RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 SPATA13Q96N96 652 aa17.35■□□□□ 0.37
COPS3-212ENST00000539941 TTC25Q96NG3 672 aa17.35■□□□□ 0.37
COPS3-212ENST00000539941 LGMNQ99538 433 aa17.35■□□□□ 0.37
COPS3-212ENST00000539941 PPARGC1AQ9UBK2 798 aaKnown RBP17.35■□□□□ 0.37
COPS3-212ENST00000539941 CLUHO75153 1309 aa17.34■□□□□ 0.37
COPS3-212ENST00000539941 GOLGA6L10A6NI86 522 aa17.34■□□□□ 0.37
COPS3-212ENST00000539941 CXCL14O95715 111 aa17.34■□□□□ 0.37
COPS3-212ENST00000539941 TTC4O95801 387 aa17.34■□□□□ 0.37
COPS3-212ENST00000539941 ARL4CP56559 192 aa17.34■□□□□ 0.37
COPS3-212ENST00000539941 UBE3AQ05086 875 aa17.34■□□□□ 0.37
COPS3-212ENST00000539941 AP1B1Q10567 949 aa17.34■□□□□ 0.37
COPS3-212ENST00000539941 HIF1AQ16665 826 aa17.34■□□□□ 0.37
COPS3-212ENST00000539941 CEP85LQ5SZL2 805 aa17.34■□□□□ 0.37
COPS3-212ENST00000539941 ARTNQ5T4W7 220 aa17.34■□□□□ 0.37
COPS3-212ENST00000539941 ARHGEF18Q6ZSZ5 1173 aa17.34■□□□□ 0.37
COPS3-212ENST00000539941 MIB1Q86YT6 1006 aa17.34■□□□□ 0.37
COPS3-212ENST00000539941 CCNYQ8ND76 341 aa17.34■□□□□ 0.37
COPS3-212ENST00000539941 CCDC110Q8TBZ0 833 aa17.34■□□□□ 0.37
COPS3-212ENST00000539941 P2RY11Q96G91 374 aa17.34■□□□□ 0.37
COPS3-212ENST00000539941 EMILIN2Q9BXX0 1053 aa17.34■□□□□ 0.37
COPS3-212ENST00000539941 PLXNA4Q9HCM2 1894 aa17.34■□□□□ 0.37
COPS3-212ENST00000539941 RAB6BQ9NRW1 208 aa17.34■□□□□ 0.37
COPS3-212ENST00000539941 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.33■□□□□ 0.37
COPS3-212ENST00000539941 CTNNB1P35222 781 aa17.33■□□□□ 0.37
COPS3-212ENST00000539941 FDFT1P37268 417 aa17.33■□□□□ 0.37
COPS3-212ENST00000539941 GARSP41250 739 aaKnown RBP17.33■□□□□ 0.37
COPS3-212ENST00000539941 MAGEA4P43358 317 aa17.33■□□□□ 0.37
COPS3-212ENST00000539941 NRLP54845 237 aa17.33■□□□□ 0.37
COPS3-212ENST00000539941 ZNF844Q08AG5 666 aa17.33■□□□□ 0.37
COPS3-212ENST00000539941 IFFO1Q0D2I5 559 aa17.33■□□□□ 0.37
COPS3-212ENST00000539941 SLC29A2Q14542 456 aa17.33■□□□□ 0.37
COPS3-212ENST00000539941 MS4A13Q5J8X5 152 aa17.33■□□□□ 0.37
COPS3-212ENST00000539941 ANKRD22Q5VYY1 191 aa17.33■□□□□ 0.37
COPS3-212ENST00000539941 CCDC149Q6ZUS6 474 aa17.33■□□□□ 0.37
COPS3-212ENST00000539941 TMC7Q7Z402 723 aa17.33■□□□□ 0.37
COPS3-212ENST00000539941 DNAJB7Q7Z6W7 309 aaPredicted RBP17.33■□□□□ 0.37
COPS3-212ENST00000539941 LRRC49Q8IUZ0 686 aa17.33■□□□□ 0.37
COPS3-212ENST00000539941 ZNF683Q8IZ20 524 aa17.33■□□□□ 0.37
COPS3-212ENST00000539941 RTL3Q8N8U3 475 aaKnown RBP17.33■□□□□ 0.37
COPS3-212ENST00000539941 PLD4Q96BZ4 506 aa17.33■□□□□ 0.37
COPS3-212ENST00000539941 TMEM109Q9BVC6 243 aa17.33■□□□□ 0.37
COPS3-212ENST00000539941 XPO7Q9UIA9 1087 aaKnown RBP17.33■□□□□ 0.37
COPS3-212ENST00000539941 IGLV3-10A0A075B6K4 115 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 LCHNA4D1U4 455 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 E7ESA3 106 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 RNF103O00237 685 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 ALOX15BO15296 676 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 TGM5O43548 720 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 KIAA0754O94854 1291 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 FSBPO95073 299 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 MYZAPP0CAP1 466 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 TPSB2P20231 275 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 IRX1P78414 480 aaPredicted RBP17.32■□□□□ 0.36
COPS3-212ENST00000539941 AUHQ13825 339 aaKnown RBP17.32■□□□□ 0.36
COPS3-212ENST00000539941 TPSAB1Q15661 275 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 ANKRD20A2Q5SQ80 823 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 ANKRD20A1Q5TYW2 823 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 ANKRD20A3Q5VUR7 823 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 LILRA6Q6PI73 481 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 PDIK1LQ8N165 341 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 MCUQ8NE86 351 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 TSGA13Q96PP4 275 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 KLHL5Q96PQ7 755 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 VAT1Q99536 393 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 NACA2Q9H009 215 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 RETREG1Q9H6L5 497 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 SAYSD1Q9NPB0 183 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 NINJ2Q9NZG7 142 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 CCDC189A1A4V9 331 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 C5orf67F2Z3F1 127 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 TMEM63AO94886 807 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 C1RP00736 705 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 ABHD2P08910 425 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 RHOQP17081 205 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 CA8P35219 290 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 CDK16Q00536 496 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 SEMA5AQ13591 1074 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 PABPC1LQ4VXU2 614 aaKnown RBP17.32■□□□□ 0.36
COPS3-212ENST00000539941 RTL10Q7L3V2 364 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 YTHDF3Q7Z739 585 aaKnown RBP17.32■□□□□ 0.36
COPS3-212ENST00000539941 C14orf80Q86SX3 495 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 CCDC33Q8N5R6 958 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 AZIN2Q96A70 460 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 PWWP2AQ96N64 755 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 TCF25Q9BQ70 676 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 ZYG11BQ9C0D3 744 aa17.32■□□□□ 0.36
COPS3-212ENST00000539941 LINC01553A4QN01 128 aa17.31■□□□□ 0.36
COPS3-212ENST00000539941 COCHO43405 550 aa17.31■□□□□ 0.36
COPS3-212ENST00000539941 OAS1P00973 400 aaKnown RBP17.31■□□□□ 0.36
COPS3-212ENST00000539941 RB1P06400 928 aa17.31■□□□□ 0.36
COPS3-212ENST00000539941 LIG3P49916 1009 aa17.31■□□□□ 0.36
COPS3-212ENST00000539941 WASHC5Q12768 1159 aa17.31■□□□□ 0.36
COPS3-212ENST00000539941 AFMIDQ63HM1 303 aa17.31■□□□□ 0.36
COPS3-212ENST00000539941 Q7L0L9 218 aa17.31■□□□□ 0.36
COPS3-212ENST00000539941 NLRP14Q86W24 1093 aa17.31■□□□□ 0.36
COPS3-212ENST00000539941 EGFL6Q8IUX8 553 aa17.31■□□□□ 0.36
COPS3-212ENST00000539941 CCDC13Q8IYE1 715 aa17.31■□□□□ 0.36
COPS3-212ENST00000539941 LRRN4Q8WUT4 740 aa17.31■□□□□ 0.36
COPS3-212ENST00000539941 PRMT1Q99873 361 aaKnown RBP17.31■□□□□ 0.36
COPS3-212ENST00000539941 ROPN1BQ9BZX4 212 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms