RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 ITGAVP06756 1048 aa16.98■□□□□ 0.31
PCNX1-209ENST00000554879 SP100P23497 879 aaPredicted RBP16.98■□□□□ 0.31
PCNX1-209ENST00000554879 SLC5A3P53794 718 aa16.98■□□□□ 0.31
PCNX1-209ENST00000554879 VARS2Q5ST30 1063 aaKnown RBP16.98■□□□□ 0.31
PCNX1-209ENST00000554879 CCT6BQ92526 530 aa16.98■□□□□ 0.31
PCNX1-209ENST00000554879 MRPL9Q9BYD2 267 aaKnown RBP16.98■□□□□ 0.31
PCNX1-209ENST00000554879 FRMD8P1Q9BZ68 369 aaPredicted RBP16.98■□□□□ 0.31
PCNX1-209ENST00000554879 EBF2Q9HAK2 575 aa16.98■□□□□ 0.31
PCNX1-209ENST00000554879 CDY1Q9Y6F8 540 aa16.98■□□□□ 0.31
PCNX1-209ENST00000554879 TMEM120BA0PK00 339 aa16.98■□□□□ 0.31
PCNX1-209ENST00000554879 RNF103O00237 685 aa16.98■□□□□ 0.31
PCNX1-209ENST00000554879 COQ9O75208 318 aa16.98■□□□□ 0.31
PCNX1-209ENST00000554879 AVILO75366 819 aa16.98■□□□□ 0.31
PCNX1-209ENST00000554879 DAB1O75553 588 aa16.98■□□□□ 0.31
PCNX1-209ENST00000554879 OR1D2P34982 312 aa16.98■□□□□ 0.31
PCNX1-209ENST00000554879 ZBTB6Q15916 424 aa16.98■□□□□ 0.31
PCNX1-209ENST00000554879 AGBL2Q5U5Z8 902 aa16.98■□□□□ 0.31
PCNX1-209ENST00000554879 ITPRIPL1Q6GPH6 555 aa16.98■□□□□ 0.31
PCNX1-209ENST00000554879 PCDH19Q8TAB3 1148 aa16.98■□□□□ 0.31
PCNX1-209ENST00000554879 ATP2A3Q93084 1043 aa16.98■□□□□ 0.31
PCNX1-209ENST00000554879 KCTD15Q96SI1 283 aaPredicted RBP16.98■□□□□ 0.31
PCNX1-209ENST00000554879 SHOC2Q9UQ13 582 aa16.98■□□□□ 0.31
PCNX1-209ENST00000554879 E2F8A0AVK6 867 aa16.98■□□□□ 0.31
PCNX1-209ENST00000554879 KRT37O76014 449 aa16.98■□□□□ 0.31
PCNX1-209ENST00000554879 SLC12A2P55011 1212 aa16.98■□□□□ 0.31
PCNX1-209ENST00000554879 DAOAP59103 153 aa16.98■□□□□ 0.31
PCNX1-209ENST00000554879 TCEAL1Q15170 157 aa16.98■□□□□ 0.31
PCNX1-209ENST00000554879 RAPH1Q70E73 1250 aa16.98■□□□□ 0.31
PCNX1-209ENST00000554879 C17orf50Q8WW18 174 aa16.98■□□□□ 0.31
PCNX1-209ENST00000554879 SMOQ99835 787 aa16.98■□□□□ 0.31
PCNX1-209ENST00000554879 FOXP3Q9BZS1 431 aa16.98■□□□□ 0.31
PCNX1-209ENST00000554879 TYW5A2RUC4 315 aaKnown RBP16.97■□□□□ 0.31
PCNX1-209ENST00000554879 EOMESO95936 686 aa16.97■□□□□ 0.31
PCNX1-209ENST00000554879 ADRA1BP35368 520 aa16.97■□□□□ 0.31
PCNX1-209ENST00000554879 TUBP50607 506 aa16.97■□□□□ 0.31
PCNX1-209ENST00000554879 UPP1Q16831 310 aa16.97■□□□□ 0.31
PCNX1-209ENST00000554879 OTOP2Q7RTS6 562 aa16.97■□□□□ 0.31
PCNX1-209ENST00000554879 RYBPQ8N488 228 aaPredicted RBP16.97■□□□□ 0.31
PCNX1-209ENST00000554879 NIPA2Q8N8Q9 360 aa16.97■□□□□ 0.31
PCNX1-209ENST00000554879 LNPEPQ9UIQ6 1025 aa16.97■□□□□ 0.31
PCNX1-209ENST00000554879 MYO7AQ13402 2215 aa16.97■□□□□ 0.31
PCNX1-209ENST00000554879 GNRH1P01148 92 aa16.97■□□□□ 0.31
PCNX1-209ENST00000554879 ZDHHC24Q6UX98 284 aa16.97■□□□□ 0.31
PCNX1-209ENST00000554879 MREGQ8N565 214 aa16.97■□□□□ 0.31
PCNX1-209ENST00000554879 EIF1ADQ8N9N8 165 aaKnown RBP16.97■□□□□ 0.31
PCNX1-209ENST00000554879 PXYLP1Q8TE99 480 aa16.97■□□□□ 0.31
PCNX1-209ENST00000554879 UCMAQ8WVF2 138 aa16.97■□□□□ 0.31
PCNX1-209ENST00000554879 ZNF670Q9BS34 389 aa16.97■□□□□ 0.31
PCNX1-209ENST00000554879 CATSPERBQ9H7T0 1116 aa16.97■□□□□ 0.31
PCNX1-209ENST00000554879 CRADDP78560 199 aa16.97■□□□□ 0.31
PCNX1-209ENST00000554879 PRSS55Q6UWB4 352 aaPredicted RBP16.97■□□□□ 0.31
PCNX1-209ENST00000554879 STRADAQ7RTN6 431 aa16.97■□□□□ 0.31
PCNX1-209ENST00000554879 FBXO44Q9H4M3 255 aa16.97■□□□□ 0.31
PCNX1-209ENST00000554879 DCTN4Q9UJW0 460 aa16.97■□□□□ 0.31
PCNX1-209ENST00000554879 E2F6O75461 281 aa16.97■□□□□ 0.31
PCNX1-209ENST00000554879 URODP06132 367 aa16.97■□□□□ 0.31
PCNX1-209ENST00000554879 TBX4P57082 545 aa16.97■□□□□ 0.31
PCNX1-209ENST00000554879 CYP1B1Q16678 543 aa16.97■□□□□ 0.31
PCNX1-209ENST00000554879 SIX5Q8N196 739 aa16.97■□□□□ 0.31
PCNX1-209ENST00000554879 ZCCHC9Q8N567 271 aaKnown RBP16.97■□□□□ 0.31
PCNX1-209ENST00000554879 TGS1Q96RS0 853 aaKnown RBP16.97■□□□□ 0.31
PCNX1-209ENST00000554879 ABCC13Q9NSE7 274 aa16.97■□□□□ 0.31
PCNX1-209ENST00000554879 TMEM161AQ9NX61 479 aa16.97■□□□□ 0.31
PCNX1-209ENST00000554879 ARL2BPQ9Y2Y0 163 aa16.97■□□□□ 0.31
PCNX1-209ENST00000554879 ANKRD33BA6NCL7 494 aa16.96■□□□□ 0.31
PCNX1-209ENST00000554879 FOXO6A8MYZ6 492 aa16.96■□□□□ 0.31
PCNX1-209ENST00000554879 ENTPD5O75356 428 aa16.96■□□□□ 0.31
PCNX1-209ENST00000554879 RPL10AP62906 217 aaKnown RBP16.96■□□□□ 0.31
PCNX1-209ENST00000554879 ADAM17P78536 824 aa16.96■□□□□ 0.31
PCNX1-209ENST00000554879 FASTKD3Q14CZ7 662 aaKnown RBP16.96■□□□□ 0.31
PCNX1-209ENST00000554879 FYB2Q5VWT5 728 aa16.96■□□□□ 0.31
PCNX1-209ENST00000554879 TMC7Q7Z402 723 aa16.96■□□□□ 0.31
PCNX1-209ENST00000554879 BBS5Q8N3I7 341 aa16.96■□□□□ 0.31
PCNX1-209ENST00000554879 C12orf50Q8NA57 414 aaPredicted RBP16.96■□□□□ 0.31
PCNX1-209ENST00000554879 CMASQ8NFW8 434 aaPredicted RBP16.96■□□□□ 0.31
PCNX1-209ENST00000554879 CITO14578 2027 aa16.96■□□□□ 0.31
PCNX1-209ENST00000554879 A0A1W2PQH9 124 aa16.96■□□□□ 0.31
PCNX1-209ENST00000554879 MAGEA13PA6NCF6 341 aa16.96■□□□□ 0.31
PCNX1-209ENST00000554879 ARL1P40616 181 aaPredicted RBP16.96■□□□□ 0.31
PCNX1-209ENST00000554879 PTPN9P43378 593 aa16.96■□□□□ 0.31
PCNX1-209ENST00000554879 ADARP55265 1226 aaKnown RBP16.96■□□□□ 0.31
PCNX1-209ENST00000554879 CLIC5Q9NZA1 410 aa16.96■□□□□ 0.31
PCNX1-209ENST00000554879 GYG2O15488 501 aa16.96■□□□□ 0.31
PCNX1-209ENST00000554879 GSTA1P08263 222 aa16.96■□□□□ 0.31
PCNX1-209ENST00000554879 ACRP10323 421 aa16.96■□□□□ 0.31
PCNX1-209ENST00000554879 NOMO1Q15155 1222 aa16.96■□□□□ 0.31
PCNX1-209ENST00000554879 IL31Q6EBC2 164 aa16.96■□□□□ 0.31
PCNX1-209ENST00000554879 CES3Q6UWW8 571 aa16.96■□□□□ 0.31
PCNX1-209ENST00000554879 NUP93Q8N1F7 819 aa16.96■□□□□ 0.31
PCNX1-209ENST00000554879 SLC25A41Q8N5S1 370 aa16.96■□□□□ 0.31
PCNX1-209ENST00000554879 ZNF784Q8NCA9 323 aaPredicted RBP16.96■□□□□ 0.31
PCNX1-209ENST00000554879 ERLEC1Q96DZ1 483 aa16.96■□□□□ 0.31
PCNX1-209ENST00000554879 HHIPL1Q96JK4 782 aa16.96■□□□□ 0.31
PCNX1-209ENST00000554879 FAM129AQ9BZQ8 928 aa16.96■□□□□ 0.31
PCNX1-209ENST00000554879 ROPN1BQ9BZX4 212 aaPredicted RBP16.96■□□□□ 0.31
PCNX1-209ENST00000554879 ROPN1Q9HAT0 212 aaPredicted RBP16.96■□□□□ 0.31
PCNX1-209ENST00000554879 ANLNQ9NQW6 1124 aa16.96■□□□□ 0.31
PCNX1-209ENST00000554879 ATXN2Q99700 1313 aaKnown RBP16.95■□□□□ 0.3
PCNX1-209ENST00000554879 DDHD2O94830 711 aa16.95■□□□□ 0.3
PCNX1-209ENST00000554879 SPATA31D3P0C874 917 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms