RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 PIGVQ9NUD9 493 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 ETNK2Q9NVF9 386 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 DNAAF2Q9NVR5 837 aaKnown RBP7.53□□□□□ -1.2
ATXN3-221ENST00000553498 GPATCH2LQ9NWQ4 482 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 ARHGEF38Q9NXL2 777 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 EURLQ9NYK6 297 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 CLIC5Q9NZA1 410 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 IL37Q9NZH6 218 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 IGSF9Q9P2J2 1179 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 PSMC3IPQ9P2W1 217 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-221ENST00000553498 HSFX1Q9UBD0 423 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 SCML2Q9UQR0 700 aa7.53□□□□□ -1.2
ATXN3-221ENST00000553498 EBAG9O00559 213 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 NDUFAB1O14561 156 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 IRAK2O43187 625 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 PSMD3O43242 534 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 NBNO60934 754 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 EFCAB14O75071 495 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 TFE3P19532 575 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-221ENST00000553498 HOXC13P31276 330 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 MAGEA3P43357 314 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 ATP1A2P50993 1020 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 SLC5A3P53794 718 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 RPL10AP62906 217 aaKnown RBP7.52□□□□□ -1.21
ATXN3-221ENST00000553498 GBE1Q04446 702 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 GPR17Q13304 367 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 NAB1Q13506 487 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 LONRF1Q17RB8 773 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 CTXN3Q4LDR2 81 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 RAB6CQ53S08 254 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 NUGGCQ68CJ6 796 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 ITPRIPL1Q6GPH6 555 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 MSANTD2Q6P1R3 559 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 NPNTQ6UXI9 565 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 LRRC31Q6UY01 552 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 C3orf62Q6ZUJ4 267 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 GPRIN1Q7Z2K8 1008 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 LRRTM3Q86VH5 581 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 EXOC3L1Q86VI1 746 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 ZNF280BQ86YH2 543 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 GPR65Q8IYL9 337 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 FBXO36Q8NEA4 188 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 DBF4BQ8NFT6 615 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 EPS8L3Q8TE67 593 aaKnown RBP7.52□□□□□ -1.21
ATXN3-221ENST00000553498 DQX1Q8TE96 717 aaKnown RBP7.52□□□□□ -1.21
ATXN3-221ENST00000553498 ZDHHC1Q8WTX9 485 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 MAML1Q92585 1016 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 FATE1Q969F0 183 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 GTPBP3Q969Y2 492 aaKnown RBP7.52□□□□□ -1.21
ATXN3-221ENST00000553498 HDAC11Q96DB2 347 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 CASD1Q96PB1 797 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 DHRS4Q9BTZ2 278 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 OSBPL7Q9BZF2 842 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 NSRP1Q9H0G5 558 aaKnown RBP7.52□□□□□ -1.21
ATXN3-221ENST00000553498 TKTL2Q9H0I9 626 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 RAB6CQ9H0N0 254 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 CRISPLD1Q9H336 500 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 CATSPERBQ9H7T0 1116 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 VPS37BQ9H9H4 285 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 GPAMQ9HCL2 828 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 INTS9Q9NV88 658 aaKnown RBP7.52□□□□□ -1.21
ATXN3-221ENST00000553498 NKIRAS1Q9NYS0 192 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 ZNF180Q9UJW8 692 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 MAFFQ9ULX9 164 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 TEX264Q9Y6I9 313 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 IKBKGQ9Y6K9 419 aa7.52□□□□□ -1.21
ATXN3-221ENST00000553498 ATXN2Q99700 1313 aaKnown RBP7.52□□□□□ -1.21
ATXN3-221ENST00000553498 ANK1P16157 1881 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 IQANK1A0A1B0GTG1 560 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 MAGEB16A2A368 324 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 WASH4PA8MWX3 477 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 I3L4J1 428 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 PRPF4O43172 522 aaKnown RBP eCLIP7.51□□□□□ -1.21
ATXN3-221ENST00000553498 CREB3O43889 395 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 TBC1D4O60343 1298 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 TMEM63AO94886 807 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 APRTP07741 180 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 ERCC2P18074 760 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 AMPD1P23109 780 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 IGFBP6P24592 240 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-221ENST00000553498 YY1P25490 414 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 CNTFP26441 200 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 GBP2P32456 591 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-221ENST00000553498 MSH2P43246 934 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 ATXN1P54253 815 aaKnown RBP7.51□□□□□ -1.21
ATXN3-221ENST00000553498 CACNA2D1P54289 1103 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 IFI35P80217 286 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-221ENST00000553498 GUCY1A3Q02108 690 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 RING1Q06587 406 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 PPIDQ08752 370 aaKnown RBP7.51□□□□□ -1.21
ATXN3-221ENST00000553498 GALNT2Q10471 571 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 SLC10A2Q12908 348 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-221ENST00000553498 DNAJC3Q13217 504 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 FRG1Q14331 258 aaKnown RBP7.51□□□□□ -1.21
ATXN3-221ENST00000553498 BBS9Q3SYG4 887 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 PAN2Q504Q3 1202 aaKnown RBP7.51□□□□□ -1.21
ATXN3-221ENST00000553498 SLC39A12Q504Y0 691 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 ANKRD20A2Q5SQ80 823 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 FNBP1LQ5T0N5 605 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 ANKRD20A1Q5TYW2 823 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms