RNA–Protein interactions for RNA: ENST00000521425.5

TRAM1-205, Transcript of translocation associated membrane protein 1, humanhuman

TSL 2 BASIC

Gene TRAM1, Length 3,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-205ENST00000521425 TNFAIP8L3Q5GJ75 292 aa17.9■□□□□ 0.46
TRAM1-205ENST00000521425 LGSNQ5TDP6 509 aa17.9■□□□□ 0.46
TRAM1-205ENST00000521425 TTC39BQ5VTQ0 682 aaPredicted RBP17.9■□□□□ 0.46
TRAM1-205ENST00000521425 PPP1R2P3Q6NXS1 205 aa17.9■□□□□ 0.46
TRAM1-205ENST00000521425 USP50Q70EL3 339 aaPredicted RBP17.9■□□□□ 0.46
TRAM1-205ENST00000521425 RPS27LQ71UM5 84 aaKnown RBP17.9■□□□□ 0.46
TRAM1-205ENST00000521425 CDKL3Q8IVW4 592 aaPredicted RBP17.9■□□□□ 0.46
TRAM1-205ENST00000521425 FAM13CQ8NE31 585 aa17.9■□□□□ 0.46
TRAM1-205ENST00000521425 PPP4R1Q8TF05 950 aa17.9■□□□□ 0.46
TRAM1-205ENST00000521425 PARK7Q99497 189 aaKnown RBP17.9■□□□□ 0.46
TRAM1-205ENST00000521425 KRT36O76013 467 aa17.89■□□□□ 0.45
TRAM1-205ENST00000521425 STK10O94804 968 aaKnown RBP17.89■□□□□ 0.45
TRAM1-205ENST00000521425 PIRTP0C851 137 aa17.89■□□□□ 0.45
TRAM1-205ENST00000521425 TSPAN8P19075 237 aa17.89■□□□□ 0.45
TRAM1-205ENST00000521425 GRIK1P39086 918 aa17.89■□□□□ 0.45
TRAM1-205ENST00000521425 RASSF2P50749 326 aa17.89■□□□□ 0.45
TRAM1-205ENST00000521425 PLK1P53350 603 aa17.89■□□□□ 0.45
TRAM1-205ENST00000521425 SLC45A4Q5BKX6 768 aa17.89■□□□□ 0.45
TRAM1-205ENST00000521425 NCBP2-AS2Q69YL0 99 aa17.89■□□□□ 0.45
TRAM1-205ENST00000521425 ZNF280DQ6N043 979 aa17.89■□□□□ 0.45
TRAM1-205ENST00000521425 MCUQ8NE86 351 aa17.89■□□□□ 0.45
TRAM1-205ENST00000521425 DENND1AQ8TEH3 1009 aa17.89■□□□□ 0.45
TRAM1-205ENST00000521425 NAT14Q8WUY8 206 aa17.89■□□□□ 0.45
TRAM1-205ENST00000521425 ADAMTS10Q9H324 1103 aa17.89■□□□□ 0.45
TRAM1-205ENST00000521425 DNAJC16Q9Y2G8 782 aa17.89■□□□□ 0.45
TRAM1-205ENST00000521425 ZNF711Q9Y462 761 aa17.89■□□□□ 0.45
TRAM1-205ENST00000521425 E9PBE3 544 aa17.89■□□□□ 0.45
TRAM1-205ENST00000521425 KLHL41O60662 606 aa17.89■□□□□ 0.45
TRAM1-205ENST00000521425 PDE5AO76074 875 aa17.89■□□□□ 0.45
TRAM1-205ENST00000521425 ZWINTO95229 277 aa17.89■□□□□ 0.45
TRAM1-205ENST00000521425 CA8P35219 290 aa17.89■□□□□ 0.45
TRAM1-205ENST00000521425 KCNJ11Q14654 390 aa17.89■□□□□ 0.45
TRAM1-205ENST00000521425 KPNB1Q14974 876 aaKnown RBP17.89■□□□□ 0.45
TRAM1-205ENST00000521425 CLNKQ7Z7G1 428 aa17.89■□□□□ 0.45
TRAM1-205ENST00000521425 LDB1Q86U70 411 aaPredicted RBP17.89■□□□□ 0.45
TRAM1-205ENST00000521425 SLC44A1Q8WWI5 657 aa17.89■□□□□ 0.45
TRAM1-205ENST00000521425 UPF1Q92900 1129 aaKnown RBP eCLIP17.89■□□□□ 0.45
TRAM1-205ENST00000521425 UTP4Q969X6 686 aaKnown RBP17.89■□□□□ 0.45
TRAM1-205ENST00000521425 WDCPQ9H6R7 721 aa17.89■□□□□ 0.45
TRAM1-205ENST00000521425 PLEKHA5Q9HAU0 1116 aa17.89■□□□□ 0.45
TRAM1-205ENST00000521425 POPDC2Q9HBU9 364 aa17.89■□□□□ 0.45
TRAM1-205ENST00000521425 IARS2Q9NSE4 1012 aaKnown RBP17.89■□□□□ 0.45
TRAM1-205ENST00000521425 C20orf96Q9NUD7 363 aaPredicted RBP17.89■□□□□ 0.45
TRAM1-205ENST00000521425 PNPOQ9NVS9 261 aa17.89■□□□□ 0.45
TRAM1-205ENST00000521425 ZBTB24O43167 697 aaPredicted RBP17.88■□□□□ 0.45
TRAM1-205ENST00000521425 ALADP13716 330 aa17.88■□□□□ 0.45
TRAM1-205ENST00000521425 RASA2Q15283 850 aa17.88■□□□□ 0.45
TRAM1-205ENST00000521425 STK32AQ8WU08 396 aa17.88■□□□□ 0.45
TRAM1-205ENST00000521425 RAB3IPQ96QF0 476 aaPredicted RBP17.88■□□□□ 0.45
TRAM1-205ENST00000521425 AGO3Q9H9G7 860 aaKnown RBP17.88■□□□□ 0.45
TRAM1-205ENST00000521425 PRM3Q9NNZ6 103 aa17.88■□□□□ 0.45
TRAM1-205ENST00000521425 RBM47A0AV96 593 aaKnown RBP17.88■□□□□ 0.45
TRAM1-205ENST00000521425 DCTN3O75935 186 aa17.88■□□□□ 0.45
TRAM1-205ENST00000521425 GM2AP17900 193 aa17.88■□□□□ 0.45
TRAM1-205ENST00000521425 TCN1P20061 433 aaPredicted RBP17.88■□□□□ 0.45
TRAM1-205ENST00000521425 CTBP1Q13363 440 aa17.88■□□□□ 0.45
TRAM1-205ENST00000521425 FASTKD1Q53R41 847 aaKnown RBP17.88■□□□□ 0.45
TRAM1-205ENST00000521425 RBM12BQ8IXT5 1001 aaKnown RBP17.88■□□□□ 0.45
TRAM1-205ENST00000521425 ZNF567Q8N184 647 aa17.88■□□□□ 0.45
TRAM1-205ENST00000521425 ACVR1CQ8NER5 493 aa17.88■□□□□ 0.45
TRAM1-205ENST00000521425 FNIP1Q8TF40 1166 aa17.88■□□□□ 0.45
TRAM1-205ENST00000521425 ZFAND2BQ8WV99 257 aa17.88■□□□□ 0.45
TRAM1-205ENST00000521425 PABPC5Q96DU9 382 aaKnown RBP17.88■□□□□ 0.45
TRAM1-205ENST00000521425 SORBS2O94875 1100 aaKnown RBP17.88■□□□□ 0.45
TRAM1-205ENST00000521425 NPR3P17342 541 aa17.88■□□□□ 0.45
TRAM1-205ENST00000521425 STX3Q13277 289 aa17.88■□□□□ 0.45
TRAM1-205ENST00000521425 THOC5Q13769 683 aaKnown RBP17.88■□□□□ 0.45
TRAM1-205ENST00000521425 PDK2Q15119 407 aa17.88■□□□□ 0.45
TRAM1-205ENST00000521425 STRA8Q7Z7C7 330 aa17.88■□□□□ 0.45
TRAM1-205ENST00000521425 ATP2A3Q93084 1043 aa17.88■□□□□ 0.45
TRAM1-205ENST00000521425 APOPT1Q96IL0 206 aa17.88■□□□□ 0.45
TRAM1-205ENST00000521425 APBA2Q99767 749 aa17.88■□□□□ 0.45
TRAM1-205ENST00000521425 DENND2DQ9H6A0 471 aaPredicted RBP17.88■□□□□ 0.45
TRAM1-205ENST00000521425 ASB3Q9Y575 518 aa17.88■□□□□ 0.45
TRAM1-205ENST00000521425 STRNO43815 780 aa17.87■□□□□ 0.45
TRAM1-205ENST00000521425 THP07101 528 aa17.87■□□□□ 0.45
TRAM1-205ENST00000521425 TPBGLP0DKB5 382 aa17.87■□□□□ 0.45
TRAM1-205ENST00000521425 IRF9Q00978 393 aa17.87■□□□□ 0.45
TRAM1-205ENST00000521425 DCAF4L1Q3SXM0 396 aa17.87■□□□□ 0.45
TRAM1-205ENST00000521425 KHDC1Q4VXA5 237 aaKnown RBP17.87■□□□□ 0.45
TRAM1-205ENST00000521425 CLEC20AQ6ZU45 233 aa17.87■□□□□ 0.45
TRAM1-205ENST00000521425 SDCCAG8Q86SQ7 713 aaPredicted RBP17.87■□□□□ 0.45
TRAM1-205ENST00000521425 C10orf82Q8WW14 230 aa17.87■□□□□ 0.45
TRAM1-205ENST00000521425 ZNF560Q96MR9 790 aa17.87■□□□□ 0.45
TRAM1-205ENST00000521425 CYP4F12Q9HCS2 524 aa17.87■□□□□ 0.45
TRAM1-205ENST00000521425 OR12D3Q9UGF7 316 aa17.87■□□□□ 0.45
TRAM1-205ENST00000521425 NRCAMQ92823 1304 aa17.87■□□□□ 0.45
TRAM1-205ENST00000521425 ENDOD1O94919 500 aa17.87■□□□□ 0.45
TRAM1-205ENST00000521425 TBX18O95935 607 aa17.87■□□□□ 0.45
TRAM1-205ENST00000521425 ABHD2P08910 425 aa17.87■□□□□ 0.45
TRAM1-205ENST00000521425 CHRNA4P43681 627 aa17.87■□□□□ 0.45
TRAM1-205ENST00000521425 SLC25A3Q00325 362 aa17.87■□□□□ 0.45
TRAM1-205ENST00000521425 DDR2Q16832 855 aa17.87■□□□□ 0.45
TRAM1-205ENST00000521425 DRICH1Q6PGQ1 229 aaPredicted RBP17.87■□□□□ 0.45
TRAM1-205ENST00000521425 TMEM110Q86TL2 294 aa17.87■□□□□ 0.45
TRAM1-205ENST00000521425 CRLF3Q8IUI8 442 aa17.87■□□□□ 0.45
TRAM1-205ENST00000521425 GBP7Q8N8V2 638 aaPredicted RBP17.87■□□□□ 0.45
TRAM1-205ENST00000521425 HIC2Q96JB3 615 aa17.87■□□□□ 0.45
TRAM1-205ENST00000521425 VCX3BQ9H321 246 aa17.87■□□□□ 0.45
TRAM1-205ENST00000521425 VCX3AQ9NNX9 186 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms