RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 CD207Q9UJ71 328 aa14.56□□□□□ -0.08
CD4-208ENST00000538827 ZFHX2Q9C0A1 2572 aaPredicted RBP14.56□□□□□ -0.08
CD4-208ENST00000538827 NYNRINQ9P2P1 1898 aaKnown RBP14.55□□□□□ -0.08
CD4-208ENST00000538827 DOCK8Q8NF50 2099 aa14.55□□□□□ -0.08
CD4-208ENST00000538827 H7C0C1 242 aa14.55□□□□□ -0.08
CD4-208ENST00000538827 HOXC13P31276 330 aa14.55□□□□□ -0.08
CD4-208ENST00000538827 SERPINB6P35237 376 aa14.55□□□□□ -0.08
CD4-208ENST00000538827 ATP5OP48047 213 aa14.55□□□□□ -0.08
CD4-208ENST00000538827 HCAR3P49019 387 aa14.55□□□□□ -0.08
CD4-208ENST00000538827 EIF3EP60228 445 aaKnown RBP14.55□□□□□ -0.08
CD4-208ENST00000538827 MRPS25P82663 173 aaKnown RBP14.55□□□□□ -0.08
CD4-208ENST00000538827 NOMO1Q15155 1222 aa14.55□□□□□ -0.08
CD4-208ENST00000538827 ZNF77Q15935 545 aa14.55□□□□□ -0.08
CD4-208ENST00000538827 CTC1Q2NKJ3 1217 aa14.55□□□□□ -0.08
CD4-208ENST00000538827 ACBD5Q5T8D3 534 aaPredicted RBP14.55□□□□□ -0.08
CD4-208ENST00000538827 CCDC70Q6NSX1 233 aa14.55□□□□□ -0.08
CD4-208ENST00000538827 Q6ZNB5 142 aa14.55□□□□□ -0.08
CD4-208ENST00000538827 ERMP1Q7Z2K6 904 aa14.55□□□□□ -0.08
CD4-208ENST00000538827 ARID3BQ8IVW6 561 aaPredicted RBP14.55□□□□□ -0.08
CD4-208ENST00000538827 ADHFE1Q8IWW8 467 aa14.55□□□□□ -0.08
CD4-208ENST00000538827 CCDC105Q8IYK2 499 aa14.55□□□□□ -0.08
CD4-208ENST00000538827 ZNF683Q8IZ20 524 aa14.55□□□□□ -0.08
CD4-208ENST00000538827 CFAP52Q8N1V2 620 aa14.55□□□□□ -0.08
CD4-208ENST00000538827 RTL3Q8N8U3 475 aaKnown RBP14.55□□□□□ -0.08
CD4-208ENST00000538827 AZIN2Q96A70 460 aa14.55□□□□□ -0.08
CD4-208ENST00000538827 MYEOVQ96EZ4 313 aa14.55□□□□□ -0.08
CD4-208ENST00000538827 S1PR5Q9H228 398 aa14.55□□□□□ -0.08
CD4-208ENST00000538827 ZNF510Q9Y2H8 683 aa14.55□□□□□ -0.08
CD4-208ENST00000538827 TRIOO75962 3097 aa14.54□□□□□ -0.08
CD4-208ENST00000538827 E2F8A0AVK6 867 aa14.54□□□□□ -0.08
CD4-208ENST00000538827 H3BQ06 376 aaPredicted RBP14.54□□□□□ -0.08
CD4-208ENST00000538827 LIASO43766 372 aa14.54□□□□□ -0.08
CD4-208ENST00000538827 CNTN5O94779 1100 aa14.54□□□□□ -0.08
CD4-208ENST00000538827 RHOQP17081 205 aa14.54□□□□□ -0.08
CD4-208ENST00000538827 CHRNA3P32297 505 aa14.54□□□□□ -0.08
CD4-208ENST00000538827 LTBRP36941 435 aa14.54□□□□□ -0.08
CD4-208ENST00000538827 COILP38432 576 aaPredicted RBP14.54□□□□□ -0.08
CD4-208ENST00000538827 VIPR2P41587 438 aa14.54□□□□□ -0.08
CD4-208ENST00000538827 SGSHP51688 502 aa14.54□□□□□ -0.08
CD4-208ENST00000538827 PAFAH1B3Q15102 231 aaKnown RBP14.54□□□□□ -0.08
CD4-208ENST00000538827 ALFQ53S48 1182 aa14.54□□□□□ -0.08
CD4-208ENST00000538827 FAM78AQ5JUQ0 283 aa14.54□□□□□ -0.08
CD4-208ENST00000538827 ADGRF1Q5T601 910 aa14.54□□□□□ -0.08
CD4-208ENST00000538827 TTC27Q6P3X3 843 aa14.54□□□□□ -0.08
CD4-208ENST00000538827 CCDC137Q6PK04 289 aaKnown RBP14.54□□□□□ -0.08
CD4-208ENST00000538827 POTEHQ6S545 545 aa14.54□□□□□ -0.08
CD4-208ENST00000538827 B4GALNT4Q76KP1 1039 aa14.54□□□□□ -0.08
CD4-208ENST00000538827 ZC3H18Q86VM9 953 aaKnown RBP14.54□□□□□ -0.08
CD4-208ENST00000538827 CDKL3Q8IVW4 592 aaPredicted RBP14.54□□□□□ -0.08
CD4-208ENST00000538827 CELF5Q8N6W0 485 aaKnown RBP14.54□□□□□ -0.08
CD4-208ENST00000538827 NPWQ8N729 165 aa14.54□□□□□ -0.08
CD4-208ENST00000538827 C12orf50Q8NA57 414 aaPredicted RBP14.54□□□□□ -0.08
CD4-208ENST00000538827 HJURPQ8NCD3 748 aaPredicted RBP14.54□□□□□ -0.08
CD4-208ENST00000538827 ST13P5Q8NFI4 369 aaPredicted RBP14.54□□□□□ -0.08
CD4-208ENST00000538827 RIN3Q8TB24 985 aa14.54□□□□□ -0.08
CD4-208ENST00000538827 BHMTQ93088 406 aa14.54□□□□□ -0.08
CD4-208ENST00000538827 CELF6Q96J87 481 aaKnown RBP14.54□□□□□ -0.08
CD4-208ENST00000538827 MSLNLQ96KJ4 702 aa14.54□□□□□ -0.08
CD4-208ENST00000538827 RUNDC3BQ96NL0 473 aa14.54□□□□□ -0.08
CD4-208ENST00000538827 POMKQ9H5K3 350 aa14.54□□□□□ -0.08
CD4-208ENST00000538827 PRDM16Q9HAZ2 1276 aa14.54□□□□□ -0.08
CD4-208ENST00000538827 HOMER3Q9NSC5 361 aa14.54□□□□□ -0.08
CD4-208ENST00000538827 PPARGC1AQ9UBK2 798 aaKnown RBP14.54□□□□□ -0.08
CD4-208ENST00000538827 DNPEPQ9ULA0 475 aa14.54□□□□□ -0.08
CD4-208ENST00000538827 CDH7Q9ULB5 785 aa14.54□□□□□ -0.08
CD4-208ENST00000538827 ZFP37Q9Y6Q3 630 aaPredicted RBP14.54□□□□□ -0.08
CD4-208ENST00000538827 KIF26AQ9ULI4 1882 aaPredicted RBP14.53□□□□□ -0.08
CD4-208ENST00000538827 IGLV3-10A0A075B6K4 115 aa14.53□□□□□ -0.08
CD4-208ENST00000538827 DFFAO00273 331 aa14.53□□□□□ -0.08
CD4-208ENST00000538827 GREM1O60565 184 aa14.53□□□□□ -0.08
CD4-208ENST00000538827 TBL1XO60907 577 aa14.53□□□□□ -0.08
CD4-208ENST00000538827 RHOXF2BP0C7M4 288 aa14.53□□□□□ -0.08
CD4-208ENST00000538827 SP100P23497 879 aaPredicted RBP14.53□□□□□ -0.08
CD4-208ENST00000538827 KCNJ1P48048 391 aa14.53□□□□□ -0.08
CD4-208ENST00000538827 IFNAR2P48551 515 aa14.53□□□□□ -0.08
CD4-208ENST00000538827 FNTAP49354 379 aa14.53□□□□□ -0.08
CD4-208ENST00000538827 RPS24P62847 133 aaKnown RBP14.53□□□□□ -0.08
CD4-208ENST00000538827 BYSLQ13895 437 aaKnown RBP14.53□□□□□ -0.08
CD4-208ENST00000538827 CCNG2Q16589 344 aa14.53□□□□□ -0.08
CD4-208ENST00000538827 CYP1B1Q16678 543 aa14.53□□□□□ -0.08
CD4-208ENST00000538827 DARS2Q6PI48 645 aaKnown RBP14.53□□□□□ -0.08
CD4-208ENST00000538827 HTR3DQ70Z44 454 aa14.53□□□□□ -0.08
CD4-208ENST00000538827 GSTA5Q7RTV2 222 aa14.53□□□□□ -0.08
CD4-208ENST00000538827 ZNF354CQ86Y25 554 aa14.53□□□□□ -0.08
CD4-208ENST00000538827 MMGT1Q8N4V1 131 aa14.53□□□□□ -0.08
CD4-208ENST00000538827 TDRD5Q8NAT2 981 aaKnown RBP14.53□□□□□ -0.08
CD4-208ENST00000538827 LRRN4Q8WUT4 740 aa14.53□□□□□ -0.08
CD4-208ENST00000538827 SMARCD2Q92925 531 aa14.53□□□□□ -0.08
CD4-208ENST00000538827 ASB16Q96NS5 453 aa14.53□□□□□ -0.08
CD4-208ENST00000538827 MYADMQ96S97 322 aa14.53□□□□□ -0.08
CD4-208ENST00000538827 RHOXF2Q9BQY4 288 aa14.53□□□□□ -0.08
CD4-208ENST00000538827 FRMD8P1Q9BZ68 369 aaPredicted RBP14.53□□□□□ -0.08
CD4-208ENST00000538827 C10orf88Q9H8K7 445 aa14.53□□□□□ -0.08
CD4-208ENST00000538827 TMEM248Q9NWD8 314 aa14.53□□□□□ -0.08
CD4-208ENST00000538827 DTLQ9NZJ0 730 aa14.53□□□□□ -0.08
CD4-208ENST00000538827 AMACRQ9UHK6 382 aa14.53□□□□□ -0.08
CD4-208ENST00000538827 ZNF148Q9UQR1 794 aa14.53□□□□□ -0.08
CD4-208ENST00000538827 USP15Q9Y4E8 981 aaPredicted RBP14.53□□□□□ -0.08
CD4-208ENST00000538827 WNT6Q9Y6F9 365 aa14.53□□□□□ -0.08
CD4-208ENST00000538827 CACNA1HO95180 2353 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms