RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	CNOT1	A5YKK6	2376 aa	Known RBP	12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	TCRBV5S1A1T	A0A578	114 aa		12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	C2CD4B	A6NLJ0	364 aa		12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	GOLGA6L19	H0YKK7	550 aa		12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	EPHX1	P07099	455 aa		12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	KRT3	P12035	628 aa		12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	PRKCH	P24723	683 aa		12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	SDC4	P31431	198 aa		12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	NNMT	P40261	264 aa		12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	PBX1	P40424	430 aa		12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	CSK	P41240	450 aa		12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	WAS	P42768	502 aa		12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	ID4	P47928	161 aa		12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	COPA	P53621	1224 aa		12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	AIF1	P55008	147 aa		12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	RNASE9	P60153	205 aa	Known RBP	12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	ECT2L	Q008S8	904 aa		12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	HNRNPA1L2	Q32P51	320 aa	Known RBP	12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	ZSCAN23	Q3MJ62	389 aa		12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	ARL13B	Q3SXY8	428 aa		12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	FNDC3B	Q53EP0	1204 aa	Known RBP	12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	PITRM1	Q5JRX3	1037 aa		12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	CXorf57	Q6NSI4	855 aa	Known RBP	12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	LRRC31	Q6UY01	552 aa		12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	ZNF783	Q6ZMS7	281 aa		12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	SETD3	Q86TU7	594 aa	Predicted RBP	12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	TMPRSS6	Q8IU80	811 aa		12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	CARNMT1	Q8N4J0	409 aa		12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	CEP76	Q8TAP6	659 aa		12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	PRCC	Q92733	491 aa	Predicted RBP	12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	FOXJ1	Q92949	421 aa		12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	NTAN1	Q96AB6	310 aa		12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	MYEOV	Q96EZ4	313 aa		12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	SIPA1	Q96FS4	1042 aa		12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	MYO19	Q96H55	970 aa		12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	ZNF419	Q96HQ0	510 aa	Predicted RBP	12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	NAP1L5	Q96NT1	182 aa	Predicted RBP	12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	RPRD1A	Q96P16	312 aa	Predicted RBP	12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	TBCB	Q99426	244 aa		12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	RTKN	Q9BST9	563 aa		12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	MKRN2	Q9H000	416 aa	Known RBP	12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	TKTL2	Q9H0I9	626 aa		12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	OSBPL2	Q9H1P3	480 aa		12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	ARRDC1-AS1	Q9H2J1	176 aa		12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	STIM2	Q9P246	746 aa		12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	PPARGC1A	Q9UBK2	798 aa	Known RBP	12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	MBD1	Q9UIS9	605 aa	Predicted RBP	12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	USP18	Q9UMW8	372 aa		12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	TNRC6B	Q9UPQ9	1833 aa	Known RBP	12.69	□□□□□ -0.38
CLTCL1-205	ENST00000538828	CEP192	Q8TEP8	1941 aa		12.68	□□□□□ -0.38
CLTCL1-205	ENST00000538828	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	12.68	□□□□□ -0.38
CLTCL1-205	ENST00000538828	DCLK1	O15075	740 aa		12.68	□□□□□ -0.38
CLTCL1-205	ENST00000538828	MAP3K13	O43283	966 aa		12.68	□□□□□ -0.38
CLTCL1-205	ENST00000538828	ADCY5	O95622	1261 aa		12.68	□□□□□ -0.38
CLTCL1-205	ENST00000538828	PDGFRA	P16234	1089 aa		12.68	□□□□□ -0.38
CLTCL1-205	ENST00000538828	DES	P17661	470 aa		12.68	□□□□□ -0.38
CLTCL1-205	ENST00000538828	BCKDHB	P21953	392 aa		12.68	□□□□□ -0.38
CLTCL1-205	ENST00000538828	CD6	P30203	668 aa		12.68	□□□□□ -0.38
CLTCL1-205	ENST00000538828	UBASH3A	P57075	661 aa		12.68	□□□□□ -0.38
CLTCL1-205	ENST00000538828	FANCC	Q00597	558 aa		12.68	□□□□□ -0.38
CLTCL1-205	ENST00000538828	ZNF177	Q13360	481 aa	Predicted RBP	12.68	□□□□□ -0.38
CLTCL1-205	ENST00000538828	FSCB	Q5H9T9	825 aa		12.68	□□□□□ -0.38
CLTCL1-205	ENST00000538828	ACAD10	Q6JQN1	1059 aa		12.68	□□□□□ -0.38
CLTCL1-205	ENST00000538828	TRNP1	Q6NT89	227 aa		12.68	□□□□□ -0.38
CLTCL1-205	ENST00000538828	USP30	Q70CQ3	517 aa		12.68	□□□□□ -0.38
CLTCL1-205	ENST00000538828	CYP2U1	Q7Z449	544 aa		12.68	□□□□□ -0.38
CLTCL1-205	ENST00000538828	SYT12	Q8IV01	421 aa		12.68	□□□□□ -0.38
CLTCL1-205	ENST00000538828	MCOLN2	Q8IZK6	566 aa		12.68	□□□□□ -0.38
CLTCL1-205	ENST00000538828	CFAP52	Q8N1V2	620 aa		12.68	□□□□□ -0.38
CLTCL1-205	ENST00000538828	SLC30A5	Q8TAD4	765 aa		12.68	□□□□□ -0.38
CLTCL1-205	ENST00000538828	ALG14	Q96F25	216 aa		12.68	□□□□□ -0.38
CLTCL1-205	ENST00000538828	MRGPRX3	Q96LB0	322 aa		12.68	□□□□□ -0.38
CLTCL1-205	ENST00000538828	C11orf70	Q9BRQ4	267 aa		12.68	□□□□□ -0.38
CLTCL1-205	ENST00000538828	SELENOO	Q9BVL4	669 aa		12.68	□□□□□ -0.38
CLTCL1-205	ENST00000538828	ADAM33	Q9BZ11	813 aa		12.68	□□□□□ -0.38
CLTCL1-205	ENST00000538828	PRSS16	Q9NQE7	514 aa		12.68	□□□□□ -0.38
CLTCL1-205	ENST00000538828	METTL5	Q9NRN9	209 aa	Known RBP	12.68	□□□□□ -0.38
CLTCL1-205	ENST00000538828	WSB2	Q9NYS7	404 aa	Predicted RBP	12.68	□□□□□ -0.38
CLTCL1-205	ENST00000538828	TPX2	Q9ULW0	747 aa	Known RBP	12.68	□□□□□ -0.38
CLTCL1-205	ENST00000538828	ERVW-1	Q9UQF0	538 aa		12.68	□□□□□ -0.38
CLTCL1-205	ENST00000538828	RAD54B	Q9Y620	910 aa		12.68	□□□□□ -0.38
CLTCL1-205	ENST00000538828	DCHS1	Q96JQ0	3298 aa		12.67	□□□□□ -0.38
CLTCL1-205	ENST00000538828	ANKRD62	A6NC57	917 aa		12.67	□□□□□ -0.38
CLTCL1-205	ENST00000538828	LRRC53	A6NM62	1247 aa		12.67	□□□□□ -0.38
CLTCL1-205	ENST00000538828	EIF3CL	B5ME19	914 aa	Known RBP	12.67	□□□□□ -0.38
CLTCL1-205	ENST00000538828	GOLGA8S	H3BPF8	625 aa		12.67	□□□□□ -0.38
CLTCL1-205	ENST00000538828	SLC30A4	O14863	429 aa		12.67	□□□□□ -0.38
CLTCL1-205	ENST00000538828	TPM3	P06753	285 aa		12.67	□□□□□ -0.38
CLTCL1-205	ENST00000538828	ACADM	P11310	421 aa		12.67	□□□□□ -0.38
CLTCL1-205	ENST00000538828	TFE3	P19532	575 aa	Predicted RBP	12.67	□□□□□ -0.38
CLTCL1-205	ENST00000538828	TNFAIP3	P21580	790 aa		12.67	□□□□□ -0.38
CLTCL1-205	ENST00000538828	ADRA1B	P35368	520 aa		12.67	□□□□□ -0.38
CLTCL1-205	ENST00000538828	ZNF143	P52747	638 aa	Predicted RBP	12.67	□□□□□ -0.38
CLTCL1-205	ENST00000538828	SCAP	Q12770	1279 aa		12.67	□□□□□ -0.38
CLTCL1-205	ENST00000538828	CCDC14	Q49A88	953 aa		12.67	□□□□□ -0.38
CLTCL1-205	ENST00000538828	SFMBT2	Q5VUG0	894 aa		12.67	□□□□□ -0.38
CLTCL1-205	ENST00000538828	LYSMD4	Q5XG99	296 aa		12.67	□□□□□ -0.38
CLTCL1-205	ENST00000538828	LUZP1	Q86V48	1076 aa		12.67	□□□□□ -0.38
CLTCL1-205	ENST00000538828	C12orf50	Q8NA57	414 aa	Predicted RBP	12.67	□□□□□ -0.38
CLTCL1-205	ENST00000538828	FNIP1	Q8TF40	1166 aa		12.67	□□□□□ -0.38

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