RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 IL10P22301 178 aa12.69□□□□□ -0.38
RAD50-209ENST00000533482 MAXP61244 160 aa12.69□□□□□ -0.38
RAD50-209ENST00000533482 MFSD5Q6N075 450 aa12.69□□□□□ -0.38
RAD50-209ENST00000533482 C16orf59Q7L2K0 433 aa12.69□□□□□ -0.38
RAD50-209ENST00000533482 ALYREFQ86V81 257 aaKnown RBP12.69□□□□□ -0.38
RAD50-209ENST00000533482 PLD5Q8N7P1 536 aa12.69□□□□□ -0.38
RAD50-209ENST00000533482 SRRM3A6NNA2 597 aaPredicted RBP12.68□□□□□ -0.38
RAD50-209ENST00000533482 TULP2O00295 520 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 ALADP13716 330 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 RAG1P15918 1043 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 ITGB6P18564 788 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 MRPS35P82673 323 aaKnown RBP12.68□□□□□ -0.38
RAD50-209ENST00000533482 FUT11Q495W5 492 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 TMEM63BQ5T3F8 832 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 SNX19Q92543 992 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 BORCS6Q96GS4 357 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 DDX50Q9BQ39 737 aaKnown RBP12.68□□□□□ -0.38
RAD50-209ENST00000533482 UBXN6Q9BZV1 441 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 XPO1O14980 1071 aaKnown RBP12.68□□□□□ -0.38
RAD50-209ENST00000533482 MSI1O43347 362 aaKnown RBP12.68□□□□□ -0.38
RAD50-209ENST00000533482 RHOCP08134 193 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 NFKB1P19838 968 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 CNTFP26441 200 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 TBL3Q12788 808 aaKnown RBP12.68□□□□□ -0.38
RAD50-209ENST00000533482 CACUL1Q86Y37 369 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 PYROXD2Q8N2H3 581 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 CXorf38Q8TB03 319 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 RNF217Q8TC41 542 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 EXOC2Q96KP1 924 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 HSFY1Q96LI6 401 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 EBNA1BP2Q99848 306 aaKnown RBP12.68□□□□□ -0.38
RAD50-209ENST00000533482 PIF1Q9H611 641 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 MRPL40Q9NQ50 206 aaKnown RBP12.68□□□□□ -0.38
RAD50-209ENST00000533482 MPP6Q9NZW5 540 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 PADI3Q9ULW8 664 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 STK25O00506 426 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 C22orf31O95567 290 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 THRAP10827 490 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 MYL4P12829 197 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 NDUFV1P49821 464 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 RAB27AP51159 221 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 HADHBP55084 474 aaKnown RBP12.68□□□□□ -0.38
RAD50-209ENST00000533482 OXCT1P55809 520 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 AGKQ53H12 422 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 IYDQ6PHW0 289 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 LGI2Q8N0V4 545 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 ATAD1Q8NBU5 361 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 LMO3Q8TAP4 145 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 STK32AQ8WU08 396 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 PYDC1Q8WXC3 89 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 MRPS31Q92665 395 aaKnown RBP12.68□□□□□ -0.38
RAD50-209ENST00000533482 NKD2Q969F2 451 aaPredicted RBP12.68□□□□□ -0.38
RAD50-209ENST00000533482 DCUN1D1Q96GG9 259 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 TWNKQ96RR1 684 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 OMDQ99983 421 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 RNF39Q9H2S5 420 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 MARCH2Q9P0N8 246 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 SOX13Q9UN79 622 aa12.68□□□□□ -0.38
RAD50-209ENST00000533482 CICQ96RK0 1608 aaPredicted RBP12.68□□□□□ -0.38
RAD50-209ENST00000533482 KIAA0100Q14667 2235 aaKnown RBP12.68□□□□□ -0.38
RAD50-209ENST00000533482 SKIV2LQ15477 1246 aaKnown RBP12.67□□□□□ -0.38
RAD50-209ENST00000533482 DEFB115Q30KQ5 88 aa12.67□□□□□ -0.38
RAD50-209ENST00000533482 RAP1GAP2Q684P5 730 aa12.67□□□□□ -0.38
RAD50-209ENST00000533482 ARHGAP18Q8N392 663 aa12.67□□□□□ -0.38
RAD50-209ENST00000533482 PBXIP1Q96AQ6 731 aa12.67□□□□□ -0.38
RAD50-209ENST00000533482 P2RY11Q96G91 374 aa12.67□□□□□ -0.38
RAD50-209ENST00000533482 MARK4Q96L34 752 aa12.67□□□□□ -0.38
RAD50-209ENST00000533482 CNBD2Q96M20 576 aa12.67□□□□□ -0.38
RAD50-209ENST00000533482 LHX5Q9H2C1 402 aa12.67□□□□□ -0.38
RAD50-209ENST00000533482 EFCAB1Q9HAE3 211 aa12.67□□□□□ -0.38
RAD50-209ENST00000533482 NMRAL1Q9HBL8 299 aa12.67□□□□□ -0.38
RAD50-209ENST00000533482 NCKIPSDQ9NZQ3 722 aa12.67□□□□□ -0.38
RAD50-209ENST00000533482 GGA2Q9UJY4 613 aa12.67□□□□□ -0.38
RAD50-209ENST00000533482 CRYL1Q9Y2S2 319 aa12.67□□□□□ -0.38
RAD50-209ENST00000533482 MDM4O15151 490 aa12.67□□□□□ -0.38
RAD50-209ENST00000533482 HCRTO43612 131 aa12.67□□□□□ -0.38
RAD50-209ENST00000533482 EDIL3O43854 480 aa12.67□□□□□ -0.38
RAD50-209ENST00000533482 RGS20O76081 388 aa12.67□□□□□ -0.38
RAD50-209ENST00000533482 MTA2O94776 668 aa12.67□□□□□ -0.38
RAD50-209ENST00000533482 IL1R2P27930 398 aa12.67□□□□□ -0.38
RAD50-209ENST00000533482 CLCNKBP51801 687 aa12.67□□□□□ -0.38
RAD50-209ENST00000533482 CYLC2Q14093 348 aaPredicted RBP12.67□□□□□ -0.38
RAD50-209ENST00000533482 NOMO1Q15155 1222 aa12.67□□□□□ -0.38
RAD50-209ENST00000533482 RNASEH2BQ5TBB1 312 aaKnown RBP12.67□□□□□ -0.38
RAD50-209ENST00000533482 CIPCQ9C0C6 399 aa12.67□□□□□ -0.38
RAD50-209ENST00000533482 CASS4Q9NQ75 786 aa12.67□□□□□ -0.38
RAD50-209ENST00000533482 CRLS1Q9UJA2 301 aa12.67□□□□□ -0.38
RAD50-209ENST00000533482 DTNAQ9Y4J8 743 aa12.67□□□□□ -0.38
RAD50-209ENST00000533482 PTPRJQ12913 1337 aa12.67□□□□□ -0.38
RAD50-209ENST00000533482 PPEF2O14830 753 aa12.67□□□□□ -0.38
RAD50-209ENST00000533482 KRT36O76013 467 aa12.67□□□□□ -0.38
RAD50-209ENST00000533482 SRP72O76094 671 aaKnown RBP12.67□□□□□ -0.38
RAD50-209ENST00000533482 PIGNO95427 931 aa12.67□□□□□ -0.38
RAD50-209ENST00000533482 ESRRBO95718 433 aa12.67□□□□□ -0.38
RAD50-209ENST00000533482 PKNOX1P55347 436 aa12.67□□□□□ -0.38
RAD50-209ENST00000533482 PARP6Q2NL67 630 aa12.67□□□□□ -0.38
RAD50-209ENST00000533482 PCYOX1LQ8NBM8 494 aa12.67□□□□□ -0.38
RAD50-209ENST00000533482 PIWIL2Q8TC59 973 aaKnown RBP12.67□□□□□ -0.38
RAD50-209ENST00000533482 CLEC4CQ8WTT0 213 aa12.67□□□□□ -0.38
RAD50-209ENST00000533482 SH3KBP1Q96B97 665 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms