RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 EPN1Q9Y6I3 576 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC4-212ENST00000533058 STON1Q9Y6Q2 735 aa13.38□□□□□ -0.27
TRAPPC4-212ENST00000533058 GOLGA6L7A0A1B0GV03 622 aa13.37□□□□□ -0.27
TRAPPC4-212ENST00000533058 TYW5A2RUC4 315 aaKnown RBP13.37□□□□□ -0.27
TRAPPC4-212ENST00000533058 C2CD4BA6NLJ0 364 aa13.37□□□□□ -0.27
TRAPPC4-212ENST00000533058 TBL1XO60907 577 aa13.37□□□□□ -0.27
TRAPPC4-212ENST00000533058 ZNF217O75362 1048 aa13.37□□□□□ -0.27
TRAPPC4-212ENST00000533058 NDUFA10O95299 355 aa13.37□□□□□ -0.27
TRAPPC4-212ENST00000533058 F9P00740 461 aa13.37□□□□□ -0.27
TRAPPC4-212ENST00000533058 ZNF806P0C7X5 589 aa13.37□□□□□ -0.27
TRAPPC4-212ENST00000533058 FECHP22830 423 aa13.37□□□□□ -0.27
TRAPPC4-212ENST00000533058 PSMA2P25787 234 aa13.37□□□□□ -0.27
TRAPPC4-212ENST00000533058 CCR1P32246 355 aa13.37□□□□□ -0.27
TRAPPC4-212ENST00000533058 MAGEA1P43355 309 aa13.37□□□□□ -0.27
TRAPPC4-212ENST00000533058 ID4P47928 161 aa13.37□□□□□ -0.27
TRAPPC4-212ENST00000533058 RPL7AP62424 266 aaKnown RBP13.37□□□□□ -0.27
TRAPPC4-212ENST00000533058 SPEM2Q0P670 501 aa13.37□□□□□ -0.27
TRAPPC4-212ENST00000533058 ZC3H12AQ5D1E8 599 aaKnown RBP13.37□□□□□ -0.27
TRAPPC4-212ENST00000533058 PLA2G2CQ5R387 149 aa13.37□□□□□ -0.27
TRAPPC4-212ENST00000533058 RFWD3Q6PCD5 774 aa13.37□□□□□ -0.27
TRAPPC4-212ENST00000533058 ADIPOR2Q86V24 386 aa13.37□□□□□ -0.27
TRAPPC4-212ENST00000533058 AHI1Q8N157 1196 aa13.37□□□□□ -0.27
TRAPPC4-212ENST00000533058 ATP6V0D2Q8N8Y2 350 aa13.37□□□□□ -0.27
TRAPPC4-212ENST00000533058 CCDC112Q8NEF3 446 aa13.37□□□□□ -0.27
TRAPPC4-212ENST00000533058 HMGB4Q8WW32 186 aa13.37□□□□□ -0.27
TRAPPC4-212ENST00000533058 PGAP3Q96FM1 320 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC4-212ENST00000533058 LMLNQ96KR4 655 aa13.37□□□□□ -0.27
TRAPPC4-212ENST00000533058 SPACA7Q96KW9 195 aa13.37□□□□□ -0.27
TRAPPC4-212ENST00000533058 NPY6RQ99463 290 aa13.37□□□□□ -0.27
TRAPPC4-212ENST00000533058 CACNA2D2Q9NY47 1150 aa13.37□□□□□ -0.27
TRAPPC4-212ENST00000533058 BCCIPQ9P287 314 aaKnown RBP eCLIP13.37□□□□□ -0.27
TRAPPC4-212ENST00000533058 GGA2Q9UJY4 613 aa13.37□□□□□ -0.27
TRAPPC4-212ENST00000533058 USP18Q9UMW8 372 aa13.37□□□□□ -0.27
TRAPPC4-212ENST00000533058 NENFQ9UMX5 172 aa13.37□□□□□ -0.27
TRAPPC4-212ENST00000533058 BCLAF3A2AJT9 711 aaKnown RBP13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 EIF3CLB5ME19 914 aaKnown RBP13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 WASH3PC4AMC7 463 aa13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 DCLK1O15075 740 aa13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 CYP1A2P05177 515 aa13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 ATP5BP06576 529 aaKnown RBP13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 TMEM253P0C7T8 217 aa13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 PABPC1P11940 636 aaKnown RBP13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 TFE3P19532 575 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 RDXP35241 583 aaKnown RBP13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 IL12RB1P42701 662 aa13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 WASP42768 502 aa13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 SGSHP51688 502 aa13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 ZNF143P52747 638 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 ZNF234Q14588 700 aa13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 PUM1Q14671 1186 aaKnown RBP eCLIP13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 STARD3Q14849 445 aa13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 C15orf59Q2T9L4 293 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 CCDC14Q49A88 953 aa13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 ACBD5Q5T8D3 534 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 TRNP1Q6NT89 227 aa13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 KIAA1211LQ6NV74 962 aa13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 RAD9BQ6WBX8 426 aa13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 PRR23CQ6ZRP0 262 aa13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 CHST9Q7L1S5 443 aa13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 KIAA1328Q86T90 577 aa13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 MFN1Q8IWA4 741 aa13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 PGBD3Q8N328 593 aa13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 KDM1BQ8NB78 822 aa13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 ARHGEF26Q96DR7 871 aa13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 MRGPRX1Q96LB2 322 aa13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 PRICKLE1Q96MT3 831 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 EIF3CQ99613 913 aaKnown RBP13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 PRMT1Q99873 361 aaKnown RBP13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 CIPCQ9C0C6 399 aa13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 ARRDC1-AS1Q9H2J1 176 aa13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 TMEM245Q9H330 911 aa13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 VPS45Q9NRW7 570 aa13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 ABCB8Q9NUT2 735 aa13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 PLA2G4CQ9UP65 541 aa13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 PAXBP1Q9Y5B6 917 aa13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 PCDHA13Q9Y5I0 950 aa13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 SPTBN4Q9H254 2564 aa13.36□□□□□ -0.27
TRAPPC4-212ENST00000533058 TCRBV5S1A1TA0A578 114 aa13.35□□□□□ -0.27
TRAPPC4-212ENST00000533058 CCP110O43303 1012 aa13.35□□□□□ -0.27
TRAPPC4-212ENST00000533058 DLDP09622 509 aaKnown RBP13.35□□□□□ -0.27
TRAPPC4-212ENST00000533058 NDUFV2P19404 249 aa13.35□□□□□ -0.27
TRAPPC4-212ENST00000533058 TACR2P21452 398 aa13.35□□□□□ -0.27
TRAPPC4-212ENST00000533058 BCKDHBP21953 392 aa13.35□□□□□ -0.27
TRAPPC4-212ENST00000533058 DPP6P42658 865 aa13.35□□□□□ -0.27
TRAPPC4-212ENST00000533058 PTPN9P43378 593 aa13.35□□□□□ -0.27
TRAPPC4-212ENST00000533058 RPS24P62847 133 aaKnown RBP13.35□□□□□ -0.27
TRAPPC4-212ENST00000533058 KRT83P78385 493 aa13.35□□□□□ -0.27
TRAPPC4-212ENST00000533058 FUT11Q495W5 492 aa13.35□□□□□ -0.27
TRAPPC4-212ENST00000533058 C5orf22Q49AR2 442 aa13.35□□□□□ -0.27
TRAPPC4-212ENST00000533058 PPP1R15BQ5SWA1 713 aa13.35□□□□□ -0.27
TRAPPC4-212ENST00000533058 TTC39BQ5VTQ0 682 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC4-212ENST00000533058 MBLAC2Q68D91 279 aa13.35□□□□□ -0.27
TRAPPC4-212ENST00000533058 SCYL2Q6P3W7 929 aa13.35□□□□□ -0.27
TRAPPC4-212ENST00000533058 SLC36A4Q6YBV0 504 aa13.35□□□□□ -0.27
TRAPPC4-212ENST00000533058 FAM131BQ86XD5 332 aa13.35□□□□□ -0.27
TRAPPC4-212ENST00000533058 CCDC117Q8IWD4 279 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC4-212ENST00000533058 LRRC8AQ8IWT6 810 aa13.35□□□□□ -0.27
TRAPPC4-212ENST00000533058 ACRBPQ8NEB7 543 aa13.35□□□□□ -0.27
TRAPPC4-212ENST00000533058 ZNF564Q8TBZ8 553 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC4-212ENST00000533058 FAM172AQ8WUF8 416 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms