RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 TFAP2DQ7Z6R9 452 aa29.59■■■□□ 2.33
BRF1-213ENST00000548421 LZTR1Q8N653 840 aa29.59■■■□□ 2.33
BRF1-213ENST00000548421 NPWQ8N729 165 aa29.59■■■□□ 2.33
BRF1-213ENST00000548421 MAGOHBQ96A72 148 aaKnown RBP29.59■■■□□ 2.33
BRF1-213ENST00000548421 TMA16Q96EY4 203 aaKnown RBP29.59■■■□□ 2.33
BRF1-213ENST00000548421 FAM118BQ9BPY3 351 aa29.59■■■□□ 2.33
BRF1-213ENST00000548421 LRRC19Q9H756 370 aa29.59■■■□□ 2.33
BRF1-213ENST00000548421 DTLQ9NZJ0 730 aa29.59■■■□□ 2.33
BRF1-213ENST00000548421 NUP205Q92621 2012 aa29.58■■■□□ 2.33
BRF1-213ENST00000548421 A0A1B0GVM2 712 aa29.58■■■□□ 2.33
BRF1-213ENST00000548421 TCAF2A6NFQ2 919 aa29.58■■■□□ 2.33
BRF1-213ENST00000548421 HEPACAM2A8MVW5 462 aa29.58■■■□□ 2.33
BRF1-213ENST00000548421 MBTPS2O43462 519 aa29.58■■■□□ 2.33
BRF1-213ENST00000548421 CHST9Q7L1S5 443 aa29.58■■■□□ 2.33
BRF1-213ENST00000548421 ZNF212Q9UDV6 495 aa29.58■■■□□ 2.33
BRF1-213ENST00000548421 RAD54BQ9Y620 910 aa29.58■■■□□ 2.33
BRF1-213ENST00000548421 MCF2LO15068 1137 aa29.57■■■□□ 2.32
BRF1-213ENST00000548421 LIASO43766 372 aa29.57■■■□□ 2.32
BRF1-213ENST00000548421 CLDN11O75508 207 aa29.57■■■□□ 2.32
BRF1-213ENST00000548421 CHRNA3P32297 505 aa29.57■■■□□ 2.32
BRF1-213ENST00000548421 MAPKAPK2P49137 400 aa29.57■■■□□ 2.32
BRF1-213ENST00000548421 SLC10A2Q12908 348 aaPredicted RBP29.57■■■□□ 2.32
BRF1-213ENST00000548421 MPPE1Q53F39 396 aa29.57■■■□□ 2.32
BRF1-213ENST00000548421 TANGO2Q6ICL3 276 aa29.57■■■□□ 2.32
BRF1-213ENST00000548421 OSCP1Q8WVF1 389 aa29.57■■■□□ 2.32
BRF1-213ENST00000548421 KLC2Q9H0B6 622 aa29.57■■■□□ 2.32
BRF1-213ENST00000548421 DDX47Q9H0S4 455 aaKnown RBP29.57■■■□□ 2.32
BRF1-213ENST00000548421 NDFIP2Q9NV92 336 aa29.57■■■□□ 2.32
BRF1-213ENST00000548421 WNT6Q9Y6F9 365 aa29.57■■■□□ 2.32
BRF1-213ENST00000548421 TBL1XO60907 577 aa29.56■■■□□ 2.32
BRF1-213ENST00000548421 DRICH1Q6PGQ1 229 aaPredicted RBP29.56■■■□□ 2.32
BRF1-213ENST00000548421 KLHL7Q8IXQ5 586 aa29.56■■■□□ 2.32
BRF1-213ENST00000548421 LRRN4CLQ8ND94 238 aa29.56■■■□□ 2.32
BRF1-213ENST00000548421 SLC35B2Q8TB61 432 aa29.56■■■□□ 2.32
BRF1-213ENST00000548421 OLFM3Q96PB7 478 aa29.56■■■□□ 2.32
BRF1-213ENST00000548421 EPS15L1Q9UBC2 864 aa29.56■■■□□ 2.32
BRF1-213ENST00000548421 PRUNE2Q8WUY3 3088 aa29.55■■■□□ 2.32
BRF1-213ENST00000548421 MAP3K6O95382 1288 aa29.55■■■□□ 2.32
BRF1-213ENST00000548421 CYBBP04839 570 aa29.55■■■□□ 2.32
BRF1-213ENST00000548421 FNTAP49354 379 aa29.55■■■□□ 2.32
BRF1-213ENST00000548421 EIF3EP60228 445 aaKnown RBP29.55■■■□□ 2.32
BRF1-213ENST00000548421 SNX1Q13596 522 aa29.55■■■□□ 2.32
BRF1-213ENST00000548421 BYSLQ13895 437 aaKnown RBP29.55■■■□□ 2.32
BRF1-213ENST00000548421 MPP7Q5T2T1 576 aa29.55■■■□□ 2.32
BRF1-213ENST00000548421 TPGS1Q6ZTW0 290 aa29.55■■■□□ 2.32
BRF1-213ENST00000548421 UMODL1-AS1Q8N2C9 162 aa29.55■■■□□ 2.32
BRF1-213ENST00000548421 DDI1Q8WTU0 396 aa29.55■■■□□ 2.32
BRF1-213ENST00000548421 ELSPBP1Q96BH3 223 aa29.55■■■□□ 2.32
BRF1-213ENST00000548421 KRT12Q99456 494 aa29.55■■■□□ 2.32
BRF1-213ENST00000548421 LINC00597Q9H2U6 94 aa29.55■■■□□ 2.32
BRF1-213ENST00000548421 THG1LQ9NWX6 298 aaKnown RBP29.55■■■□□ 2.32
BRF1-213ENST00000548421 DUS2Q9NX74 493 aaKnown RBP29.55■■■□□ 2.32
BRF1-213ENST00000548421 DNPEPQ9ULA0 475 aa29.55■■■□□ 2.32
BRF1-213ENST00000548421 OR1E1P30953 314 aa29.55■■■□□ 2.32
BRF1-213ENST00000548421 COILP38432 576 aaPredicted RBP29.55■■■□□ 2.32
BRF1-213ENST00000548421 IFNAR2P48551 515 aa29.55■■■□□ 2.32
BRF1-213ENST00000548421 NDST2P52849 883 aa29.55■■■□□ 2.32
BRF1-213ENST00000548421 CCDC137Q6PK04 289 aaKnown RBP29.55■■■□□ 2.32
BRF1-213ENST00000548421 MTSS1LQ765P7 747 aa29.55■■■□□ 2.32
BRF1-213ENST00000548421 NKD2Q969F2 451 aaPredicted RBP29.55■■■□□ 2.32
BRF1-213ENST00000548421 RUNDC3BQ96NL0 473 aa29.55■■■□□ 2.32
BRF1-213ENST00000548421 CHD5Q8TDI0 1954 aa29.54■■■□□ 2.32
BRF1-213ENST00000548421 MYOFQ9NZM1 2061 aa29.54■■■□□ 2.32
BRF1-213ENST00000548421 NCAM2O15394 837 aa29.54■■■□□ 2.32
BRF1-213ENST00000548421 MX2P20592 715 aa29.54■■■□□ 2.32
BRF1-213ENST00000548421 XRCC4Q13426 336 aa29.54■■■□□ 2.32
BRF1-213ENST00000548421 AFMIDQ63HM1 303 aa29.54■■■□□ 2.32
BRF1-213ENST00000548421 TTC27Q6P3X3 843 aa29.54■■■□□ 2.32
BRF1-213ENST00000548421 VITQ6UXI7 678 aa29.54■■■□□ 2.32
BRF1-213ENST00000548421 ZC3H18Q86VM9 953 aaKnown RBP29.54■■■□□ 2.32
BRF1-213ENST00000548421 MFSD6LQ8IWD5 586 aa29.54■■■□□ 2.32
BRF1-213ENST00000548421 ADGRG2Q8IZP9 1017 aa29.54■■■□□ 2.32
BRF1-213ENST00000548421 MMGT1Q8N4V1 131 aa29.54■■■□□ 2.32
BRF1-213ENST00000548421 NOA1Q8NC60 698 aaKnown RBP29.54■■■□□ 2.32
BRF1-213ENST00000548421 IRF7Q92985 503 aa29.54■■■□□ 2.32
BRF1-213ENST00000548421 CELF6Q96J87 481 aaKnown RBP29.54■■■□□ 2.32
BRF1-213ENST00000548421 SPHK2Q9NRA0 654 aa29.54■■■□□ 2.32
BRF1-213ENST00000548421 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP29.53■■■□□ 2.32
BRF1-213ENST00000548421 RBP3P10745 1247 aa29.53■■■□□ 2.32
BRF1-213ENST00000548421 FCHO2Q0JRZ9 810 aa29.53■■■□□ 2.32
BRF1-213ENST00000548421 ZNF177Q13360 481 aaPredicted RBP29.53■■■□□ 2.32
BRF1-213ENST00000548421 PDK1Q15118 436 aa29.53■■■□□ 2.32
BRF1-213ENST00000548421 OASLQ15646 514 aaKnown RBP29.53■■■□□ 2.32
BRF1-213ENST00000548421 C6orf118Q5T5N4 469 aa29.53■■■□□ 2.32
BRF1-213ENST00000548421 PARM1Q6UWI2 310 aa29.53■■■□□ 2.32
BRF1-213ENST00000548421 ARHGAP12Q8IWW6 846 aa29.53■■■□□ 2.32
BRF1-213ENST00000548421 NETO2Q8NC67 525 aa29.53■■■□□ 2.32
BRF1-213ENST00000548421 ST13P5Q8NFI4 369 aaPredicted RBP29.53■■■□□ 2.32
BRF1-213ENST00000548421 FGF14Q92915 247 aa29.53■■■□□ 2.32
BRF1-213ENST00000548421 NYNRINQ9P2P1 1898 aaKnown RBP29.53■■■□□ 2.32
BRF1-213ENST00000548421 H7C0C1 242 aa29.52■■■□□ 2.32
BRF1-213ENST00000548421 PPP1R12AO14974 1030 aaPredicted RBP29.52■■■□□ 2.32
BRF1-213ENST00000548421 ECI2O75521 394 aa29.52■■■□□ 2.32
BRF1-213ENST00000548421 LUC7L3O95232 432 aaKnown RBP29.52■■■□□ 2.32
BRF1-213ENST00000548421 HOXD9P28356 352 aaPredicted RBP29.52■■■□□ 2.32
BRF1-213ENST00000548421 ATP5OP48047 213 aa29.52■■■□□ 2.32
BRF1-213ENST00000548421 GALNT2Q10471 571 aa29.52■■■□□ 2.32
BRF1-213ENST00000548421 EML3Q32P44 896 aa29.52■■■□□ 2.32
BRF1-213ENST00000548421 FYB2Q5VWT5 728 aa29.52■■■□□ 2.32
BRF1-213ENST00000548421 SETD3Q86TU7 594 aaPredicted RBP29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms