RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 EMCNQ9ULC0 261 aa6.71□□□□□ -1.33
PTPRO-208ENST00000542557 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.71□□□□□ -1.34
PTPRO-208ENST00000542557 YJEFN3A6XGL0 299 aa6.71□□□□□ -1.34
PTPRO-208ENST00000542557 HHLA1C9JL84 531 aa6.71□□□□□ -1.34
PTPRO-208ENST00000542557 M0QZ92 97 aa6.71□□□□□ -1.34
PTPRO-208ENST00000542557 GYG2O15488 501 aa6.71□□□□□ -1.34
PTPRO-208ENST00000542557 USP1O94782 785 aa6.71□□□□□ -1.34
PTPRO-208ENST00000542557 LTFP02788 710 aa6.71□□□□□ -1.34
PTPRO-208ENST00000542557 RPLP2P05387 115 aaKnown RBP6.71□□□□□ -1.34
PTPRO-208ENST00000542557 GRK2P25098 689 aa6.71□□□□□ -1.34
PTPRO-208ENST00000542557 PCSK1P29120 753 aa6.71□□□□□ -1.34
PTPRO-208ENST00000542557 RPL9P32969 192 aaKnown RBP6.71□□□□□ -1.34
PTPRO-208ENST00000542557 SERPINB6P35237 376 aa6.71□□□□□ -1.34
PTPRO-208ENST00000542557 RGS2P41220 211 aa6.71□□□□□ -1.34
PTPRO-208ENST00000542557 BEX3Q00994 111 aa6.71□□□□□ -1.34
PTPRO-208ENST00000542557 ZNF33AQ06730 810 aa6.71□□□□□ -1.34
PTPRO-208ENST00000542557 GALNT2Q10471 571 aa6.71□□□□□ -1.34
PTPRO-208ENST00000542557 PDE1CQ14123 709 aaPredicted RBP6.71□□□□□ -1.34
PTPRO-208ENST00000542557 FASTKD1Q53R41 847 aaKnown RBP6.71□□□□□ -1.34
PTPRO-208ENST00000542557 N4BP2L1Q5TBK1 243 aaPredicted RBP6.71□□□□□ -1.34
PTPRO-208ENST00000542557 KCTD11Q693B1 232 aa6.71□□□□□ -1.34
PTPRO-208ENST00000542557 ITPRIPL1Q6GPH6 555 aa6.71□□□□□ -1.34
PTPRO-208ENST00000542557 BHLHA9Q7RTU4 235 aa6.71□□□□□ -1.34
PTPRO-208ENST00000542557 TTC7BQ86TV6 843 aa6.71□□□□□ -1.34
PTPRO-208ENST00000542557 TMEM135Q86UB9 458 aa6.71□□□□□ -1.34
PTPRO-208ENST00000542557 ALYREFQ86V81 257 aaKnown RBP6.71□□□□□ -1.34
PTPRO-208ENST00000542557 RASSF3Q86WH2 238 aa6.71□□□□□ -1.34
PTPRO-208ENST00000542557 KLHDC8BQ8IXV7 354 aa6.71□□□□□ -1.34
PTPRO-208ENST00000542557 UNC5BQ8IZJ1 945 aa6.71□□□□□ -1.34
PTPRO-208ENST00000542557 SMC1BQ8NDV3 1235 aa6.71□□□□□ -1.34
PTPRO-208ENST00000542557 SOCS4Q8WXH5 440 aa6.71□□□□□ -1.34
PTPRO-208ENST00000542557 N4BP2L2Q92802 583 aaPredicted RBP6.71□□□□□ -1.34
PTPRO-208ENST00000542557 PCED1BQ96HM7 432 aa6.71□□□□□ -1.34
PTPRO-208ENST00000542557 NUDCD1Q96RS6 583 aa6.71□□□□□ -1.34
PTPRO-208ENST00000542557 APBA2Q99767 749 aa6.71□□□□□ -1.34
PTPRO-208ENST00000542557 EPAS1Q99814 870 aa6.71□□□□□ -1.34
PTPRO-208ENST00000542557 GORASP1Q9BQQ3 440 aa6.71□□□□□ -1.34
PTPRO-208ENST00000542557 DCLRE1BQ9H816 532 aa6.71□□□□□ -1.34
PTPRO-208ENST00000542557 TAS2R1Q9NYW7 299 aa6.71□□□□□ -1.34
PTPRO-208ENST00000542557 SEPT10Q9P0V9 454 aa6.71□□□□□ -1.34
PTPRO-208ENST00000542557 ZFATQ9P243 1243 aa6.71□□□□□ -1.34
PTPRO-208ENST00000542557 KLHL8Q9P2G9 620 aaPredicted RBP6.71□□□□□ -1.34
PTPRO-208ENST00000542557 GIT1Q9Y2X7 761 aa6.71□□□□□ -1.34
PTPRO-208ENST00000542557 SCN10AQ9Y5Y9 1956 aa6.71□□□□□ -1.34
PTPRO-208ENST00000542557 PATJQ8NI35 1801 aa6.71□□□□□ -1.34
PTPRO-208ENST00000542557 SYNJ2BP-COX16A0A087WUM0 186 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 CCDC195A0A1B0GUA6 201 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 FAM72CH0Y354 149 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 AP3B1O00203 1094 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 MAGEC1O60732 1142 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 SERPINE1P05121 402 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 THP07101 528 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 SERPINA6P08185 405 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 FGF3P11487 239 aaPredicted RBP6.7□□□□□ -1.34
PTPRO-208ENST00000542557 CYP2B6P20813 491 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 DNAJB2P25686 324 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 MLH1P40692 756 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 CXCR3P49682 368 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 AQP5P55064 265 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 CRADDP78560 199 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 FAM72AQ5TYM5 149 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 FAM72DQ6L9T8 149 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 BEND5Q7L4P6 421 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 GPRIN1Q7Z2K8 1008 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 PID1Q7Z2X4 250 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 FAM72BQ86X60 149 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 NPAS4Q8IUM7 802 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 WDR75Q8IWA0 830 aaKnown RBP6.7□□□□□ -1.34
PTPRO-208ENST00000542557 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.7□□□□□ -1.34
PTPRO-208ENST00000542557 TEX9Q8N6V9 391 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.7□□□□□ -1.34
PTPRO-208ENST00000542557 ZNF570Q96NI8 536 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 TRIM62Q9BVG3 475 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 COLEC11Q9BWP8 271 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 CEP41Q9BYV8 373 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 ANLNQ9NQW6 1124 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 BATF3Q9NR55 127 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.7□□□□□ -1.34
PTPRO-208ENST00000542557 GEMIN8Q9NWZ8 242 aaKnown RBP6.7□□□□□ -1.34
PTPRO-208ENST00000542557 BFARQ9NZS9 450 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 COX16Q9P0S2 106 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 TXNDC16Q9P2K2 825 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 NKX1-2Q9UD57 310 aaPredicted RBP6.7□□□□□ -1.34
PTPRO-208ENST00000542557 VANGL2Q9ULK5 521 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 CDY2AQ9Y6F7 541 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 MAGEB16A2A368 324 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 MYBPHLA2RUH7 354 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 C2orf71A6NGG8 1288 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 I6L893 689 aaPredicted RBP6.7□□□□□ -1.34
PTPRO-208ENST00000542557 PROCP04070 461 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 AKR1A1P14550 325 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 ALOX15P16050 662 aaPredicted RBP6.7□□□□□ -1.34
PTPRO-208ENST00000542557 CYP2C18P33260 490 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 GCKP35557 465 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 SERPINB8P50452 374 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 CDK7P50613 346 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 RAP1GDS1P52306 607 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 LIMK2P53671 638 aa6.7□□□□□ -1.34
PTPRO-208ENST00000542557 CSE1LP55060 971 aaKnown RBP6.7□□□□□ -1.34
PTPRO-208ENST00000542557 PDAP1Q13442 181 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms