RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 PRELID1Q9Y255 219 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 ANKRD36A6QL64 1941 aa8.58□□□□□ -1.04
CSMD1-213ENST00000523488 CFAP99D6REC4 459 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 PSMD12O00232 456 aaPredicted RBP8.57□□□□□ -1.04
CSMD1-213ENST00000523488 KPNA4O00629 521 aaPredicted RBP8.57□□□□□ -1.04
CSMD1-213ENST00000523488 H2AFYO75367 372 aaKnown RBP8.57□□□□□ -1.04
CSMD1-213ENST00000523488 JUNP05412 331 aaKnown RBP8.57□□□□□ -1.04
CSMD1-213ENST00000523488 CD58P19256 250 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 MFAP3P55082 362 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 PRAMEP78395 509 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 RHDQ02161 417 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 TAP1Q03518 808 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 SEMA5AQ13591 1074 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 FLOT2Q14254 428 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 C6orf10Q5SRN2 563 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 XKR5Q6UX68 686 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 SLC16A12Q6ZSM3 486 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 IGFN1Q86VF2 1251 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 PEX5LQ8IYB4 626 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 PDIK1LQ8N165 341 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 TMEM151AQ8N4L1 468 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 OR7G1Q8NGA0 311 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 LILRB4Q8NHJ6 448 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.57□□□□□ -1.04
CSMD1-213ENST00000523488 HPS1Q92902 700 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 SPATA17Q96L03 361 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 SENP7Q9BQF6 1050 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 TMEM206Q9H813 350 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 XAB2Q9HCS7 855 aaKnown RBP8.57□□□□□ -1.04
CSMD1-213ENST00000523488 ABCD2Q9UBJ2 740 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 SRRDQ9UH36 339 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 DAPK2Q9UIK4 370 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 TRAF6Q9Y4K3 522 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 RLFQ13129 1914 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 RNASEH2AO75792 299 aaKnown RBP8.57□□□□□ -1.04
CSMD1-213ENST00000523488 KRT5P13647 590 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 SLC7A1P30825 629 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 STAT3P40763 770 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 SLC10A2Q12908 348 aaPredicted RBP8.57□□□□□ -1.04
CSMD1-213ENST00000523488 CEACAM7Q14002 265 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 ATP6AP1Q15904 470 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 TFDP3Q5H9I0 405 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 C16orf89Q6UX73 402 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 C4orf22Q6V702 233 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 KIAA2013Q8IYS2 634 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 NTPCRQ9BSD7 190 aaKnown RBP8.57□□□□□ -1.04
CSMD1-213ENST00000523488 MECRQ9BV79 373 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 PARVGQ9HBI0 331 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 RAB20Q9NX57 234 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 ZBTB21Q9ULJ3 1066 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 C1orf232A0A0U1RR37 186 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 UGT1A9O60656 530 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 ETS1P14921 441 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 UGT1A6P19224 532 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 UGT1A1P22309 533 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 UGT1A4P22310 534 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 IDUAP35475 653 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 UGT1A3P35503 534 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 UGT1A5P35504 534 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 ETV6P41212 452 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 SERPINB9P50453 376 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 HLCSP50747 726 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 TSPY1Q01534 308 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 GPATCH4Q5T3I0 446 aaKnown RBP8.57□□□□□ -1.04
CSMD1-213ENST00000523488 TTC30AQ86WT1 665 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 ADGRF4Q8IZF3 695 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 FBXO36Q8NEA4 188 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 FAF2Q96CS3 445 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 SH3GL1Q99961 368 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 TMEM79Q9BSE2 394 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 BCAS3Q9H6U6 928 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 UGT1A7Q9HAW7 530 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 UGT1A10Q9HAW8 530 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 UGT1A8Q9HAW9 530 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 AP4S1Q9Y587 144 aa8.57□□□□□ -1.04
CSMD1-213ENST00000523488 TTC24A2A3L6 582 aaPredicted RBP8.56□□□□□ -1.04
CSMD1-213ENST00000523488 USP17L5A8MUK1 530 aa8.56□□□□□ -1.04
CSMD1-213ENST00000523488 PI4K2BG5E9Z4 385 aa8.56□□□□□ -1.04
CSMD1-213ENST00000523488 J3QRK9 145 aa8.56□□□□□ -1.04
CSMD1-213ENST00000523488 M0QX08 132 aa8.56□□□□□ -1.04
CSMD1-213ENST00000523488 NUAK1O60285 661 aa8.56□□□□□ -1.04
CSMD1-213ENST00000523488 KRT37O76014 449 aa8.56□□□□□ -1.04
CSMD1-213ENST00000523488 TOMM70O94826 608 aa8.56□□□□□ -1.04
CSMD1-213ENST00000523488 FARP2O94887 1054 aaPredicted RBP8.56□□□□□ -1.04
CSMD1-213ENST00000523488 LSM8O95777 96 aaKnown RBP8.56□□□□□ -1.04
CSMD1-213ENST00000523488 SNRPAP09012 282 aaKnown RBP8.56□□□□□ -1.04
CSMD1-213ENST00000523488 MX2P20592 715 aa8.56□□□□□ -1.04
CSMD1-213ENST00000523488 MMP8P22894 467 aa8.56□□□□□ -1.04
CSMD1-213ENST00000523488 JAK1P23458 1154 aa8.56□□□□□ -1.04
CSMD1-213ENST00000523488 TM4SF1P30408 202 aa8.56□□□□□ -1.04
CSMD1-213ENST00000523488 GABARAPL2P60520 117 aa8.56□□□□□ -1.04
CSMD1-213ENST00000523488 MS4A2Q01362 244 aa8.56□□□□□ -1.04
CSMD1-213ENST00000523488 KLF10Q13118 480 aa8.56□□□□□ -1.04
CSMD1-213ENST00000523488 NRF1Q16656 503 aa8.56□□□□□ -1.04
CSMD1-213ENST00000523488 SIGIRRQ6IA17 410 aa8.56□□□□□ -1.04
CSMD1-213ENST00000523488 VASH1Q7L8A9 365 aaPredicted RBP8.56□□□□□ -1.04
CSMD1-213ENST00000523488 THNSL1Q8IYQ7 743 aa8.56□□□□□ -1.04
CSMD1-213ENST00000523488 ZNF566Q969W8 418 aa8.56□□□□□ -1.04
CSMD1-213ENST00000523488 FBXL8Q96CD0 374 aa8.56□□□□□ -1.04
CSMD1-213ENST00000523488 CEP44Q9C0F1 390 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms