RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 RSPH9Q9H1X1 276 aaPredicted RBP9.6□□□□□ -0.87
CTNND1-213ENST00000526357 CDC42EP4Q9H3Q1 356 aaKnown RBP9.6□□□□□ -0.87
CTNND1-213ENST00000526357 PRDM8Q9NQV8 689 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 SPG21Q9NZD8 308 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 CORO2BQ9UQ03 480 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 AXIN2Q9Y2T1 843 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 PCDHA3Q9Y5H8 950 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 PTGES3LE9PB15 166 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 THP07101 528 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 XRCC4Q13426 336 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 GLRA4Q5JXX5 417 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 WDR49Q8IV35 697 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 TMEM176AQ96HP8 235 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 TBL1YQ9BQ87 522 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 FBXO44Q9H4M3 255 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 TRHDEQ9UKU6 1024 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 RBM7Q9Y580 266 aaKnown RBP9.6□□□□□ -0.87
CTNND1-213ENST00000526357 LYVE1Q9Y5Y7 322 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 A0A0A6YYK5 440 aaPredicted RBP9.6□□□□□ -0.87
CTNND1-213ENST00000526357 SGTAO43765 313 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 LTFP02788 710 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 PRLRP16471 622 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 ME2P23368 584 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 ADARP55265 1226 aaKnown RBP9.6□□□□□ -0.87
CTNND1-213ENST00000526357 DSELQ8IZU8 1212 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 ZFP28Q8NHY6 868 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 METTL6Q8TCB7 284 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 FNIP1Q8TF40 1166 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 FAM151AQ8WW52 585 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 UBE2E3Q969T4 207 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 OXNAD1Q96HP4 312 aaPredicted RBP9.6□□□□□ -0.87
CTNND1-213ENST00000526357 DCUN1D5Q9BTE7 237 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 MTMR12Q9C0I1 747 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 RBM22Q9NW64 420 aaKnown RBP eCLIP9.6□□□□□ -0.873e-6■■■■□ 26.3
CTNND1-213ENST00000526357 ANKDD1BA6NHY2 528 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 MSH4O15457 936 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 GRIN3BO60391 1043 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 CYP11B1P15538 503 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 PTPN1P18031 435 aaKnown RBP9.6□□□□□ -0.87
CTNND1-213ENST00000526357 MYL9P24844 172 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 GTF2A2P52657 109 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 ACLYP53396 1101 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 MTAPQ13126 283 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 MSLNQ13421 630 aaPredicted RBP9.6□□□□□ -0.87
CTNND1-213ENST00000526357 PYDC2Q56P42 97 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 OLFML2AQ68BL7 652 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 PGBD2Q6P3X8 592 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 TSHZ1Q6ZSZ6 1077 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 PALB2Q86YC2 1186 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 LRRC17Q8N6Y2 441 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 TBC1D16Q8TBP0 767 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 APOL2Q9BQE5 337 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 SLC25A23Q9BV35 468 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 C1QTNF1Q9BXJ1 281 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 KANSL3Q9P2N6 904 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 ZMYM5Q9UJ78 669 aa9.6□□□□□ -0.87
CTNND1-213ENST00000526357 RECQL5O94762 991 aaPredicted RBP9.59□□□□□ -0.87
CTNND1-213ENST00000526357 LYNP07948 512 aa9.59□□□□□ -0.87
CTNND1-213ENST00000526357 SMIM11AP58511 58 aa9.59□□□□□ -0.87
CTNND1-213ENST00000526357 ITGADQ13349 1161 aa9.59□□□□□ -0.87
CTNND1-213ENST00000526357 BOP1Q14137 746 aaKnown RBP9.59□□□□□ -0.87
CTNND1-213ENST00000526357 TCHHL1Q5QJ38 904 aaPredicted RBP9.59□□□□□ -0.87
CTNND1-213ENST00000526357 FAM171BQ6P995 826 aa9.59□□□□□ -0.87
CTNND1-213ENST00000526357 GLT6D1Q7Z4J2 308 aa9.59□□□□□ -0.87
CTNND1-213ENST00000526357 ARHGAP22Q7Z5H3 698 aa9.59□□□□□ -0.87
CTNND1-213ENST00000526357 DLG3Q92796 817 aa9.59□□□□□ -0.87
CTNND1-213ENST00000526357 NRDE2Q9H7Z3 1164 aa9.59□□□□□ -0.87
CTNND1-213ENST00000526357 FKBP14Q9NWM8 211 aa9.59□□□□□ -0.87
CTNND1-213ENST00000526357 SNX6Q9UNH7 406 aa9.59□□□□□ -0.87
CTNND1-213ENST00000526357 CEP170Q5SW79 1584 aa9.59□□□□□ -0.87
CTNND1-213ENST00000526357 PDHBP11177 359 aa9.59□□□□□ -0.87
CTNND1-213ENST00000526357 HOXB8P17481 243 aaPredicted RBP9.59□□□□□ -0.87
CTNND1-213ENST00000526357 CXCR2P25025 360 aa9.59□□□□□ -0.87
CTNND1-213ENST00000526357 GP5P40197 560 aa9.59□□□□□ -0.87
CTNND1-213ENST00000526357 CDK7P50613 346 aa9.59□□□□□ -0.87
CTNND1-213ENST00000526357 ORC1Q13415 861 aa9.59□□□□□ -0.87
CTNND1-213ENST00000526357 FRG1Q14331 258 aaKnown RBP9.59□□□□□ -0.87
CTNND1-213ENST00000526357 ZDHHC17Q8IUH5 632 aa9.59□□□□□ -0.87
CTNND1-213ENST00000526357 CCDC36Q8IYA8 594 aa9.59□□□□□ -0.87
CTNND1-213ENST00000526357 AADATQ8N5Z0 425 aa9.59□□□□□ -0.87
CTNND1-213ENST00000526357 TMEM121Q9BTD3 319 aa9.59□□□□□ -0.87
CTNND1-213ENST00000526357 ISCA1Q9BUE6 129 aa9.59□□□□□ -0.87
CTNND1-213ENST00000526357 POMKQ9H5K3 350 aa9.59□□□□□ -0.87
CTNND1-213ENST00000526357 ELL3Q9HB65 397 aaPredicted RBP9.59□□□□□ -0.87
CTNND1-213ENST00000526357 PTGFRNQ9P2B2 879 aa9.59□□□□□ -0.87
CTNND1-213ENST00000526357 RPS6KA6Q9UK32 745 aa9.59□□□□□ -0.87
CTNND1-213ENST00000526357 STX16-NPEPL1H3BU86 382 aa9.59□□□□□ -0.87
CTNND1-213ENST00000526357 STX16O14662 325 aa9.59□□□□□ -0.87
CTNND1-213ENST00000526357 PRODHO43272 600 aa9.59□□□□□ -0.87
CTNND1-213ENST00000526357 PROSCO94903 275 aa9.59□□□□□ -0.87
CTNND1-213ENST00000526357 GZMAP12544 262 aa9.59□□□□□ -0.87
CTNND1-213ENST00000526357 TTKP33981 857 aa9.59□□□□□ -0.87
CTNND1-213ENST00000526357 TKTL1P51854 596 aa9.59□□□□□ -0.87
CTNND1-213ENST00000526357 NFE2Q16621 373 aaPredicted RBP9.59□□□□□ -0.87
CTNND1-213ENST00000526357 CDC42EP5Q6NZY7 148 aa9.59□□□□□ -0.87
CTNND1-213ENST00000526357 RBM43Q6ZSC3 357 aaKnown RBP9.59□□□□□ -0.87
CTNND1-213ENST00000526357 CXXC5Q7LFL8 322 aaKnown RBP9.59□□□□□ -0.87
CTNND1-213ENST00000526357 ARMC8Q8IUR7 673 aa9.59□□□□□ -0.87
CTNND1-213ENST00000526357 CSGALNACT1Q8TDX6 532 aa9.59□□□□□ -0.87
CTNND1-213ENST00000526357 APOPT1Q96IL0 206 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms