RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 KCNK16Q96T55 309 aa17.64■□□□□ 0.41
BRCA2-204ENST00000530893 GAD1Q99259 594 aa17.64■□□□□ 0.41
BRCA2-204ENST00000530893 GBA3Q9H227 469 aa17.64■□□□□ 0.41
BRCA2-204ENST00000530893 CASS4Q9NQ75 786 aa17.64■□□□□ 0.41
BRCA2-204ENST00000530893 TAS2R1Q9NYW7 299 aa17.64■□□□□ 0.41
BRCA2-204ENST00000530893 VANGL2Q9ULK5 521 aa17.64■□□□□ 0.41
BRCA2-204ENST00000530893 HHLA1C9JL84 531 aa17.63■□□□□ 0.41
BRCA2-204ENST00000530893 F5H423 210 aaPredicted RBP17.63■□□□□ 0.41
BRCA2-204ENST00000530893 KCNK1O00180 336 aa17.63■□□□□ 0.41
BRCA2-204ENST00000530893 DUSP11O75319 330 aaKnown RBP17.63■□□□□ 0.41
BRCA2-204ENST00000530893 SERPINA6P08185 405 aa17.63■□□□□ 0.41
BRCA2-204ENST00000530893 USP17L7P0C7H9 530 aa17.63■□□□□ 0.41
BRCA2-204ENST00000530893 GM2AP17900 193 aa17.63■□□□□ 0.41
BRCA2-204ENST00000530893 CYP2B6P20813 491 aa17.63■□□□□ 0.41
BRCA2-204ENST00000530893 AQP5P55064 265 aa17.63■□□□□ 0.41
BRCA2-204ENST00000530893 GALNT2Q10471 571 aa17.63■□□□□ 0.41
BRCA2-204ENST00000530893 N4BP2L1Q5TBK1 243 aaPredicted RBP17.63■□□□□ 0.41
BRCA2-204ENST00000530893 BSPRYQ5W0U4 402 aa17.63■□□□□ 0.41
BRCA2-204ENST00000530893 KCTD11Q693B1 232 aa17.63■□□□□ 0.41
BRCA2-204ENST00000530893 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.63■□□□□ 0.41
BRCA2-204ENST00000530893 PIWIL2Q8TC59 973 aaKnown RBP17.63■□□□□ 0.41
BRCA2-204ENST00000530893 MTG1Q9BT17 334 aaPredicted RBP17.63■□□□□ 0.41
BRCA2-204ENST00000530893 WDCPQ9H6R7 721 aa17.63■□□□□ 0.41
BRCA2-204ENST00000530893 EMCNQ9ULC0 261 aa17.63■□□□□ 0.41
BRCA2-204ENST00000530893 CCDC195A0A1B0GUA6 201 aa17.62■□□□□ 0.41
BRCA2-204ENST00000530893 ARL5CA6NH57 179 aa17.62■□□□□ 0.41
BRCA2-204ENST00000530893 CYP2C18P33260 490 aa17.62■□□□□ 0.41
BRCA2-204ENST00000530893 SPRP35270 261 aaPredicted RBP17.62■□□□□ 0.41
BRCA2-204ENST00000530893 MAGEA12P43365 314 aa17.62■□□□□ 0.41
BRCA2-204ENST00000530893 NPY2RP49146 381 aa17.62■□□□□ 0.41
BRCA2-204ENST00000530893 CDK7P50613 346 aa17.62■□□□□ 0.41
BRCA2-204ENST00000530893 TAF1CQ15572 869 aaPredicted RBP17.62■□□□□ 0.41
BRCA2-204ENST00000530893 CCDC153Q494R4 210 aa17.62■□□□□ 0.41
BRCA2-204ENST00000530893 HSF5Q4G112 596 aaPredicted RBP17.62■□□□□ 0.41
BRCA2-204ENST00000530893 PM20D1Q6GTS8 502 aa17.62■□□□□ 0.41
BRCA2-204ENST00000530893 BEND5Q7L4P6 421 aa17.62■□□□□ 0.41
BRCA2-204ENST00000530893 GPRIN1Q7Z2K8 1008 aa17.62■□□□□ 0.41
BRCA2-204ENST00000530893 ALYREFQ86V81 257 aaKnown RBP17.62■□□□□ 0.41
BRCA2-204ENST00000530893 TMPRSS6Q8IU80 811 aa17.62■□□□□ 0.41
BRCA2-204ENST00000530893 ADAM32Q8TC27 787 aa17.62■□□□□ 0.41
BRCA2-204ENST00000530893 N4BP2L2Q92802 583 aaPredicted RBP17.62■□□□□ 0.41
BRCA2-204ENST00000530893 MYCBPQ99417 103 aaPredicted RBP17.62■□□□□ 0.41
BRCA2-204ENST00000530893 ANLNQ9NQW6 1124 aa17.62■□□□□ 0.41
BRCA2-204ENST00000530893 PSAT1Q9Y617 370 aa17.62■□□□□ 0.41
BRCA2-204ENST00000530893 TRPM7Q96QT4 1865 aa17.62■□□□□ 0.41
BRCA2-204ENST00000530893 MEIS3P2A8K0S8 358 aa17.62■□□□□ 0.41
BRCA2-204ENST00000530893 I6L893 689 aaPredicted RBP17.62■□□□□ 0.41
BRCA2-204ENST00000530893 GPR182O15218 404 aa17.62■□□□□ 0.41
BRCA2-204ENST00000530893 SERPINE1P05121 402 aa17.62■□□□□ 0.41
BRCA2-204ENST00000530893 ODC1P11926 461 aa17.62■□□□□ 0.41
BRCA2-204ENST00000530893 TYK2P29597 1187 aa17.62■□□□□ 0.41
BRCA2-204ENST00000530893 DCLRE1AQ6PJP8 1040 aa17.62■□□□□ 0.41
BRCA2-204ENST00000530893 BHLHA9Q7RTU4 235 aa17.62■□□□□ 0.41
BRCA2-204ENST00000530893 MRPL10Q7Z7H8 261 aaKnown RBP17.62■□□□□ 0.41
BRCA2-204ENST00000530893 TTC7BQ86TV6 843 aa17.62■□□□□ 0.41
BRCA2-204ENST00000530893 TEX9Q8N6V9 391 aa17.62■□□□□ 0.41
BRCA2-204ENST00000530893 OR52K1Q8NGK4 314 aa17.62■□□□□ 0.41
BRCA2-204ENST00000530893 PRR11Q96HE9 360 aaPredicted RBP17.62■□□□□ 0.41
BRCA2-204ENST00000530893 RBBP8Q99708 897 aa17.62■□□□□ 0.41
BRCA2-204ENST00000530893 GORASP1Q9BQQ3 440 aa17.62■□□□□ 0.41
BRCA2-204ENST00000530893 ACBD6Q9BR61 282 aa17.62■□□□□ 0.41
BRCA2-204ENST00000530893 C20orf27Q9GZN8 174 aa17.62■□□□□ 0.41
BRCA2-204ENST00000530893 SENP6Q9GZR1 1112 aaPredicted RBP17.62■□□□□ 0.41
BRCA2-204ENST00000530893 PPARGC1AQ9UBK2 798 aaKnown RBP17.62■□□□□ 0.41
BRCA2-204ENST00000530893 C2orf71A6NGG8 1288 aa17.61■□□□□ 0.41
BRCA2-204ENST00000530893 MANSC4A6NHS7 340 aaPredicted RBP17.61■□□□□ 0.41
BRCA2-204ENST00000530893 PSMD3O43242 534 aa17.61■□□□□ 0.41
BRCA2-204ENST00000530893 FGF3P11487 239 aaPredicted RBP17.61■□□□□ 0.41
BRCA2-204ENST00000530893 SERPINB8P50452 374 aa17.61■□□□□ 0.41
BRCA2-204ENST00000530893 UPP1Q16831 310 aa17.61■□□□□ 0.41
BRCA2-204ENST00000530893 C17orf99Q6UX52 265 aa17.61■□□□□ 0.41
BRCA2-204ENST00000530893 RINLQ6ZS11 566 aa17.61■□□□□ 0.41
BRCA2-204ENST00000530893 NPWQ8N729 165 aa17.61■□□□□ 0.41
BRCA2-204ENST00000530893 MAB21L3Q8N8X9 362 aa17.61■□□□□ 0.41
BRCA2-204ENST00000530893 DNAAF3Q8N9W5 541 aa17.61■□□□□ 0.41
BRCA2-204ENST00000530893 NETO2Q8NC67 525 aa17.61■□□□□ 0.41
BRCA2-204ENST00000530893 IL22Q9GZX6 179 aa17.61■□□□□ 0.41
BRCA2-204ENST00000530893 BATF3Q9NR55 127 aa17.61■□□□□ 0.41
BRCA2-204ENST00000530893 PIH1D1Q9NWS0 290 aaKnown RBP17.61■□□□□ 0.41
BRCA2-204ENST00000530893 NKX1-2Q9UD57 310 aaPredicted RBP17.61■□□□□ 0.41
BRCA2-204ENST00000530893 OR12D3Q9UGF7 316 aa17.61■□□□□ 0.41
BRCA2-204ENST00000530893 ZBTB24O43167 697 aaPredicted RBP17.6■□□□□ 0.41
BRCA2-204ENST00000530893 MAGEC1O60732 1142 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 PROCP04070 461 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 RPSAP08865 295 aaKnown RBP17.6■□□□□ 0.41
BRCA2-204ENST00000530893 ERVK-10P10266 1014 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 IBSPP21815 317 aaPredicted RBP17.6■□□□□ 0.41
BRCA2-204ENST00000530893 IGFBP6P24592 240 aaPredicted RBP17.6■□□□□ 0.41
BRCA2-204ENST00000530893 SLC1A6P48664 564 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 RAB27AP51159 221 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 LIMK2P53671 638 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 COG7P83436 770 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 PCLAFQ15004 111 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 FAM171BQ6P995 826 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 METTL23Q86XA0 190 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 TP53INP2Q8IXH6 220 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.6■□□□□ 0.41
BRCA2-204ENST00000530893 C3orf58Q8NDZ4 430 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 PPP4R1Q8TF05 950 aa17.6■□□□□ 0.41
BRCA2-204ENST00000530893 TKTL2Q9H0I9 626 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms