RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 TSPYL1Q9H0U9 437 aa25.21■■□□□ 1.63
TTC3-225ENST00000540756 CATSPERBQ9H7T0 1116 aa25.21■■□□□ 1.63
TTC3-225ENST00000540756 SLC12A6Q9UHW9 1150 aa25.21■■□□□ 1.63
TTC3-225ENST00000540756 FGF10O15520 208 aaPredicted RBP25.2■■□□□ 1.63
TTC3-225ENST00000540756 OAS1P00973 400 aaKnown RBP25.2■■□□□ 1.63
TTC3-225ENST00000540756 F11P03951 625 aa25.2■■□□□ 1.63
TTC3-225ENST00000540756 NUDT17P0C025 328 aa25.2■■□□□ 1.63
TTC3-225ENST00000540756 KCTD16Q68DU8 428 aa25.2■■□□□ 1.63
TTC3-225ENST00000540756 ANKMY2Q8IV38 441 aa25.2■■□□□ 1.63
TTC3-225ENST00000540756 ZBED8Q8IZ13 594 aa25.2■■□□□ 1.63
TTC3-225ENST00000540756 ZNF276Q8N554 614 aa25.2■■□□□ 1.63
TTC3-225ENST00000540756 HDAC11Q96DB2 347 aa25.2■■□□□ 1.63
TTC3-225ENST00000540756 GRM6O15303 877 aa25.2■■□□□ 1.62
TTC3-225ENST00000540756 KLKB1P03952 638 aa25.2■■□□□ 1.62
TTC3-225ENST00000540756 ADH1AP07327 375 aa25.2■■□□□ 1.62
TTC3-225ENST00000540756 PTPN3P26045 913 aa25.2■■□□□ 1.62
TTC3-225ENST00000540756 ZBTB17Q13105 803 aa25.2■■□□□ 1.62
TTC3-225ENST00000540756 RFWD3Q6PCD5 774 aa25.2■■□□□ 1.62
TTC3-225ENST00000540756 RTL3Q8N8U3 475 aaKnown RBP25.2■■□□□ 1.62
TTC3-225ENST00000540756 KREMEN2Q8NCW0 462 aa25.2■■□□□ 1.62
TTC3-225ENST00000540756 SLC22A17Q8WUG5 538 aa25.2■■□□□ 1.62
TTC3-225ENST00000540756 NOL6Q9H6R4 1146 aaKnown RBP25.2■■□□□ 1.62
TTC3-225ENST00000540756 HBS1LQ9Y450 684 aaKnown RBP25.2■■□□□ 1.62
TTC3-225ENST00000540756 RAD54BQ9Y620 910 aa25.2■■□□□ 1.62
TTC3-225ENST00000540756 DYNC1LI1Q9Y6G9 523 aaKnown RBP25.2■■□□□ 1.62
TTC3-225ENST00000540756 CHADO15335 359 aa25.19■■□□□ 1.62
TTC3-225ENST00000540756 OPA1O60313 960 aa25.19■■□□□ 1.62
TTC3-225ENST00000540756 C8AP07357 584 aa25.19■■□□□ 1.62
TTC3-225ENST00000540756 SLC6A4P31645 630 aa25.19■■□□□ 1.62
TTC3-225ENST00000540756 SHHQ15465 462 aa25.19■■□□□ 1.62
TTC3-225ENST00000540756 TXNDC8Q6A555 127 aa25.19■■□□□ 1.62
TTC3-225ENST00000540756 CAPN12Q6ZSI9 719 aa25.19■■□□□ 1.62
TTC3-225ENST00000540756 RELL1Q8IUW5 271 aa25.19■■□□□ 1.62
TTC3-225ENST00000540756 AGGF1Q8N302 714 aaeCLIP25.19■■□□□ 1.622e-7■■□□□ 11.9
TTC3-225ENST00000540756 MICAL1Q8TDZ2 1067 aa25.19■■□□□ 1.62
TTC3-225ENST00000540756 CDK5RAP1Q96SZ6 601 aaKnown RBP25.19■■□□□ 1.62
TTC3-225ENST00000540756 FOXP3Q9BZS1 431 aa25.19■■□□□ 1.62
TTC3-225ENST00000540756 CENPHQ9H3R5 247 aa25.19■■□□□ 1.62
TTC3-225ENST00000540756 TRPC7Q9HCX4 862 aa25.19■■□□□ 1.62
TTC3-225ENST00000540756 TLR9Q9NR96 1032 aa25.19■■□□□ 1.62
TTC3-225ENST00000540756 SMPD4Q9NXE4 827 aa25.19■■□□□ 1.62
TTC3-225ENST00000540756 VPS18Q9P253 973 aa25.19■■□□□ 1.62
TTC3-225ENST00000540756 IRAK3Q9Y616 596 aa25.19■■□□□ 1.62
TTC3-225ENST00000540756 SCAMP3O14828 347 aaKnown RBP25.19■■□□□ 1.62
TTC3-225ENST00000540756 NCAM2O15394 837 aa25.19■■□□□ 1.62
TTC3-225ENST00000540756 CA3P07451 260 aa25.19■■□□□ 1.62
TTC3-225ENST00000540756 IRF1P10914 325 aa25.19■■□□□ 1.62
TTC3-225ENST00000540756 HTR7P34969 479 aa25.19■■□□□ 1.62
TTC3-225ENST00000540756 GRIA1P42261 906 aa25.19■■□□□ 1.62
TTC3-225ENST00000540756 NUMBP49757 651 aa25.19■■□□□ 1.62
TTC3-225ENST00000540756 IFFO1Q0D2I5 559 aa25.19■■□□□ 1.62
TTC3-225ENST00000540756 KLHDC10Q6PID8 442 aa25.19■■□□□ 1.62
TTC3-225ENST00000540756 GAREM2Q75VX8 874 aa25.19■■□□□ 1.62
TTC3-225ENST00000540756 DENND1CQ8IV53 801 aa25.19■■□□□ 1.62
TTC3-225ENST00000540756 SH2D3CQ8N5H7 860 aa25.19■■□□□ 1.62
TTC3-225ENST00000540756 ZSCAN18Q8TBC5 510 aaPredicted RBP25.19■■□□□ 1.62
TTC3-225ENST00000540756 MTIF3Q9H2K0 278 aaKnown RBP25.19■■□□□ 1.62
TTC3-225ENST00000540756 LZTS1Q9Y250 596 aa25.19■■□□□ 1.62
TTC3-225ENST00000540756 REV3LO60673 3130 aa25.18■■□□□ 1.62
TTC3-225ENST00000540756 IGLV3-10A0A075B6K4 115 aa25.18■■□□□ 1.62
TTC3-225ENST00000540756 STC2O76061 302 aa25.18■■□□□ 1.62
TTC3-225ENST00000540756 MX2P20592 715 aa25.18■■□□□ 1.62
TTC3-225ENST00000540756 NUGGCQ68CJ6 796 aa25.18■■□□□ 1.62
TTC3-225ENST00000540756 CENPUQ71F23 418 aa25.18■■□□□ 1.62
TTC3-225ENST00000540756 TADA2BQ86TJ2 420 aa25.18■■□□□ 1.62
TTC3-225ENST00000540756 CHSY1Q86X52 802 aa25.18■■□□□ 1.62
TTC3-225ENST00000540756 CFAP52Q8N1V2 620 aa25.18■■□□□ 1.62
TTC3-225ENST00000540756 GOLGA6L1Q8N7Z2 621 aa25.18■■□□□ 1.62
TTC3-225ENST00000540756 ZNF419Q96HQ0 510 aaPredicted RBP25.18■■□□□ 1.62
TTC3-225ENST00000540756 ZYG11BQ9C0D3 744 aa25.18■■□□□ 1.62
TTC3-225ENST00000540756 MAFFQ9ULX9 164 aa25.18■■□□□ 1.62
TTC3-225ENST00000540756 MTCL1Q9Y4B5 1905 aaKnown RBP25.18■■□□□ 1.62
TTC3-225ENST00000540756 SMIM23A6NLE4 172 aa25.17■■□□□ 1.62
TTC3-225ENST00000540756 TRDMT1O14717 391 aaKnown RBP25.17■■□□□ 1.62
TTC3-225ENST00000540756 ALOX15BO15296 676 aa25.17■■□□□ 1.62
TTC3-225ENST00000540756 PSMB4P28070 264 aa25.17■■□□□ 1.62
TTC3-225ENST00000540756 KPNA1P52294 538 aaPredicted RBP25.17■■□□□ 1.62
TTC3-225ENST00000540756 ARL4CP56559 192 aa25.17■■□□□ 1.62
TTC3-225ENST00000540756 ZXDBP98169 803 aa25.17■■□□□ 1.62
TTC3-225ENST00000540756 CYP4F8P98187 520 aa25.17■■□□□ 1.62
TTC3-225ENST00000540756 FAM133BQ5BKY9 247 aaKnown RBP25.17■■□□□ 1.62
TTC3-225ENST00000540756 LRRC31Q6UY01 552 aa25.17■■□□□ 1.62
TTC3-225ENST00000540756 PID1Q7Z2X4 250 aa25.17■■□□□ 1.62
TTC3-225ENST00000540756 IGDCC3Q8IVU1 814 aa25.17■■□□□ 1.62
TTC3-225ENST00000540756 EPS8L3Q8TE67 593 aaKnown RBP25.17■■□□□ 1.62
TTC3-225ENST00000540756 RPRD1AQ96P16 312 aaPredicted RBP25.17■■□□□ 1.62
TTC3-225ENST00000540756 AGAP3Q96P47 875 aa25.17■■□□□ 1.62
TTC3-225ENST00000540756 EMILIN2Q9BXX0 1053 aa25.17■■□□□ 1.62
TTC3-225ENST00000540756 TMBIM4Q9HC24 238 aa25.17■■□□□ 1.62
TTC3-225ENST00000540756 DENND4CQ5VZ89 1909 aa25.17■■□□□ 1.62
TTC3-225ENST00000540756 GJA1P17302 382 aa25.17■■□□□ 1.62
TTC3-225ENST00000540756 TACR2P21452 398 aa25.17■■□□□ 1.62
TTC3-225ENST00000540756 SKIDA1Q1XH10 827 aa25.17■■□□□ 1.62
TTC3-225ENST00000540756 BBS9Q3SYG4 887 aa25.17■■□□□ 1.62
TTC3-225ENST00000540756 AFMIDQ63HM1 303 aa25.17■■□□□ 1.62
TTC3-225ENST00000540756 ARL14EPQ8N8R7 260 aaPredicted RBP25.17■■□□□ 1.62
TTC3-225ENST00000540756 USP33Q8TEY7 942 aa25.17■■□□□ 1.62
TTC3-225ENST00000540756 SERPINB12Q96P63 405 aa25.17■■□□□ 1.62
TTC3-225ENST00000540756 KLF16Q9BXK1 252 aaPredicted RBP25.17■■□□□ 1.62
TTC3-225ENST00000540756 LRRC3Q9BY71 257 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms