RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 ASPAP45381 313 aa15.02□□□□□ -0.01
HOXC11-202ENST00000546378 CACNB2Q08289 660 aaPredicted RBP15.02□□□□□ -0.01
HOXC11-202ENST00000546378 MSLNQ13421 630 aaPredicted RBP15.02□□□□□ -0.01
HOXC11-202ENST00000546378 CERCAMQ5T4B2 595 aa15.02□□□□□ -0.01
HOXC11-202ENST00000546378 FAM81AQ8TBF8 368 aa15.02□□□□□ -0.01
HOXC11-202ENST00000546378 ATP6V1E2Q96A05 226 aa15.02□□□□□ -0.01
HOXC11-202ENST00000546378 TMEM176AQ96HP8 235 aa15.02□□□□□ -0.01
HOXC11-202ENST00000546378 TLL2Q9Y6L7 1015 aa15.02□□□□□ -0.01
HOXC11-202ENST00000546378 ALDOAP04075 364 aaKnown RBP15.01□□□□□ -0.01
HOXC11-202ENST00000546378 CKMT2P17540 419 aa15.01□□□□□ -0.01
HOXC11-202ENST00000546378 AKAP5P24588 427 aa15.01□□□□□ -0.01
HOXC11-202ENST00000546378 RIOX2Q8IUF8 465 aa15.01□□□□□ -0.01
HOXC11-202ENST00000546378 FOXP3Q9BZS1 431 aa15.01□□□□□ -0.01
HOXC11-202ENST00000546378 CHST12Q9NRB3 414 aa15.01□□□□□ -0.01
HOXC11-202ENST00000546378 HMX2A2RU54 273 aa15.01□□□□□ -0.01
HOXC11-202ENST00000546378 TMX2-CTNND1H3BSU7 103 aa15.01□□□□□ -0.01
HOXC11-202ENST00000546378 OGTO15294 1046 aa15.01□□□□□ -0.01
HOXC11-202ENST00000546378 MED7O43513 233 aa15.01□□□□□ -0.01
HOXC11-202ENST00000546378 STAG3L1P0CL83 205 aa15.01□□□□□ -0.01
HOXC11-202ENST00000546378 COX4I1P13073 169 aa15.01□□□□□ -0.01
HOXC11-202ENST00000546378 ITGAXP20702 1163 aa15.01□□□□□ -0.01
HOXC11-202ENST00000546378 UBA1P22314 1058 aaKnown RBP15.01□□□□□ -0.01
HOXC11-202ENST00000546378 PCSK6P29122 969 aa15.01□□□□□ -0.01
HOXC11-202ENST00000546378 STIP1P31948 543 aaKnown RBP15.01□□□□□ -0.01
HOXC11-202ENST00000546378 PLOD1Q02809 727 aaPredicted RBP15.01□□□□□ -0.01
HOXC11-202ENST00000546378 PCSK7Q16549 785 aa15.01□□□□□ -0.01
HOXC11-202ENST00000546378 PAN2Q504Q3 1202 aaKnown RBP15.01□□□□□ -0.01
HOXC11-202ENST00000546378 MTX3Q5HYI7 312 aa15.01□□□□□ -0.01
HOXC11-202ENST00000546378 LRRC8EQ6NSJ5 796 aa15.01□□□□□ -0.01
HOXC11-202ENST00000546378 NAPRTQ6XQN6 538 aa15.01□□□□□ -0.01
HOXC11-202ENST00000546378 NUP93Q8N1F7 819 aa15.01□□□□□ -0.01
HOXC11-202ENST00000546378 SLC4A11Q8NBS3 891 aa15.01□□□□□ -0.01
HOXC11-202ENST00000546378 SOX17Q9H6I2 414 aaPredicted RBP15.01□□□□□ -0.01
HOXC11-202ENST00000546378 ARHGEF38Q9NXL2 777 aa15.01□□□□□ -0.01
HOXC11-202ENST00000546378 BTBD19C9JJ37 291 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 GPR25O00155 361 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 CLDN5O00501 218 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 BUD23O43709 281 aaKnown RBP15□□□□□ -0.01
HOXC11-202ENST00000546378 UQCRBP14927 111 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 PTPN1P18031 435 aaKnown RBP15□□□□□ -0.01
HOXC11-202ENST00000546378 FUT4P22083 530 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 CES1P23141 567 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 CTBP1Q13363 440 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 C16orf72Q14CZ0 275 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 DGKDQ16760 1214 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 RWDD4Q6NW29 188 aaKnown RBP15□□□□□ -0.01
HOXC11-202ENST00000546378 GK5Q6ZS86 529 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 BRSK2Q8IWQ3 736 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 SPATA33Q96N06 139 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 APBA2Q99767 749 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 PCDH18Q9HCL0 1135 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 PDGFCQ9NRA1 345 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 GIMAP2Q9UG22 337 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 GNEQ9Y223 722 aaKnown RBP15□□□□□ -0.01
HOXC11-202ENST00000546378 ZNFX1Q9P2E3 1918 aaKnown RBP15□□□□□ -0.01
HOXC11-202ENST00000546378 A0A096LPK6 155 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 ZC3H11AO75152 810 aaKnown RBP eCLIP15□□□□□ -0.01
HOXC11-202ENST00000546378 ITGA2BP08514 1039 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 CCNG1P51959 295 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 CHN2P52757 468 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 POU6F1Q14863 301 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 NOMO1Q15155 1222 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 STILQ15468 1287 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 TEDDM1Q5T9Z0 273 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 ABHD15Q6UXT9 468 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 C15orf39Q6ZRI6 1047 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 DPP9Q86TI2 863 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 KHSRPQ92945 711 aaKnown RBP eCLIP15□□□□□ -0.01
HOXC11-202ENST00000546378 GPRASP2Q96D09 838 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 TSNARE1Q96NA8 513 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 TCF7L2Q9NQB0 619 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 EGFL7Q9UHF1 273 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 CPA4Q9UI42 421 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 AP4E1Q9UPM8 1137 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 RNF103O00237 685 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 PIGNO95427 931 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 SERPINA6P08185 405 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 STT3AP46977 705 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 KIZQ2M2Z5 673 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 MAP7D1Q3KQU3 841 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 MAVSQ7Z434 540 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 VCPIP1Q96JH7 1222 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 CCDC106Q9BWC9 280 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 UBAP1Q9NZ09 502 aa15□□□□□ -0.01
HOXC11-202ENST00000546378 NUP205Q92621 2012 aa14.99□□□□□ -0.01
HOXC11-202ENST00000546378 AKAP10O43572 662 aa14.99□□□□□ -0.01
HOXC11-202ENST00000546378 XPOTO43592 962 aaKnown RBP14.99□□□□□ -0.01
HOXC11-202ENST00000546378 ZNF286BP0CG31 522 aa14.99□□□□□ -0.01
HOXC11-202ENST00000546378 NAMPTP43490 491 aa14.99□□□□□ -0.01
HOXC11-202ENST00000546378 YAP1P46937 504 aaKnown RBP14.99□□□□□ -0.01
HOXC11-202ENST00000546378 ZNF157P51786 506 aaPredicted RBP14.99□□□□□ -0.01
HOXC11-202ENST00000546378 USP10Q14694 798 aaKnown RBP14.99□□□□□ -0.01
HOXC11-202ENST00000546378 LDLRAP1Q5SW96 308 aa14.99□□□□□ -0.01
HOXC11-202ENST00000546378 TSHZ1Q6ZSZ6 1077 aa14.99□□□□□ -0.01
HOXC11-202ENST00000546378 ZNF786Q8N393 782 aa14.99□□□□□ -0.01
HOXC11-202ENST00000546378 EDEM1Q92611 657 aa14.99□□□□□ -0.01
HOXC11-202ENST00000546378 EBNA1BP2Q99848 306 aaKnown RBP14.99□□□□□ -0.01
HOXC11-202ENST00000546378 CHRAC1Q9NRG0 131 aa14.99□□□□□ -0.01
HOXC11-202ENST00000546378 MAP3K20Q9NYL2 800 aaKnown RBP14.99□□□□□ -0.01
HOXC11-202ENST00000546378 SFMBT1Q9UHJ3 866 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms