RNA–Protein interactions for RNA: ENST00000524115.2

NKX6-3-202, Transcript of NK6 homeobox 3, humanhuman

TSL 2 BASIC

Gene NKX6-3, Length 1,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-202ENST00000524115 GARSP41250 739 aaKnown RBP23.07■■□□□ 1.28
NKX6-3-202ENST00000524115 TMPRSS15P98073 1019 aa23.07■■□□□ 1.28
NKX6-3-202ENST00000524115 DEUP1Q05D60 604 aa23.07■■□□□ 1.28
NKX6-3-202ENST00000524115 FRG1Q14331 258 aaKnown RBP23.07■■□□□ 1.28
NKX6-3-202ENST00000524115 GRIN2CQ14957 1233 aa23.07■■□□□ 1.28
NKX6-3-202ENST00000524115 CTC1Q2NKJ3 1217 aa23.07■■□□□ 1.28
NKX6-3-202ENST00000524115 PLEKHG4Q58EX7 1191 aa23.07■■□□□ 1.28
NKX6-3-202ENST00000524115 DCAF6Q58WW2 860 aa23.07■■□□□ 1.28
NKX6-3-202ENST00000524115 SYCP2LQ5T4T6 812 aa23.07■■□□□ 1.28
NKX6-3-202ENST00000524115 TAF2Q6P1X5 1199 aa23.07■■□□□ 1.28
NKX6-3-202ENST00000524115 CNKSR3Q6P9H4 555 aa23.07■■□□□ 1.28
NKX6-3-202ENST00000524115 CRLF3Q8IUI8 442 aa23.07■■□□□ 1.28
NKX6-3-202ENST00000524115 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.07■■□□□ 1.28
NKX6-3-202ENST00000524115 PHOSPHO2Q8TCD6 241 aa23.07■■□□□ 1.28
NKX6-3-202ENST00000524115 UTP4Q969X6 686 aaKnown RBP23.07■■□□□ 1.28
NKX6-3-202ENST00000524115 BTBD10Q9BSF8 475 aa23.07■■□□□ 1.28
NKX6-3-202ENST00000524115 SMYD2Q9NRG4 433 aa23.07■■□□□ 1.28
NKX6-3-202ENST00000524115 KANSL3Q9P2N6 904 aa23.07■■□□□ 1.28
NKX6-3-202ENST00000524115 COL6A3P12111 3177 aa23.07■■□□□ 1.28
NKX6-3-202ENST00000524115 AP3B1O00203 1094 aa23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 GLRA3O75311 464 aa23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 F9P00740 461 aa23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 FAM200BP0CF97 657 aa23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 SCAPQ12770 1279 aa23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 OVGP1Q12889 678 aa23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 IFRD2Q12894 506 aaPredicted RBP23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 INSCQ1MX18 579 aa23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 TCTN1Q2MV58 587 aa23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 DENND5BQ6ZUT9 1274 aa23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 FAM131BQ86XD5 332 aa23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 NDUFAF2Q8N183 169 aa23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 NKX2-4Q9H2Z4 354 aa23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 MMADHCQ9H3L0 296 aaPredicted RBP23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 KCNK13Q9HB14 408 aa23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 KLK14Q9P0G3 267 aa23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 DCDC2Q9UHG0 476 aa23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 ERI2A8K979 691 aaKnown RBP23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 RNF103O00237 685 aa23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 EEF2KO00418 725 aaKnown RBP23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 RPLP2P05387 115 aaKnown RBP23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 BPGMP07738 259 aa23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 MYOGP15173 224 aa23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 VAV1P15498 845 aa23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 ATXN1P54253 815 aaKnown RBP23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 ARL13BQ3SXY8 428 aa23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 SPANXN3Q5MJ09 141 aa23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 MYLIPQ8WY64 445 aa23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 P2RY11Q96G91 374 aa23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 OXNAD1Q96HP4 312 aaPredicted RBP23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 LPIN3Q9BQK8 851 aa23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 MED10Q9BTT4 135 aa23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 STN1Q9H668 368 aaKnown RBP23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 RNPEPL1Q9HAU8 725 aa23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 ALG13Q9NP73 1137 aaKnown RBP23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 CNGB3Q9NQW8 809 aa23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 SORCS3Q9UPU3 1222 aa23.06■■□□□ 1.28
NKX6-3-202ENST00000524115 M0QYT0 321 aa23.05■■□□□ 1.28
NKX6-3-202ENST00000524115 M0QZ92 97 aa23.05■■□□□ 1.28
NKX6-3-202ENST00000524115 MAP3K6O95382 1288 aa23.05■■□□□ 1.28
NKX6-3-202ENST00000524115 CTSHP09668 335 aa23.05■■□□□ 1.28
NKX6-3-202ENST00000524115 PAX3P23760 479 aa23.05■■□□□ 1.28
NKX6-3-202ENST00000524115 TKTP29401 623 aaKnown RBP23.05■■□□□ 1.28
NKX6-3-202ENST00000524115 OSTM1Q86WC4 334 aa23.05■■□□□ 1.28
NKX6-3-202ENST00000524115 SMG8Q8ND04 991 aaKnown RBP23.05■■□□□ 1.28
NKX6-3-202ENST00000524115 STKLD1Q8NE28 680 aa23.05■■□□□ 1.28
NKX6-3-202ENST00000524115 PTCD3Q96EY7 689 aaKnown RBP23.05■■□□□ 1.28
NKX6-3-202ENST00000524115 PGAP3Q96FM1 320 aaPredicted RBP23.05■■□□□ 1.28
NKX6-3-202ENST00000524115 PPP1R10Q96QC0 940 aaKnown RBP23.05■■□□□ 1.28
NKX6-3-202ENST00000524115 ADAM28Q9UKQ2 775 aa23.05■■□□□ 1.28
NKX6-3-202ENST00000524115 CDH23Q9H251 3354 aa23.05■■□□□ 1.28
NKX6-3-202ENST00000524115 TRIP11Q15643 1979 aa23.04■■□□□ 1.28
NKX6-3-202ENST00000524115 ABHD14A-ACY1A0A1B0GW23 586 aa23.04■■□□□ 1.28
NKX6-3-202ENST00000524115 MFSD11O43934 449 aa23.04■■□□□ 1.28
NKX6-3-202ENST00000524115 CBX6O95503 412 aa23.04■■□□□ 1.28
NKX6-3-202ENST00000524115 POLBP06746 335 aa23.04■■□□□ 1.28
NKX6-3-202ENST00000524115 MX2P20592 715 aa23.04■■□□□ 1.28
NKX6-3-202ENST00000524115 OCRLQ01968 901 aa23.04■■□□□ 1.28
NKX6-3-202ENST00000524115 NIPAL4Q0D2K0 466 aa23.04■■□□□ 1.28
NKX6-3-202ENST00000524115 AP1B1Q10567 949 aa23.04■■□□□ 1.28
NKX6-3-202ENST00000524115 DPYSQ14117 519 aa23.04■■□□□ 1.28
NKX6-3-202ENST00000524115 RFX8Q6ZV50 586 aa23.04■■□□□ 1.28
NKX6-3-202ENST00000524115 ENDOVQ8N8Q3 282 aaKnown RBP23.04■■□□□ 1.28
NKX6-3-202ENST00000524115 FAM13CQ8NE31 585 aa23.04■■□□□ 1.28
NKX6-3-202ENST00000524115 ARMC2Q8NEN0 867 aa23.04■■□□□ 1.28
NKX6-3-202ENST00000524115 TRIM62Q9BVG3 475 aa23.04■■□□□ 1.28
NKX6-3-202ENST00000524115 C12orf65Q9H3J6 166 aaKnown RBP23.04■■□□□ 1.28
NKX6-3-202ENST00000524115 SLC28A3Q9HAS3 691 aa23.04■■□□□ 1.28
NKX6-3-202ENST00000524115 THAP1Q9NVV9 213 aa23.04■■□□□ 1.28
NKX6-3-202ENST00000524115 CAPN9O14815 690 aa23.03■■□□□ 1.28
NKX6-3-202ENST00000524115 WDR5P61964 334 aaKnown RBP23.03■■□□□ 1.28
NKX6-3-202ENST00000524115 SOX4Q06945 474 aaPredicted RBP23.03■■□□□ 1.28
NKX6-3-202ENST00000524115 WASHC5Q12768 1159 aa23.03■■□□□ 1.28
NKX6-3-202ENST00000524115 STX3Q13277 289 aa23.03■■□□□ 1.28
NKX6-3-202ENST00000524115 IKBKEQ14164 716 aa23.03■■□□□ 1.28
NKX6-3-202ENST00000524115 TWF2Q6IBS0 349 aaKnown RBP23.03■■□□□ 1.28
NKX6-3-202ENST00000524115 CASC4Q6P4E1 433 aa23.03■■□□□ 1.28
NKX6-3-202ENST00000524115 TLDC1Q6P9B6 456 aa23.03■■□□□ 1.28
NKX6-3-202ENST00000524115 CDHR3Q6ZTQ4 885 aa23.03■■□□□ 1.28
NKX6-3-202ENST00000524115 CLEC20AQ6ZU45 233 aa23.03■■□□□ 1.28
NKX6-3-202ENST00000524115 HERC6Q8IVU3 1022 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms