RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 APBA1Q02410 837 aa10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 STARD3Q14849 445 aa10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 SUZ12Q15022 739 aaKnown RBP10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 SYPL2Q5VXT5 272 aa10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 GJB7Q6PEY0 223 aa10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 CHST9Q7L1S5 443 aa10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 AHI1Q8N157 1196 aa10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 MLKLQ8NB16 471 aa10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 CADM4Q8NFZ8 388 aa10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 OR2T3Q8NH03 318 aa10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 FIBINQ8TAL6 211 aa10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 SHC3Q92529 594 aa10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 TTC17Q96AE7 1141 aa10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 SIPA1Q96FS4 1042 aa10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 TOE1Q96GM8 510 aaKnown RBP10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 PRICKLE1Q96MT3 831 aaPredicted RBP10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 SERPINB11Q96P15 392 aa10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 CRACR2AQ9BSW2 395 aa10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 CIPCQ9C0C6 399 aa10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 MIS12Q9H081 205 aa10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 SIX2Q9NPC8 291 aa10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 ABCB8Q9NUT2 735 aa10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 APEX2Q9UBZ4 518 aa10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 DACH1Q9UI36 760 aa10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 GGA2Q9UJY4 613 aa10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 INTS6Q9UL03 887 aaKnown RBP10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 PCDHGC3Q9UN70 934 aa10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 NYNRINQ9P2P1 1898 aaKnown RBP10.44□□□□□ -0.74
CLSTN3-203ENST00000534830 E5RJQ4 531 aa10.43□□□□□ -0.74
CLSTN3-203ENST00000534830 SART1O43290 800 aaKnown RBP10.43□□□□□ -0.74
CLSTN3-203ENST00000534830 SYNCRIPO60506 623 aaKnown RBP10.43□□□□□ -0.74
CLSTN3-203ENST00000534830 TBL1XO60907 577 aa10.43□□□□□ -0.74
CLSTN3-203ENST00000534830 LETM1O95202 739 aaPredicted RBP10.43□□□□□ -0.74
CLSTN3-203ENST00000534830 EPHX1P07099 455 aa10.43□□□□□ -0.74
CLSTN3-203ENST00000534830 DLDP09622 509 aaKnown RBP10.43□□□□□ -0.74
CLSTN3-203ENST00000534830 EXOC3L4Q17RC7 722 aa10.43□□□□□ -0.74
CLSTN3-203ENST00000534830 MS4A13Q5J8X5 152 aa10.43□□□□□ -0.74
CLSTN3-203ENST00000534830 C6orf118Q5T5N4 469 aa10.43□□□□□ -0.74
CLSTN3-203ENST00000534830 MBLAC2Q68D91 279 aa10.43□□□□□ -0.74
CLSTN3-203ENST00000534830 SERPINA13PQ6UXR4 307 aa10.43□□□□□ -0.74
CLSTN3-203ENST00000534830 GBP6Q6ZN66 633 aa10.43□□□□□ -0.74
CLSTN3-203ENST00000534830 TAC4Q86UU9 113 aa10.43□□□□□ -0.74
CLSTN3-203ENST00000534830 ZNF557Q8N988 423 aaPredicted RBP10.43□□□□□ -0.74
CLSTN3-203ENST00000534830 FAM181AQ8N9Y4 354 aa10.43□□□□□ -0.74
CLSTN3-203ENST00000534830 C1orf216Q8TAB5 229 aa10.43□□□□□ -0.74
CLSTN3-203ENST00000534830 CYB5D2Q8WUJ1 264 aa10.43□□□□□ -0.74
CLSTN3-203ENST00000534830 BAP1Q92560 729 aa10.43□□□□□ -0.74
CLSTN3-203ENST00000534830 PRCCQ92733 491 aaPredicted RBP10.43□□□□□ -0.74
CLSTN3-203ENST00000534830 GOLGA1Q92805 767 aa10.43□□□□□ -0.74
CLSTN3-203ENST00000534830 NUP58Q9BVL2 599 aa10.43□□□□□ -0.74
CLSTN3-203ENST00000534830 GPR174Q9BXC1 333 aa10.43□□□□□ -0.74
CLSTN3-203ENST00000534830 NUCKS1Q9H1E3 243 aaKnown RBP10.43□□□□□ -0.74
CLSTN3-203ENST00000534830 LHX5Q9H2C1 402 aa10.43□□□□□ -0.74
CLSTN3-203ENST00000534830 THAP9Q9H5L6 903 aa10.43□□□□□ -0.74
CLSTN3-203ENST00000534830 POPDC2Q9HBU9 364 aa10.43□□□□□ -0.74
CLSTN3-203ENST00000534830 ST7Q9NRC1 585 aa10.43□□□□□ -0.74
CLSTN3-203ENST00000534830 CHMP5Q9NZZ3 219 aa10.43□□□□□ -0.74
CLSTN3-203ENST00000534830 TJP2Q9UDY2 1190 aa10.43□□□□□ -0.74
CLSTN3-203ENST00000534830 XPO7Q9UIA9 1087 aaKnown RBP10.43□□□□□ -0.74
CLSTN3-203ENST00000534830 AJAP1Q9UKB5 411 aaPredicted RBP10.43□□□□□ -0.74
CLSTN3-203ENST00000534830 PLA2G4CQ9UP65 541 aa10.43□□□□□ -0.74
CLSTN3-203ENST00000534830 PCDHGB2Q9Y5G2 931 aa10.43□□□□□ -0.74
CLSTN3-203ENST00000534830 TMEM131Q92545 1883 aa10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 MGAQ8IWI9 3026 aa10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 METTL12A8MUP2 240 aa10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 KCNU1A8MYU2 1149 aa10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 C10orf142B7Z368 130 aa10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 THAP12O43422 761 aa10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 GLI1P08151 1106 aa10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 JUPP14923 745 aa10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 CLCN1P35523 988 aa10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 RPS24P62847 133 aaKnown RBP10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 YWHAZP63104 245 aaKnown RBP10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 CXADRP78310 365 aa10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 PITX1P78337 314 aaPredicted RBP10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 BNC1Q01954 994 aa10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 PDCLQ13371 301 aa10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 ARID5BQ14865 1188 aa10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 TAF5Q15542 800 aa10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 ARHGAP44Q17R89 818 aa10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 FSCBQ5H9T9 825 aa10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 MIIPQ5JXC2 388 aa10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 DCAF12L1Q5VU92 463 aa10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 PCSK4Q6UW60 755 aa10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 DBX2Q6ZNG2 339 aa10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 CLEC17AQ6ZS10 378 aa10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 TMPRSS12Q86WS5 348 aa10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 KDM1BQ8NB78 822 aa10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 FAM149B1Q96BN6 582 aa10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 MRGPRX3Q96LB0 322 aa10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 SLC2A13Q96QE2 648 aa10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 CPXM1Q96SM3 734 aa10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 PRMT1Q99873 361 aaKnown RBP10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 DDX50Q9BQ39 737 aaKnown RBP10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 TRIM62Q9BVG3 475 aa10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 CLSTN2Q9H4D0 955 aa10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 FBRSQ9HAH7 460 aa10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 PRSS16Q9NQE7 514 aa10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 ASNSD1Q9NWL6 643 aa10.42□□□□□ -0.74
CLSTN3-203ENST00000534830 ATMQ13315 3056 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms