEN1-213ENST00000555386 SGSHP51688 502 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 HNRNPH2P55795 449 aaKnown RBP10.17□□□□□ -0.78
PSEN1-213ENST00000555386 MRPS25P82663 173 aaKnown RBP10.17□□□□□ -0.78
PSEN1-213ENST00000555386 SKOR1P84550 965 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 GAD2Q05329 585 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 RING1Q06587 406 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 ADGRF1Q5T601 910 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 NADSYN1Q6IA69 706 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 PLEKHA7Q6IQ23 1121 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 ZNF852Q6ZMS4 543 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 C12orf40Q86WS4 652 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 CIR1Q86X95 450 aaPredicted RBP10.17□□□□□ -0.78
PSEN1-213ENST00000555386 LGI2Q8N0V4 545 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 MYEOVQ96EZ4 313 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 SHDQ96IW2 340 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 ZIM3Q96PE6 472 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 AP1M1Q9BXS5 423 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 C8orf33Q9H7E9 229 aaPredicted RBP10.17□□□□□ -0.78
PSEN1-213ENST00000555386 FBRSL1Q9HCM7 1045 aaKnown RBP10.17□□□□□ -0.78
PSEN1-213ENST00000555386 MRPL47Q9HD33 250 aaKnown RBP10.17□□□□□ -0.78
PSEN1-213ENST00000555386 ANLNQ9NQW6 1124 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 DNAJC17Q9NVM6 304 aaKnown RBP10.17□□□□□ -0.78
PSEN1-213ENST00000555386 PCSK1NQ9UHG2 260 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 ANAPC7Q9UJX3 599 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 UTP11Q9Y3A2 253 aaKnown RBP10.17□□□□□ -0.78
PSEN1-213ENST00000555386 ALG6Q9Y672 507 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 ESYT3A0FGR9 886 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 ZSCAN5CA6NGD5 496 aaPredicted RBP10.17□□□□□ -0.78
PSEN1-213ENST00000555386 KCNU1A8MYU2 1149 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 PAGE1O75459 146 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 FAM153BP0C7A2 387 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 SLC2A3P11169 496 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 TACR2P21452 398 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 CTNNA2P26232 953 aa10.17□□□□□ -0.78
PSEN1-213ENST00000555386 TARSP26639 723 aaKnown RBP10.17□□□□□ -0.78
PSEN1-213ENST00000555386 ECHS1P30084 290 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms