RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 CCR1P32246 355 aa18.81■□□□□ 0.6
SHMT2-206ENST00000553529 SOX5P35711 763 aa18.81■□□□□ 0.6
SHMT2-206ENST00000553529 MATKP42679 507 aa18.81■□□□□ 0.6
SHMT2-206ENST00000553529 GABRB2P47870 512 aa18.81■□□□□ 0.6
SHMT2-206ENST00000553529 BYSLQ13895 437 aaKnown RBP18.81■□□□□ 0.6
SHMT2-206ENST00000553529 PLEKHG6Q3KR16 790 aa18.81■□□□□ 0.6
SHMT2-206ENST00000553529 DCAF12L1Q5VU92 463 aa18.81■□□□□ 0.6
SHMT2-206ENST00000553529 SLC23A3Q6PIS1 610 aa18.81■□□□□ 0.6
SHMT2-206ENST00000553529 SLC36A4Q6YBV0 504 aa18.81■□□□□ 0.6
SHMT2-206ENST00000553529 ERICH1Q86X53 443 aa18.81■□□□□ 0.6
SHMT2-206ENST00000553529 ZNF683Q8IZ20 524 aa18.81■□□□□ 0.6
SHMT2-206ENST00000553529 ZCCHC9Q8N567 271 aaKnown RBP18.81■□□□□ 0.6
SHMT2-206ENST00000553529 ATP6V0D2Q8N8Y2 350 aa18.81■□□□□ 0.6
SHMT2-206ENST00000553529 ZNF397Q8NF99 534 aaPredicted RBP18.81■□□□□ 0.6
SHMT2-206ENST00000553529 JOSD2Q8TAC2 188 aa18.81■□□□□ 0.6
SHMT2-206ENST00000553529 NOX5Q96PH1 765 aa18.81■□□□□ 0.6
SHMT2-206ENST00000553529 C11orf70Q9BRQ4 267 aa18.81■□□□□ 0.6
SHMT2-206ENST00000553529 TKTL2Q9H0I9 626 aa18.81■□□□□ 0.6
SHMT2-206ENST00000553529 MIR1-1HGQ9H1L0 117 aa18.81■□□□□ 0.6
SHMT2-206ENST00000553529 CAPN10Q9HC96 672 aa18.81■□□□□ 0.6
SHMT2-206ENST00000553529 TMEM9BQ9NQ34 198 aa18.81■□□□□ 0.6
SHMT2-206ENST00000553529 ANO10Q9NW15 660 aa18.81■□□□□ 0.6
SHMT2-206ENST00000553529 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.81■□□□□ 0.6
SHMT2-206ENST00000553529 LGALS16A8MUM7 142 aa18.8■□□□□ 0.6
SHMT2-206ENST00000553529 MEI4A8MW99 385 aa18.8■□□□□ 0.6
SHMT2-206ENST00000553529 RNF103O00237 685 aa18.8■□□□□ 0.6
SHMT2-206ENST00000553529 ADRB1P08588 477 aa18.8■□□□□ 0.6
SHMT2-206ENST00000553529 ABCB4P21439 1286 aa18.8■□□□□ 0.6
SHMT2-206ENST00000553529 SDHBP21912 280 aa18.8■□□□□ 0.6
SHMT2-206ENST00000553529 NOS2P35228 1153 aa18.8■□□□□ 0.6
SHMT2-206ENST00000553529 FOXK2Q01167 660 aa18.8■□□□□ 0.6
SHMT2-206ENST00000553529 BNC1Q01954 994 aa18.8■□□□□ 0.6
SHMT2-206ENST00000553529 C15orf59Q2T9L4 293 aaPredicted RBP18.8■□□□□ 0.6
SHMT2-206ENST00000553529 CT47A1Q5JQC4 288 aaPredicted RBP18.8■□□□□ 0.6
SHMT2-206ENST00000553529 C9orf64Q5T6V5 341 aa18.8■□□□□ 0.6
SHMT2-206ENST00000553529 CAVIN1Q6NZI2 390 aaKnown RBP18.8■□□□□ 0.6
SHMT2-206ENST00000553529 DEFB124Q8NES8 71 aa18.8■□□□□ 0.6
SHMT2-206ENST00000553529 C18orf8Q96DM3 657 aa18.8■□□□□ 0.6
SHMT2-206ENST00000553529 ALG14Q96F25 216 aa18.8■□□□□ 0.6
SHMT2-206ENST00000553529 PCMTD1Q96MG8 357 aaPredicted RBP18.8■□□□□ 0.6
SHMT2-206ENST00000553529 RPRD1AQ96P16 312 aaPredicted RBP18.8■□□□□ 0.6
SHMT2-206ENST00000553529 DDX50Q9BQ39 737 aaKnown RBP18.8■□□□□ 0.6
SHMT2-206ENST00000553529 MPP6Q9NZW5 540 aa18.8■□□□□ 0.6
SHMT2-206ENST00000553529 EVLQ9UI08 416 aaPredicted RBP18.8■□□□□ 0.6
SHMT2-206ENST00000553529 EIF2B4Q9UI10 523 aaKnown RBP18.8■□□□□ 0.6
SHMT2-206ENST00000553529 TMEM59LQ9UK28 342 aa18.8■□□□□ 0.6
SHMT2-206ENST00000553529 PI4KAP42356 2102 aa18.8■□□□□ 0.6
SHMT2-206ENST00000553529 PLXNA2O75051 1894 aa18.8■□□□□ 0.6
SHMT2-206ENST00000553529 NPC1O15118 1278 aa18.79■□□□□ 0.6
SHMT2-206ENST00000553529 MID1O15344 667 aa18.79■□□□□ 0.6
SHMT2-206ENST00000553529 CYP1A1P04798 512 aaPredicted RBP18.79■□□□□ 0.6
SHMT2-206ENST00000553529 ATP5BP06576 529 aaKnown RBP18.79■□□□□ 0.6
SHMT2-206ENST00000553529 ACADMP11310 421 aa18.79■□□□□ 0.6
SHMT2-206ENST00000553529 ATP11AP98196 1134 aa18.79■□□□□ 0.6
SHMT2-206ENST00000553529 UBXN1Q04323 297 aa18.79■□□□□ 0.6
SHMT2-206ENST00000553529 PTP4A2Q12974 167 aa18.79■□□□□ 0.6
SHMT2-206ENST00000553529 POM121L1PQ3SYA9 428 aa18.79■□□□□ 0.6
SHMT2-206ENST00000553529 METTL3Q86U44 580 aaKnown RBP18.79■□□□□ 0.6
SHMT2-206ENST00000553529 FAM131BQ86XD5 332 aa18.79■□□□□ 0.6
SHMT2-206ENST00000553529 MMAAQ8IVH4 418 aaKnown RBP18.79■□□□□ 0.6
SHMT2-206ENST00000553529 STK40Q8N2I9 435 aa18.79■□□□□ 0.6
SHMT2-206ENST00000553529 SNX19Q92543 992 aa18.79■□□□□ 0.6
SHMT2-206ENST00000553529 CNTNAP3BQ96NU0 1288 aa18.79■□□□□ 0.6
SHMT2-206ENST00000553529 TRIM62Q9BVG3 475 aa18.79■□□□□ 0.6
SHMT2-206ENST00000553529 NUSAP1Q9BXS6 441 aaKnown RBP18.79■□□□□ 0.6
SHMT2-206ENST00000553529 CNTNAP3Q9BZ76 1288 aa18.79■□□□□ 0.6
SHMT2-206ENST00000553529 IL21RQ9HBE5 538 aa18.79■□□□□ 0.6
SHMT2-206ENST00000553529 ARHGEF38Q9NXL2 777 aa18.79■□□□□ 0.6
SHMT2-206ENST00000553529 KIAA1522Q9P206 1035 aaPredicted RBP18.79■□□□□ 0.6
SHMT2-206ENST00000553529 CEP83Q9Y592 693 aa18.79■□□□□ 0.6
SHMT2-206ENST00000553529 ACTL7AQ9Y615 435 aa18.79■□□□□ 0.6
SHMT2-206ENST00000553529 TYW5A2RUC4 315 aaKnown RBP18.78■□□□□ 0.6
SHMT2-206ENST00000553529 SNAP91O60641 907 aa18.78■□□□□ 0.6
SHMT2-206ENST00000553529 IGLV3-19P01714 112 aa18.78■□□□□ 0.6
SHMT2-206ENST00000553529 SPINK2P20155 84 aa18.78■□□□□ 0.6
SHMT2-206ENST00000553529 GLDCP23378 1020 aa18.78■□□□□ 0.6
SHMT2-206ENST00000553529 PSMD8P48556 350 aa18.78■□□□□ 0.6
SHMT2-206ENST00000553529 CXCR3P49682 368 aa18.78■□□□□ 0.6
SHMT2-206ENST00000553529 NOVA1P51513 510 aaKnown RBP18.78■□□□□ 0.6
SHMT2-206ENST00000553529 BPIFB4P59827 614 aa18.78■□□□□ 0.6
SHMT2-206ENST00000553529 FAM193AP78312 1265 aa18.78■□□□□ 0.6
SHMT2-206ENST00000553529 CDR2Q01850 454 aa18.78■□□□□ 0.6
SHMT2-206ENST00000553529 DEUP1Q05D60 604 aa18.78■□□□□ 0.6
SHMT2-206ENST00000553529 CDO1Q16878 200 aa18.78■□□□□ 0.6
SHMT2-206ENST00000553529 DUOXA1Q1HG43 343 aa18.78■□□□□ 0.6
SHMT2-206ENST00000553529 HNRNPA1L2Q32P51 320 aaKnown RBP18.78■□□□□ 0.6
SHMT2-206ENST00000553529 FKBP15Q5T1M5 1219 aa18.78■□□□□ 0.6
SHMT2-206ENST00000553529 TFAP2DQ7Z6R9 452 aa18.78■□□□□ 0.6
SHMT2-206ENST00000553529 MINDY1Q8N5J2 469 aa18.78■□□□□ 0.6
SHMT2-206ENST00000553529 PTPRN2Q92932 1015 aa18.78■□□□□ 0.6
SHMT2-206ENST00000553529 NT5C3BQ969T7 300 aa18.78■□□□□ 0.6
SHMT2-206ENST00000553529 CAMK1GQ96NX5 476 aa18.78■□□□□ 0.6
SHMT2-206ENST00000553529 FAM129BQ96TA1 746 aa18.78■□□□□ 0.6
SHMT2-206ENST00000553529 PSMB7Q99436 277 aa18.78■□□□□ 0.6
SHMT2-206ENST00000553529 A0A1W2PP55 124 aa18.77■□□□□ 0.6
SHMT2-206ENST00000553529 FAM47DPA6NHR8 397 aa18.77■□□□□ 0.6
SHMT2-206ENST00000553529 METTL12A8MUP2 240 aa18.77■□□□□ 0.6
SHMT2-206ENST00000553529 GOLGA6L22H0YM25 854 aa18.77■□□□□ 0.6
SHMT2-206ENST00000553529 K7ERQ8 282 aa18.77■□□□□ 0.6
SHMT2-206ENST00000553529 FOXD2O60548 495 aaPredicted RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms