RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 JDP2Q8WYK2 163 aa4.56□□□□□ -1.68
CSDE1-210ENST00000525878 FAR2Q96K12 515 aa4.56□□□□□ -1.68
CSDE1-210ENST00000525878 SFXN1Q9H9B4 322 aa4.56□□□□□ -1.68
CSDE1-210ENST00000525878 PLSCR4Q9NRQ2 329 aa4.56□□□□□ -1.68
CSDE1-210ENST00000525878 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.56□□□□□ -1.68
CSDE1-210ENST00000525878 RGL1Q9NZL6 768 aa4.56□□□□□ -1.68
CSDE1-210ENST00000525878 CKAP5Q14008 2032 aa4.55□□□□□ -1.68
CSDE1-210ENST00000525878 LOC105369274A0A096LPK9 316 aa4.55□□□□□ -1.68
CSDE1-210ENST00000525878 LOC102723532A0A0G2JNH3 316 aa4.55□□□□□ -1.68
CSDE1-210ENST00000525878 KCNJ18B7U540 433 aa4.55□□□□□ -1.68
CSDE1-210ENST00000525878 KPNA5O15131 536 aa4.55□□□□□ -1.68
CSDE1-210ENST00000525878 NKX2-8O15522 239 aa4.55□□□□□ -1.68
CSDE1-210ENST00000525878 CYP1A2P05177 515 aa4.55□□□□□ -1.68
CSDE1-210ENST00000525878 SELENOVP59797 346 aa4.55□□□□□ -1.68
CSDE1-210ENST00000525878 ENTPD8Q5MY95 495 aa4.55□□□□□ -1.68
CSDE1-210ENST00000525878 OR4N4Q8N0Y3 316 aa4.55□□□□□ -1.68
CSDE1-210ENST00000525878 KDM1BQ8NB78 822 aa4.55□□□□□ -1.68
CSDE1-210ENST00000525878 WDR77Q9BQA1 342 aaPredicted RBP4.55□□□□□ -1.68
CSDE1-210ENST00000525878 EIF2AQ9BY44 585 aaKnown RBP4.55□□□□□ -1.68
CSDE1-210ENST00000525878 PLEKHB1Q9UF11 243 aaPredicted RBP4.55□□□□□ -1.68
CSDE1-210ENST00000525878 TCEAL9Q9UHQ7 104 aa4.55□□□□□ -1.68
CSDE1-210ENST00000525878 CA14Q9ULX7 337 aa4.55□□□□□ -1.68
CSDE1-210ENST00000525878 DTNAQ9Y4J8 743 aa4.55□□□□□ -1.68
CSDE1-210ENST00000525878 CXorf65A6NEN9 183 aa4.54□□□□□ -1.68
CSDE1-210ENST00000525878 PQBP1O60828 265 aaKnown RBP4.54□□□□□ -1.68
CSDE1-210ENST00000525878 ALDOCP09972 364 aaKnown RBP4.54□□□□□ -1.68
CSDE1-210ENST00000525878 SRGAP2BP0DMP2 458 aa4.54□□□□□ -1.68
CSDE1-210ENST00000525878 POLE2P56282 527 aa4.54□□□□□ -1.68
CSDE1-210ENST00000525878 PMPCAQ10713 525 aa4.54□□□□□ -1.68
CSDE1-210ENST00000525878 KIF5AQ12840 1032 aa4.54□□□□□ -1.68
CSDE1-210ENST00000525878 CSHL1Q14406 222 aa4.54□□□□□ -1.68
CSDE1-210ENST00000525878 AAK1Q2M2I8 961 aa4.54□□□□□ -1.68
CSDE1-210ENST00000525878 MDGA2Q7Z553 956 aa4.54□□□□□ -1.68
CSDE1-210ENST00000525878 C14orf80Q86SX3 495 aa4.54□□□□□ -1.68
CSDE1-210ENST00000525878 CCDC33Q8N5R6 958 aa4.54□□□□□ -1.68
CSDE1-210ENST00000525878 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.54□□□□□ -1.68
CSDE1-210ENST00000525878 CDT1Q9H211 546 aa4.54□□□□□ -1.68
CSDE1-210ENST00000525878 PNRC2Q9NPJ4 139 aaKnown RBP4.54□□□□□ -1.68
CSDE1-210ENST00000525878 RNF146Q9NTX7 359 aa4.54□□□□□ -1.68
CSDE1-210ENST00000525878 MAN2B2Q9Y2E5 1009 aa4.54□□□□□ -1.68
CSDE1-210ENST00000525878 DTX4Q9Y2E6 619 aa4.54□□□□□ -1.68
CSDE1-210ENST00000525878 PCDHGB1Q9Y5G3 927 aa4.54□□□□□ -1.68
CSDE1-210ENST00000525878 BTBD18B2RXH4 712 aa4.53□□□□□ -1.68
CSDE1-210ENST00000525878 I6L893 689 aaPredicted RBP4.53□□□□□ -1.68
CSDE1-210ENST00000525878 J3KTA2 159 aa4.53□□□□□ -1.68
CSDE1-210ENST00000525878 APOL1O14791 398 aa4.53□□□□□ -1.68
CSDE1-210ENST00000525878 ZNF432O94892 652 aa4.53□□□□□ -1.68
CSDE1-210ENST00000525878 GLUD1P00367 558 aa4.53□□□□□ -1.68
CSDE1-210ENST00000525878 PLGP00747 810 aaPredicted RBP4.53□□□□□ -1.68
CSDE1-210ENST00000525878 STT3AP46977 705 aa4.53□□□□□ -1.68
CSDE1-210ENST00000525878 GLUD2P49448 558 aa4.53□□□□□ -1.68
CSDE1-210ENST00000525878 COMPP49747 757 aaPredicted RBP4.53□□□□□ -1.68
CSDE1-210ENST00000525878 PDLIM4P50479 330 aa4.53□□□□□ -1.68
CSDE1-210ENST00000525878 FOXL2P58012 376 aa4.53□□□□□ -1.68
CSDE1-210ENST00000525878 KRTAP10-5P60370 271 aa4.53□□□□□ -1.68
CSDE1-210ENST00000525878 ERVFC1-1P60608 527 aa4.53□□□□□ -1.68
CSDE1-210ENST00000525878 TLE3Q04726 772 aa4.53□□□□□ -1.68
CSDE1-210ENST00000525878 GPR18Q14330 331 aa4.53□□□□□ -1.68
CSDE1-210ENST00000525878 DUSP6Q16828 381 aa4.53□□□□□ -1.68
CSDE1-210ENST00000525878 PRAMEF19Q5SWL8 479 aa4.53□□□□□ -1.68
CSDE1-210ENST00000525878 C10orf76Q5T2E6 689 aa4.53□□□□□ -1.68
CSDE1-210ENST00000525878 DCAF12L2Q5VW00 463 aa4.53□□□□□ -1.68
CSDE1-210ENST00000525878 C9orf57Q5W0N0 161 aa4.53□□□□□ -1.68
CSDE1-210ENST00000525878 TMPRSS12Q86WS5 348 aa4.53□□□□□ -1.68
CSDE1-210ENST00000525878 RASGRP3Q8IV61 690 aa4.53□□□□□ -1.68
CSDE1-210ENST00000525878 CADM3Q8N126 398 aa4.53□□□□□ -1.68
CSDE1-210ENST00000525878 ADAMTS14Q8WXS8 1223 aa4.53□□□□□ -1.68
CSDE1-210ENST00000525878 TSR2Q969E8 191 aaKnown RBP4.53□□□□□ -1.68
CSDE1-210ENST00000525878 TTC17Q96AE7 1141 aa4.53□□□□□ -1.68
CSDE1-210ENST00000525878 TIFAQ96CG3 184 aa4.53□□□□□ -1.68
CSDE1-210ENST00000525878 KCNG2Q9UJ96 466 aa4.53□□□□□ -1.68
CSDE1-210ENST00000525878 FZD10Q9ULW2 581 aa4.53□□□□□ -1.68
CSDE1-210ENST00000525878 ICAM5Q9UMF0 924 aa4.53□□□□□ -1.68
CSDE1-210ENST00000525878 TNFSF13BQ9Y275 285 aa4.53□□□□□ -1.68
CSDE1-210ENST00000525878 CYP3A7-CYP3A51PA0A087WV96 503 aa4.52□□□□□ -1.69
CSDE1-210ENST00000525878 PNMA6EA0A0J9YXQ4 647 aa4.52□□□□□ -1.69
CSDE1-210ENST00000525878 SMTNL1A8MU46 457 aa4.52□□□□□ -1.69
CSDE1-210ENST00000525878 CAMTA2O94983 1202 aa4.52□□□□□ -1.69
CSDE1-210ENST00000525878 CYP3A4P08684 503 aa4.52□□□□□ -1.69
CSDE1-210ENST00000525878 SLC5A1P13866 664 aa4.52□□□□□ -1.69
CSDE1-210ENST00000525878 CYP3A7P24462 503 aa4.52□□□□□ -1.69
CSDE1-210ENST00000525878 PRIM2P49643 509 aa4.52□□□□□ -1.69
CSDE1-210ENST00000525878 ZP1P60852 638 aa4.52□□□□□ -1.69
CSDE1-210ENST00000525878 GALNT3Q14435 633 aa4.52□□□□□ -1.69
CSDE1-210ENST00000525878 IZUMO4Q1ZYL8 232 aa4.52□□□□□ -1.69
CSDE1-210ENST00000525878 DNTTIP2Q5QJE6 756 aaKnown RBP4.52□□□□□ -1.69
CSDE1-210ENST00000525878 FNBP1LQ5T0N5 605 aa4.52□□□□□ -1.69
CSDE1-210ENST00000525878 OTUD1Q5VV17 481 aaPredicted RBP4.52□□□□□ -1.69
CSDE1-210ENST00000525878 TMEM88Q6PEY1 159 aa4.52□□□□□ -1.69
CSDE1-210ENST00000525878 C16orf82Q7Z2V1 217 aa4.52□□□□□ -1.69
CSDE1-210ENST00000525878 ARMC9Q7Z3E5 817 aa4.52□□□□□ -1.69
CSDE1-210ENST00000525878 SLC25A41Q8N5S1 370 aa4.52□□□□□ -1.69
CSDE1-210ENST00000525878 IP6K1Q92551 441 aa4.52□□□□□ -1.69
CSDE1-210ENST00000525878 MCRS1Q96EZ8 462 aa4.52□□□□□ -1.69
CSDE1-210ENST00000525878 HELLSQ9NRZ9 838 aa4.52□□□□□ -1.69
CSDE1-210ENST00000525878 FAM234BA2RU67 622 aa4.51□□□□□ -1.69
CSDE1-210ENST00000525878 C3orf70A6NLC5 250 aaPredicted RBP4.51□□□□□ -1.69
CSDE1-210ENST00000525878 SRRM3A6NNA2 597 aaPredicted RBP4.51□□□□□ -1.69
CSDE1-210ENST00000525878 M0QYT0 321 aa4.51□□□□□ -1.69
CSDE1-210ENST00000525878 MSI1O43347 362 aaKnown RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms