RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 KCTD16Q68DU8 428 aa11.32□□□□□ -0.6
SCG3-202ENST00000542355 ARHGEF18Q6ZSZ5 1173 aa11.32□□□□□ -0.6
SCG3-202ENST00000542355 CEP128Q6ZU80 1094 aa11.32□□□□□ -0.6
SCG3-202ENST00000542355 TADA2BQ86TJ2 420 aa11.32□□□□□ -0.6
SCG3-202ENST00000542355 RELL1Q8IUW5 271 aa11.32□□□□□ -0.6
SCG3-202ENST00000542355 ZBED8Q8IZ13 594 aa11.32□□□□□ -0.6
SCG3-202ENST00000542355 SP7Q8TDD2 431 aaPredicted RBP11.32□□□□□ -0.6
SCG3-202ENST00000542355 DPF3Q92784 378 aa11.32□□□□□ -0.6
SCG3-202ENST00000542355 SGSM3Q96HU1 749 aa11.32□□□□□ -0.6
SCG3-202ENST00000542355 LRRC4CQ9HCJ2 640 aa11.32□□□□□ -0.6
SCG3-202ENST00000542355 NDFIP2Q9NV92 336 aa11.32□□□□□ -0.6
SCG3-202ENST00000542355 NINJ2Q9NZG7 142 aa11.32□□□□□ -0.6
SCG3-202ENST00000542355 A0A0A0MRY4 1105 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 GOLGA8KD6RF30 607 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 F5H423 210 aaPredicted RBP11.31□□□□□ -0.6
SCG3-202ENST00000542355 SMAPO00193 183 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 RNF103O00237 685 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 DFFAO00273 331 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 BANF1O75531 89 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 STK10O94804 968 aaKnown RBP11.31□□□□□ -0.6
SCG3-202ENST00000542355 GARSP41250 739 aaKnown RBP11.31□□□□□ -0.6
SCG3-202ENST00000542355 KPNA1P52294 538 aaPredicted RBP11.31□□□□□ -0.6
SCG3-202ENST00000542355 ARL4CP56559 192 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 NRG1Q02297 640 aaPredicted RBP11.31□□□□□ -0.6
SCG3-202ENST00000542355 PPIDQ08752 370 aaKnown RBP11.31□□□□□ -0.6
SCG3-202ENST00000542355 WASHC5Q12768 1159 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 KCNJ11Q14654 390 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 FASTKD3Q14CZ7 662 aaKnown RBP11.31□□□□□ -0.6
SCG3-202ENST00000542355 SKIDA1Q1XH10 827 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 MSS51Q4VC12 460 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 TTMPQ5BVD1 217 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 RAP1GAP2Q684P5 730 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 LRRC31Q6UY01 552 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 C4orf22Q6V702 233 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 PID1Q7Z2X4 250 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 PSMG2Q969U7 264 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 HDAC11Q96DB2 347 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 TRMT2BQ96GJ1 504 aaKnown RBP11.31□□□□□ -0.6
SCG3-202ENST00000542355 SPATA13Q96N96 652 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 KLHL5Q96PQ7 755 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 HTATIP2Q9BUP3 242 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 RNF38Q9H0F5 515 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 MTIF3Q9H2K0 278 aaKnown RBP11.31□□□□□ -0.6
SCG3-202ENST00000542355 ENTPD7Q9NQZ7 604 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 GOLGA6L7A0A1B0GV03 622 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 C2orf78A6NCI8 922 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 ALOX15BO15296 676 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 MYOGP15173 224 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 RING1Q06587 406 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 KRT71Q3SY84 523 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 PLPP4Q5VZY2 271 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 NUGGCQ68CJ6 796 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 SDE2Q6IQ49 451 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 FBXL22Q6P050 247 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 SPRED2Q7Z698 418 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 ANKMY2Q8IV38 441 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 CCDC13Q8IYE1 715 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 PDIK1LQ8N165 341 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 ZNF567Q8N184 647 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 ZNF276Q8N554 614 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 LZTR1Q8N653 840 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 PRR7Q8TB68 274 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 POF1BQ8WVV4 589 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 C17orf80Q9BSJ5 609 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 SLC39A8Q9C0K1 460 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 BRD8Q9H0E9 1235 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 TMBIM4Q9HC24 238 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 GKN1Q9NS71 199 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 MAFFQ9ULX9 164 aa11.31□□□□□ -0.6
SCG3-202ENST00000542355 HBS1LQ9Y450 684 aaKnown RBP11.31□□□□□ -0.6
SCG3-202ENST00000542355 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.31□□□□□ -0.6
SCG3-202ENST00000542355 GOLGA6CA6NDK9 693 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 SMIM23A6NLE4 172 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 HIDE1A8MVS5 230 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 E7EVH7 732 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 AVILO75366 819 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 ADH1AP07327 375 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 GOLGA6DP0CG33 693 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 DNAJB1P25685 340 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 PTPN3P26045 913 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 IRAK1P51617 712 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 BBS9Q3SYG4 887 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 LILRA6Q6PI73 481 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 KLHDC10Q6PID8 442 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 ARHGAP36Q6ZRI8 547 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 TFAP2DQ7Z6R9 452 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 ITIH5Q86UX2 942 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 ARHGAP12Q8IWW6 846 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 ZNF683Q8IZ20 524 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 RTL3Q8N8U3 475 aaKnown RBP11.3□□□□□ -0.6
SCG3-202ENST00000542355 IGSF8Q969P0 613 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 EMILIN2Q9BXX0 1053 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 ZYG11BQ9C0D3 744 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 CUEDC1Q9NWM3 386 aaPredicted RBP11.3□□□□□ -0.6
SCG3-202ENST00000542355 GOLGA6AQ9NYA3 693 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 KLHL8Q9P2G9 620 aaPredicted RBP11.3□□□□□ -0.6
SCG3-202ENST00000542355 UXTQ9UBK9 157 aaPredicted RBP11.3□□□□□ -0.6
SCG3-202ENST00000542355 PLXNA3P51805 1871 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 LINC01553A4QN01 128 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 GRXCR1A8MXD5 290 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms