RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 CES2O00748 559 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 PDE8BO95263 885 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 METTL18O95568 372 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 LAMP2P13473 410 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 ZNF37AP17032 561 aaPredicted RBP3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 RPS6KB1P23443 525 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 NDUFS1P28331 727 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 CXCR5P32302 372 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 HOXD12P35452 270 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 IDUAP35475 653 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 GRIA3P42263 894 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 HMGA2P52926 109 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 DRG2P55039 364 aaKnown RBP3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 TPTEP56180 551 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 SUMO2P61956 95 aaKnown RBP3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 SHC2P98077 582 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 SEC23BQ15437 767 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 GPR68Q15743 365 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 FAM69AQ5T7M9 428 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 GJB7Q6PEY0 223 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 KIRREL2Q6UWL6 708 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 C17orf99Q6UX52 265 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 Q6YL49 198 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 KRBA2Q6ZNG9 492 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 MDGA2Q7Z553 956 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 PXKQ7Z7A4 578 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 PEG10Q86TG7 708 aaKnown RBP3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 RFX6Q8HWS3 928 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 P3H2Q8IVL5 708 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 ULK2Q8IYT8 1036 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 PLD5Q8N7P1 536 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 FAM110DQ8TAY7 271 aaPredicted RBP3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 IGFBPL1Q8WX77 278 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 REPS1Q96D71 796 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 ZNF845Q96IR2 970 aaPredicted RBP3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 MACROD1Q9BQ69 325 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 GLIS2Q9BZE0 524 aaPredicted RBP3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 MROH8Q9H579 483 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 MLXIPLQ9NP71 852 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 IRAK4Q9NWZ3 460 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 PPP1R14DQ9NXH3 145 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 GPR34Q9UPC5 381 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 SPATA31A5Q5VU36 1347 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 SPATA31A6Q5VVP1 1343 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 SPATA31A7Q8IWB4 1347 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 FNDC1Q4ZHG4 1894 aaPredicted RBP3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 FSD2A1L4K1 749 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 IFNL4K9M1U5 179 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 TAF4O00268 1085 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 CYR61O00622 381 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 TNPO2O14787 897 aaKnown RBP3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 FYB1O15117 783 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 LDLRAD4O15165 306 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 PEX1O43933 1283 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 PGM3O95394 542 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 ESRRBO95718 433 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 TUBB4AP04350 444 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 DLDP09622 509 aaKnown RBP3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 TNNT1P13805 278 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 ENGP17813 658 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 RAD52P43351 418 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 PCP4P48539 62 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 PDE1AP54750 535 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 ADPRHP54922 357 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 CYP4F2P78329 520 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 RPP30P78346 268 aaKnown RBP3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 TXNL4AP83876 142 aaKnown RBP3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 B4GALNT1Q00973 533 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 ZBTB16Q05516 673 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 RNASELQ05823 741 aaKnown RBP3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 FOXE3Q13461 319 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 TDGQ13569 410 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 TBCEQ15813 527 aaPredicted RBP3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 NFIL3Q16649 462 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 AARS2Q5JTZ9 985 aaKnown RBP3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 KAZNQ674X7 775 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 ITPRIPL1Q6GPH6 555 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 LAIR1Q6GTX8 287 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 PDXDC1Q6P996 788 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 TMEM88Q6PEY1 159 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 ZNF474Q6S9Z5 364 aaPredicted RBP3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 B4GALNT4Q76KP1 1039 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 MON1AQ86VX9 555 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 DIS3L2Q8IYB7 885 aaKnown RBP3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 ANKRD44Q8N8A2 993 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 ENDOVQ8N8Q3 282 aaKnown RBP3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 SETD9Q8NE22 299 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 ABHD11Q8NFV4 315 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 RFWD2Q8NHY2 731 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 METTL6Q8TCB7 284 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 NSUN4Q96CB9 384 aaKnown RBP3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 COQ10AQ96MF6 247 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 CDK5RAP1Q96SZ6 601 aaKnown RBP3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 RNF26Q9BY78 433 aaPredicted RBP3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 INTS2Q9H0H0 1204 aaKnown RBP3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 PCED1AQ9H1Q7 454 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 PRKRIP1Q9H875 184 aaPredicted RBP3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 ANKEF1Q9NU02 776 aa3.78□□□□□ -1.8
HMGN1P28-201ENST00000521340 HCN3Q9P1Z3 774 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms