RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 H3BRJ5 948 aa13.05□□□□□ -0.32
SYNE2-219ENST00000555323 EEF2KO00418 725 aaKnown RBP13.05□□□□□ -0.32
SYNE2-219ENST00000555323 FGF10O15520 208 aaPredicted RBP13.05□□□□□ -0.32
SYNE2-219ENST00000555323 CD48P09326 243 aa13.05□□□□□ -0.32
SYNE2-219ENST00000555323 GOT1P17174 413 aa13.05□□□□□ -0.32
SYNE2-219ENST00000555323 HLA-FP30511 346 aa13.05□□□□□ -0.32
SYNE2-219ENST00000555323 ARL4AP40617 200 aa13.05□□□□□ -0.32
SYNE2-219ENST00000555323 MAPKAPK2P49137 400 aa13.05□□□□□ -0.32
SYNE2-219ENST00000555323 DGKGP49619 791 aa13.05□□□□□ -0.32
SYNE2-219ENST00000555323 CDH6P55285 790 aa13.05□□□□□ -0.32
SYNE2-219ENST00000555323 TPI1P60174 286 aa13.05□□□□□ -0.32
SYNE2-219ENST00000555323 ZNF177Q13360 481 aaPredicted RBP13.05□□□□□ -0.32
SYNE2-219ENST00000555323 SLC12A1Q13621 1099 aa13.05□□□□□ -0.32
SYNE2-219ENST00000555323 DPYSQ14117 519 aa13.05□□□□□ -0.32
SYNE2-219ENST00000555323 DPYSL3Q14195 570 aa13.05□□□□□ -0.32
SYNE2-219ENST00000555323 PPP6R3Q5H9R7 873 aaPredicted RBP13.05□□□□□ -0.32
SYNE2-219ENST00000555323 FSCBQ5H9T9 825 aa13.05□□□□□ -0.32
SYNE2-219ENST00000555323 MEI1Q5TIA1 1274 aa13.05□□□□□ -0.32
SYNE2-219ENST00000555323 ASTLQ6HA08 431 aaPredicted RBP13.05□□□□□ -0.32
SYNE2-219ENST00000555323 CXorf57Q6NSI4 855 aaKnown RBP13.05□□□□□ -0.32
SYNE2-219ENST00000555323 ZNF852Q6ZMS4 543 aa13.05□□□□□ -0.32
SYNE2-219ENST00000555323 ZNF783Q6ZMS7 281 aa13.05□□□□□ -0.32
SYNE2-219ENST00000555323 TRIM67Q6ZTA4 783 aa13.05□□□□□ -0.32
SYNE2-219ENST00000555323 TPRG1Q6ZUI0 275 aa13.05□□□□□ -0.32
SYNE2-219ENST00000555323 MFN1Q8IWA4 741 aa13.05□□□□□ -0.32
SYNE2-219ENST00000555323 RCOR2Q8IZ40 523 aa13.05□□□□□ -0.32
SYNE2-219ENST00000555323 RTL3Q8N8U3 475 aaKnown RBP13.05□□□□□ -0.32
SYNE2-219ENST00000555323 EXD1Q8NHP7 514 aa13.05□□□□□ -0.32
SYNE2-219ENST00000555323 KRT35Q92764 455 aa13.05□□□□□ -0.32
SYNE2-219ENST00000555323 BHMTQ93088 406 aa13.05□□□□□ -0.32
SYNE2-219ENST00000555323 ALG14Q96F25 216 aa13.05□□□□□ -0.32
SYNE2-219ENST00000555323 CSPG4P5Q96PW8 444 aa13.05□□□□□ -0.32
SYNE2-219ENST00000555323 ALS2CR12Q96Q35 445 aa13.05□□□□□ -0.32
SYNE2-219ENST00000555323 ZNF670Q9BS34 389 aa13.05□□□□□ -0.32
SYNE2-219ENST00000555323 OSBPL6Q9BZF3 934 aa13.05□□□□□ -0.32
SYNE2-219ENST00000555323 PRDM16Q9HAZ2 1276 aa13.05□□□□□ -0.32
SYNE2-219ENST00000555323 DNAJC17Q9NVM6 304 aaKnown RBP13.05□□□□□ -0.32
SYNE2-219ENST00000555323 KIAA1522Q9P206 1035 aaPredicted RBP13.05□□□□□ -0.32
SYNE2-219ENST00000555323 FBXL21Q9UKT6 434 aa13.05□□□□□ -0.32
SYNE2-219ENST00000555323 CA14Q9ULX7 337 aa13.05□□□□□ -0.32
SYNE2-219ENST00000555323 STARD13Q9Y3M8 1113 aa13.05□□□□□ -0.32
SYNE2-219ENST00000555323 MYOFQ9NZM1 2061 aa13.04□□□□□ -0.32
SYNE2-219ENST00000555323 KANSL1LA0AUZ9 987 aa13.04□□□□□ -0.32
SYNE2-219ENST00000555323 H0Y626 953 aa13.04□□□□□ -0.32
SYNE2-219ENST00000555323 DCLK1O15075 740 aa13.04□□□□□ -0.32
SYNE2-219ENST00000555323 TRIM24O15164 1050 aa13.04□□□□□ -0.32
SYNE2-219ENST00000555323 DDX3YO15523 660 aaKnown RBP13.04□□□□□ -0.32
SYNE2-219ENST00000555323 TIMM44O43615 452 aa13.04□□□□□ -0.32
SYNE2-219ENST00000555323 ZRANB2O95218 330 aaKnown RBP eCLIP13.04□□□□□ -0.32
SYNE2-219ENST00000555323 ERCC2P18074 760 aa13.04□□□□□ -0.32
SYNE2-219ENST00000555323 DRD1P21728 446 aa13.04□□□□□ -0.32
SYNE2-219ENST00000555323 GRIA2P42262 883 aa13.04□□□□□ -0.32
SYNE2-219ENST00000555323 TNFRSF4P43489 277 aa13.04□□□□□ -0.32
SYNE2-219ENST00000555323 MESP2Q0VG99 397 aa13.04□□□□□ -0.32
SYNE2-219ENST00000555323 FZD5Q13467 585 aa13.04□□□□□ -0.32
SYNE2-219ENST00000555323 KRT81Q14533 505 aa13.04□□□□□ -0.32
SYNE2-219ENST00000555323 DMC1Q14565 340 aa13.04□□□□□ -0.32
SYNE2-219ENST00000555323 C6orf118Q5T5N4 469 aa13.04□□□□□ -0.32
SYNE2-219ENST00000555323 NAIF1Q69YI7 327 aaPredicted RBP13.04□□□□□ -0.32
SYNE2-219ENST00000555323 GRAMD4Q6IC98 578 aa13.04□□□□□ -0.32
SYNE2-219ENST00000555323 RWDD4Q6NW29 188 aaKnown RBP13.04□□□□□ -0.32
SYNE2-219ENST00000555323 NUDT18Q6ZVK8 323 aa13.04□□□□□ -0.32
SYNE2-219ENST00000555323 CIR1Q86X95 450 aaPredicted RBP13.04□□□□□ -0.32
SYNE2-219ENST00000555323 CCDC117Q8IWD4 279 aaPredicted RBP13.04□□□□□ -0.32
SYNE2-219ENST00000555323 SIX5Q8N196 739 aa13.04□□□□□ -0.32
SYNE2-219ENST00000555323 UMODL1-AS1Q8N2C9 162 aa13.04□□□□□ -0.32
SYNE2-219ENST00000555323 CARNMT1Q8N4J0 409 aa13.04□□□□□ -0.32
SYNE2-219ENST00000555323 OR52K2Q8NGK3 314 aa13.04□□□□□ -0.32
SYNE2-219ENST00000555323 WFDC5Q8TCV5 224 aa13.04□□□□□ -0.32
SYNE2-219ENST00000555323 KLC2Q9H0B6 622 aa13.04□□□□□ -0.32
SYNE2-219ENST00000555323 MRPS17Q9Y2R5 130 aaKnown RBP13.04□□□□□ -0.32
SYNE2-219ENST00000555323 OR51B4Q9Y5P0 310 aa13.04□□□□□ -0.32
SYNE2-219ENST00000555323 F5P12259 2224 aa13.04□□□□□ -0.32
SYNE2-219ENST00000555323 ILVBLA1L0T0 632 aa13.03□□□□□ -0.32
SYNE2-219ENST00000555323 K7EQS6 105 aa13.03□□□□□ -0.32
SYNE2-219ENST00000555323 KAT7O95251 611 aa13.03□□□□□ -0.32
SYNE2-219ENST00000555323 FTCDO95954 541 aa13.03□□□□□ -0.32
SYNE2-219ENST00000555323 PABPC1P11940 636 aaKnown RBP13.03□□□□□ -0.32
SYNE2-219ENST00000555323 AMPD1P23109 780 aa13.03□□□□□ -0.32
SYNE2-219ENST00000555323 OR1E1P30953 314 aa13.03□□□□□ -0.32
SYNE2-219ENST00000555323 MARCKSL1P49006 195 aa13.03□□□□□ -0.32
SYNE2-219ENST00000555323 RWDD2BP57060 319 aa13.03□□□□□ -0.32
SYNE2-219ENST00000555323 YBEYP58557 167 aaPredicted RBP13.03□□□□□ -0.32
SYNE2-219ENST00000555323 COPS2P61201 443 aa13.03□□□□□ -0.32
SYNE2-219ENST00000555323 GRSF1Q12849 480 aaKnown RBP eCLIP13.03□□□□□ -0.32
SYNE2-219ENST00000555323 LMAN2Q12907 356 aa13.03□□□□□ -0.32
SYNE2-219ENST00000555323 MMRN1Q13201 1228 aa13.03□□□□□ -0.32
SYNE2-219ENST00000555323 CDH18Q13634 790 aa13.03□□□□□ -0.32
SYNE2-219ENST00000555323 CCINQ13939 588 aa13.03□□□□□ -0.32
SYNE2-219ENST00000555323 PON2Q15165 354 aa13.03□□□□□ -0.32
SYNE2-219ENST00000555323 GEN1Q17RS7 908 aa13.03□□□□□ -0.32
SYNE2-219ENST00000555323 ANKRD20A8PQ5CZ79 823 aa13.03□□□□□ -0.32
SYNE2-219ENST00000555323 FSTL4Q6MZW2 842 aa13.03□□□□□ -0.32
SYNE2-219ENST00000555323 ADIPOR2Q86V24 386 aa13.03□□□□□ -0.32
SYNE2-219ENST00000555323 LZTR1Q8N653 840 aa13.03□□□□□ -0.32
SYNE2-219ENST00000555323 TERB1Q8NA31 727 aa13.03□□□□□ -0.32
SYNE2-219ENST00000555323 PCDH19Q8TAB3 1148 aa13.03□□□□□ -0.32
SYNE2-219ENST00000555323 KCNV2Q8TDN2 545 aa13.03□□□□□ -0.32
SYNE2-219ENST00000555323 WFIKKN2Q8TEU8 576 aa13.03□□□□□ -0.32
SYNE2-219ENST00000555323 ALG3Q92685 438 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms