RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 FBXL22Q6P050 247 aa16.75■□□□□ 0.27
CLN8-206ENST00000523237 SND1Q7KZF4 910 aaKnown RBP eCLIP16.75■□□□□ 0.27
CLN8-206ENST00000523237 FAM124AQ86V42 546 aa16.75■□□□□ 0.27
CLN8-206ENST00000523237 CIR1Q86X95 450 aaPredicted RBP16.75■□□□□ 0.27
CLN8-206ENST00000523237 ZNF677Q86XU0 584 aa16.75■□□□□ 0.27
CLN8-206ENST00000523237 CCAR2Q8N163 923 aaKnown RBP16.75■□□□□ 0.27
CLN8-206ENST00000523237 DNASE2BQ8WZ79 361 aa16.75■□□□□ 0.27
CLN8-206ENST00000523237 MRGPRX3Q96LB0 322 aa16.75■□□□□ 0.27
CLN8-206ENST00000523237 RPRD1AQ96P16 312 aaPredicted RBP16.75■□□□□ 0.27
CLN8-206ENST00000523237 NPY6RQ99463 290 aa16.75■□□□□ 0.27
CLN8-206ENST00000523237 GTPBP2Q9BX10 602 aaKnown RBP16.75■□□□□ 0.27
CLN8-206ENST00000523237 PCED1AQ9H1Q7 454 aa16.75■□□□□ 0.27
CLN8-206ENST00000523237 FSCN3Q9NQT6 498 aa16.75■□□□□ 0.27
CLN8-206ENST00000523237 PIGVQ9NUD9 493 aa16.75■□□□□ 0.27
CLN8-206ENST00000523237 TMEM51Q9NW97 253 aa16.75■□□□□ 0.27
CLN8-206ENST00000523237 PAXBP1Q9Y5B6 917 aa16.75■□□□□ 0.27
CLN8-206ENST00000523237 CNOT1A5YKK6 2376 aaKnown RBP16.74■□□□□ 0.27
CLN8-206ENST00000523237 ARHGAP33O14559 1287 aa16.74■□□□□ 0.27
CLN8-206ENST00000523237 RNASEH1O60930 286 aaKnown RBP16.74■□□□□ 0.27
CLN8-206ENST00000523237 GFPT2O94808 682 aa16.74■□□□□ 0.27
CLN8-206ENST00000523237 F9P00740 461 aa16.74■□□□□ 0.27
CLN8-206ENST00000523237 CSRP1P21291 193 aaKnown RBP16.74■□□□□ 0.27
CLN8-206ENST00000523237 KLK7P49862 253 aa16.74■□□□□ 0.27
CLN8-206ENST00000523237 SULT1E1P49888 294 aa16.74■□□□□ 0.27
CLN8-206ENST00000523237 COPB1P53618 953 aaKnown RBP16.74■□□□□ 0.27
CLN8-206ENST00000523237 AUHQ13825 339 aaKnown RBP16.74■□□□□ 0.27
CLN8-206ENST00000523237 BRMS1LQ5PSV4 323 aa16.74■□□□□ 0.27
CLN8-206ENST00000523237 N4BP2L1Q5TBK1 243 aaPredicted RBP16.74■□□□□ 0.27
CLN8-206ENST00000523237 SH3PXD2AQ5TCZ1 1133 aa16.74■□□□□ 0.27
CLN8-206ENST00000523237 DCAF12L1Q5VU92 463 aa16.74■□□□□ 0.27
CLN8-206ENST00000523237 XYLT1Q86Y38 959 aa16.74■□□□□ 0.27
CLN8-206ENST00000523237 APCDD1Q8J025 514 aa16.74■□□□□ 0.27
CLN8-206ENST00000523237 NT5C3BQ969T7 300 aa16.74■□□□□ 0.27
CLN8-206ENST00000523237 PGAP3Q96FM1 320 aaPredicted RBP16.74■□□□□ 0.27
CLN8-206ENST00000523237 SPAG5Q96R06 1193 aa16.74■□□□□ 0.27
CLN8-206ENST00000523237 PPP1R9BQ96SB3 815 aa16.74■□□□□ 0.27
CLN8-206ENST00000523237 RSPH9Q9H1X1 276 aaPredicted RBP16.74■□□□□ 0.27
CLN8-206ENST00000523237 WDCPQ9H6R7 721 aa16.74■□□□□ 0.27
CLN8-206ENST00000523237 LIMA1Q9UHB6 759 aaKnown RBP16.74■□□□□ 0.27
CLN8-206ENST00000523237 SCML1Q9UN30 329 aa16.74■□□□□ 0.27
CLN8-206ENST00000523237 HS3ST4Q9Y661 456 aa16.74■□□□□ 0.27
CLN8-206ENST00000523237 ITIH6Q6UXX5 1313 aa16.73■□□□□ 0.27
CLN8-206ENST00000523237 ASCC3Q8N3C0 2202 aaKnown RBP16.73■□□□□ 0.27
CLN8-206ENST00000523237 A0A1B0GTW7 788 aa16.73■□□□□ 0.27
CLN8-206ENST00000523237 TARSL2A2RTX5 802 aaKnown RBP16.73■□□□□ 0.27
CLN8-206ENST00000523237 SIN3BO75182 1162 aa16.73■□□□□ 0.27
CLN8-206ENST00000523237 PAGE1O75459 146 aa16.73■□□□□ 0.27
CLN8-206ENST00000523237 PDGFRAP16234 1089 aa16.73■□□□□ 0.27
CLN8-206ENST00000523237 ACSL1P33121 698 aa16.73■□□□□ 0.27
CLN8-206ENST00000523237 SOX5P35711 763 aa16.73■□□□□ 0.27
CLN8-206ENST00000523237 NNMTP40261 264 aa16.73■□□□□ 0.27
CLN8-206ENST00000523237 CTSOP43234 321 aaPredicted RBP16.73■□□□□ 0.27
CLN8-206ENST00000523237 CXCR3P49682 368 aa16.73■□□□□ 0.27
CLN8-206ENST00000523237 PLK1P53350 603 aa16.73■□□□□ 0.27
CLN8-206ENST00000523237 NOMO3P69849 1222 aa16.73■□□□□ 0.27
CLN8-206ENST00000523237 CENPCQ03188 943 aa16.73■□□□□ 0.27
CLN8-206ENST00000523237 DEUP1Q05D60 604 aa16.73■□□□□ 0.27
CLN8-206ENST00000523237 SULT2A1Q06520 285 aa16.73■□□□□ 0.27
CLN8-206ENST00000523237 SLC25A52Q3SY17 297 aa16.73■□□□□ 0.27
CLN8-206ENST00000523237 OTUD1Q5VV17 481 aaPredicted RBP16.73■□□□□ 0.27
CLN8-206ENST00000523237 NAA35Q5VZE5 725 aa16.73■□□□□ 0.27
CLN8-206ENST00000523237 DHX40Q8IX18 779 aaKnown RBP16.73■□□□□ 0.27
CLN8-206ENST00000523237 HDDC3Q8N4P3 179 aa16.73■□□□□ 0.27
CLN8-206ENST00000523237 MINDY1Q8N5J2 469 aa16.73■□□□□ 0.27
CLN8-206ENST00000523237 CPA5Q8WXQ8 436 aa16.73■□□□□ 0.27
CLN8-206ENST00000523237 IGSF8Q969P0 613 aa16.73■□□□□ 0.27
CLN8-206ENST00000523237 PCMTD1Q96MG8 357 aaPredicted RBP16.73■□□□□ 0.27
CLN8-206ENST00000523237 BTBD1Q9H0C5 482 aa16.73■□□□□ 0.27
CLN8-206ENST00000523237 SIK2Q9H0K1 926 aa16.73■□□□□ 0.27
CLN8-206ENST00000523237 MIR1-1HGQ9H1L0 117 aa16.73■□□□□ 0.27
CLN8-206ENST00000523237 MTG2Q9H4K7 406 aa16.73■□□□□ 0.27
CLN8-206ENST00000523237 NLRC4Q9NPP4 1024 aa16.73■□□□□ 0.27
CLN8-206ENST00000523237 ARHGEF38Q9NXL2 777 aa16.73■□□□□ 0.27
CLN8-206ENST00000523237 NOCTQ9UK39 431 aaKnown RBP16.73■□□□□ 0.27
CLN8-206ENST00000523237 VANGL2Q9ULK5 521 aa16.73■□□□□ 0.27
CLN8-206ENST00000523237 NCKAP1Q9Y2A7 1128 aa16.73■□□□□ 0.27
CLN8-206ENST00000523237 SIK3Q9Y2K2 1263 aa16.73■□□□□ 0.27
CLN8-206ENST00000523237 NUMA1Q14980 2115 aa16.72■□□□□ 0.27
CLN8-206ENST00000523237 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.72■□□□□ 0.27
CLN8-206ENST00000523237 EDDM13A0A1B0GTR0 161 aa16.72■□□□□ 0.27
CLN8-206ENST00000523237 FAM170AA1A519 330 aa16.72■□□□□ 0.27
CLN8-206ENST00000523237 LGALS16A8MUM7 142 aa16.72■□□□□ 0.27
CLN8-206ENST00000523237 TTC34A8MYJ7 566 aa16.72■□□□□ 0.27
CLN8-206ENST00000523237 GOLGA8SH3BPF8 625 aa16.72■□□□□ 0.27
CLN8-206ENST00000523237 EPHB6O15197 1021 aa16.72■□□□□ 0.27
CLN8-206ENST00000523237 OPHN1O60890 802 aa16.72■□□□□ 0.27
CLN8-206ENST00000523237 CEACAM1P13688 526 aa16.72■□□□□ 0.27
CLN8-206ENST00000523237 TFE3P19532 575 aaPredicted RBP16.72■□□□□ 0.27
CLN8-206ENST00000523237 CDK11BP21127 795 aaKnown RBP16.72■□□□□ 0.27
CLN8-206ENST00000523237 MZF1P28698 734 aaPredicted RBP16.72■□□□□ 0.27
CLN8-206ENST00000523237 STAT1P42224 750 aa16.72■□□□□ 0.27
CLN8-206ENST00000523237 JAM2P57087 298 aa16.72■□□□□ 0.27
CLN8-206ENST00000523237 CDR2Q01850 454 aa16.72■□□□□ 0.27
CLN8-206ENST00000523237 SFSWAPQ12872 951 aaKnown RBP16.72■□□□□ 0.27
CLN8-206ENST00000523237 ZNF177Q13360 481 aaPredicted RBP16.72■□□□□ 0.27
CLN8-206ENST00000523237 SYCP1Q15431 976 aa16.72■□□□□ 0.27
CLN8-206ENST00000523237 C2CD6Q53TS8 623 aa16.72■□□□□ 0.27
CLN8-206ENST00000523237 C9orf64Q5T6V5 341 aa16.72■□□□□ 0.27
CLN8-206ENST00000523237 ACBD5Q5T8D3 534 aaPredicted RBP16.72■□□□□ 0.27
CLN8-206ENST00000523237 CXorf57Q6NSI4 855 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms