RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 SKIV2LQ15477 1246 aaKnown RBP6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 OGFOD2Q6N063 350 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 NEK5Q6P3R8 708 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 XKR5Q6UX68 686 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 ZDHHC24Q6UX98 284 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 Q6ZNX1 250 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 KIAA0895Q8NCT3 520 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 PNMA5Q96PV4 448 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 FAM118BQ9BPY3 351 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 CERS4Q9HA82 394 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 GRHL1Q9NZI5 618 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 ATP6V1HQ9UI12 483 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 MID2Q9UJV3 735 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 UBIAD1Q9Y5Z9 338 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 MYH7BA7E2Y1 1941 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 ILVBLA1L0T0 632 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 PRR5-ARHGAP8B1AHC4 643 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 HBP1O60381 514 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 CCNKO75909 580 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 ABHD2P08910 425 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 PABPC1P11940 636 aaKnown RBP6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 CCL5P13501 91 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 RARRES1P49788 294 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 PSEN2P49810 448 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 ARHGAP8P85298 464 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 MORF4L2Q15014 288 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 SUZ12Q15022 739 aaKnown RBP6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 CARTPTQ16568 116 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 AMHR2Q16671 573 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 JADE1Q6IE81 842 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 C11orf63Q6NUN7 778 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 C4orf22Q6V702 233 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 MINDY2Q8NBR6 621 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 MCPH1Q8NEM0 835 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 CNDP1Q96KN2 507 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 MTG1Q9BT17 334 aaPredicted RBP6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 WRAP73Q9P2S5 460 aaPredicted RBP6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 ATPIF1Q9UII2 106 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 NR2E1Q9Y466 385 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 ORC6Q9Y5N6 252 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 BCORQ6W2J9 1755 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 PLIN4Q96Q06 1357 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 ARPC4-TTLL3A0A0A6YYG9 625 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 KLRC4O43908 158 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 PSMD10O75832 226 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 H6PDO95479 791 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 PRKCBP05771 671 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 RFX1P22670 979 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 PON1P27169 355 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 IL12RB1P42701 662 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 MSLNQ13421 630 aaPredicted RBP6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 EFTUD2Q15029 972 aaKnown RBP eCLIP6.94□□□□□ -1.35e-6■■■■□ 20.9
TGFBR3-209ENST00000532540 PDK1Q15118 436 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 MOGQ16653 247 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 CLPPQ16740 277 aaPredicted RBP6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 HADHQ16836 314 aaKnown RBP6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 DUSP28Q4G0W2 176 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 IQSEC1Q6DN90 963 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 DENND5BQ6ZUT9 1274 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 NEK10Q6ZWH5 1172 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 TTC7BQ86TV6 843 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 ZNF410Q86VK4 478 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 LRRC49Q8IUZ0 686 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 ARHGEF19Q8IW93 802 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 NDUFAF2Q8N183 169 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 LRRC57Q8N9N7 239 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 POC5Q8NA72 575 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 KYQ8NBH2 561 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 GOLM1Q8NBJ4 401 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 GRPEL2Q8TAA5 225 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 DEPDC1BQ8WUY9 529 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 GLMNQ92990 594 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 FAM167AQ96KS9 214 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 PANX3Q96QZ0 392 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 POP1Q99575 1024 aaKnown RBP6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 MIPEPQ99797 713 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 INTS2Q9H0H0 1204 aaKnown RBP6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 TBC1D14Q9P2M4 693 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 VPS51Q9UID3 782 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 GTF3C4Q9UKN8 822 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 DNAJC16Q9Y2G8 782 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 STK24Q9Y6E0 443 aa6.94□□□□□ -1.3
TGFBR3-209ENST00000532540 CASZ1Q86V15 1759 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 KPNA7A9QM74 516 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 SPATA31C2B4DYI2 1134 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 H7C0C1 242 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 M0QX08 132 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 DGAT1O75907 488 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 RGS20O76081 388 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 ALBP02768 609 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 TCEA1P23193 301 aaKnown RBP6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 ME2P23368 584 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 VARSP26640 1264 aaKnown RBP6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 ATP5OP48047 213 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 MGAT5Q09328 741 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 PTK6Q13882 451 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 TAF12Q16514 161 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 ANO4Q32M45 955 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 PDPK2PQ6A1A2 396 aa6.93□□□□□ -1.3
TGFBR3-209ENST00000532540 KIAA1841Q6NSI8 718 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms