RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 OSR1Q8TAX0 266 aaPredicted RBP5.7□□□□□ -1.5
HMGCS1-207ENST00000514610 NTN5Q8WTR8 489 aaPredicted RBP5.7□□□□□ -1.5
HMGCS1-207ENST00000514610 KCNJ9Q92806 393 aa5.7□□□□□ -1.5
HMGCS1-207ENST00000514610 TBATAQ96M53 351 aa5.7□□□□□ -1.5
HMGCS1-207ENST00000514610 TXNRD2Q9NNW7 524 aa5.7□□□□□ -1.5
HMGCS1-207ENST00000514610 IFT80Q9P2H3 777 aaPredicted RBP5.7□□□□□ -1.5
HMGCS1-207ENST00000514610 CRYL1Q9Y2S2 319 aa5.7□□□□□ -1.5
HMGCS1-207ENST00000514610 PKP3Q9Y446 797 aa5.7□□□□□ -1.5
HMGCS1-207ENST00000514610 EMSYQ7Z589 1322 aa5.7□□□□□ -1.5
HMGCS1-207ENST00000514610 LMTK3Q96Q04 1460 aa5.7□□□□□ -1.5
HMGCS1-207ENST00000514610 A0A1B0GVC2 190 aa5.69□□□□□ -1.5
HMGCS1-207ENST00000514610 SLC22A23A1A5C7 686 aa5.69□□□□□ -1.5
HMGCS1-207ENST00000514610 SAC3D1A6NKF1 404 aa5.69□□□□□ -1.5
HMGCS1-207ENST00000514610 DSCR3O14972 297 aa5.69□□□□□ -1.5
HMGCS1-207ENST00000514610 INPPL1O15357 1258 aa5.69□□□□□ -1.5
HMGCS1-207ENST00000514610 KLK10O43240 276 aa5.69□□□□□ -1.5
HMGCS1-207ENST00000514610 SGPL1O95470 568 aa5.69□□□□□ -1.5
HMGCS1-207ENST00000514610 CPA1P15085 419 aa5.69□□□□□ -1.5
HMGCS1-207ENST00000514610 ARSAP15289 507 aa5.69□□□□□ -1.5
HMGCS1-207ENST00000514610 RPS6KB1P23443 525 aa5.69□□□□□ -1.5
HMGCS1-207ENST00000514610 ADPRHP54922 357 aa5.69□□□□□ -1.5
HMGCS1-207ENST00000514610 SLC10A2Q12908 348 aaPredicted RBP5.69□□□□□ -1.5
HMGCS1-207ENST00000514610 ANKRD1Q15327 319 aa5.69□□□□□ -1.5
HMGCS1-207ENST00000514610 DLGAP5Q15398 846 aa5.69□□□□□ -1.5
HMGCS1-207ENST00000514610 CBWD5Q5RIA9 395 aa5.69□□□□□ -1.5
HMGCS1-207ENST00000514610 MTFR2Q6P444 385 aa5.69□□□□□ -1.5
HMGCS1-207ENST00000514610 MMS22LQ6ZRQ5 1243 aa5.69□□□□□ -1.5
HMGCS1-207ENST00000514610 PTF1AQ7RTS3 328 aa5.69□□□□□ -1.5
HMGCS1-207ENST00000514610 RNF144BQ7Z419 303 aa5.69□□□□□ -1.5
HMGCS1-207ENST00000514610 OR52N4Q8NGI2 321 aa5.69□□□□□ -1.5
HMGCS1-207ENST00000514610 FAM110DQ8TAY7 271 aaPredicted RBP5.69□□□□□ -1.5
HMGCS1-207ENST00000514610 ZFPM2Q8WW38 1151 aa5.69□□□□□ -1.5
HMGCS1-207ENST00000514610 PIGKQ92643 395 aa5.69□□□□□ -1.5
HMGCS1-207ENST00000514610 SH2D3AQ9BRG2 576 aa5.69□□□□□ -1.5
HMGCS1-207ENST00000514610 THAP1Q9NVV9 213 aa5.69□□□□□ -1.5
HMGCS1-207ENST00000514610 KLHL13Q9P2N7 655 aa5.69□□□□□ -1.5
HMGCS1-207ENST00000514610 KLQ9UEF7 1012 aa5.69□□□□□ -1.5
HMGCS1-207ENST00000514610 MAFFQ9ULX9 164 aa5.69□□□□□ -1.5
HMGCS1-207ENST00000514610 C17orf100A8MU93 164 aa5.68□□□□□ -1.5
HMGCS1-207ENST00000514610 MCIDASD6RGH6 385 aa5.68□□□□□ -1.5
HMGCS1-207ENST00000514610 DHX16O60231 1041 aaKnown RBP5.68□□□□□ -1.5
HMGCS1-207ENST00000514610 RNF8O76064 485 aa5.68□□□□□ -1.5
HMGCS1-207ENST00000514610 AKR1A1P14550 325 aa5.68□□□□□ -1.5
HMGCS1-207ENST00000514610 MPGP29372 298 aa5.68□□□□□ -1.5
HMGCS1-207ENST00000514610 TUBP50607 506 aa5.68□□□□□ -1.5
HMGCS1-207ENST00000514610 INHBEP58166 350 aa5.68□□□□□ -1.5
HMGCS1-207ENST00000514610 TLE2Q04725 743 aa5.68□□□□□ -1.5
HMGCS1-207ENST00000514610 ZBTB16Q05516 673 aa5.68□□□□□ -1.5
HMGCS1-207ENST00000514610 POU5F1BQ06416 359 aa5.68□□□□□ -1.5
HMGCS1-207ENST00000514610 ZNF268Q14587 947 aaPredicted RBP5.68□□□□□ -1.5
HMGCS1-207ENST00000514610 ARL13AQ5H913 290 aaPredicted RBP5.68□□□□□ -1.5
HMGCS1-207ENST00000514610 MEX3CQ5U5Q3 659 aaKnown RBP5.68□□□□□ -1.5
HMGCS1-207ENST00000514610 ATG16L1Q676U5 607 aa5.68□□□□□ -1.5
HMGCS1-207ENST00000514610 TMEM200AQ86VY9 491 aa5.68□□□□□ -1.5
HMGCS1-207ENST00000514610 VPS52Q8N1B4 723 aa5.68□□□□□ -1.5
HMGCS1-207ENST00000514610 PAQR4Q8N4S7 273 aaPredicted RBP5.68□□□□□ -1.5
HMGCS1-207ENST00000514610 USP38Q8NB14 1042 aa5.68□□□□□ -1.5
HMGCS1-207ENST00000514610 C2CD4CQ8TF44 421 aa5.68□□□□□ -1.5
HMGCS1-207ENST00000514610 DDB2Q92466 427 aa5.68□□□□□ -1.5
HMGCS1-207ENST00000514610 IP6K1Q92551 441 aa5.68□□□□□ -1.5
HMGCS1-207ENST00000514610 NELL1Q92832 810 aa5.68□□□□□ -1.5
HMGCS1-207ENST00000514610 MASTLQ96GX5 879 aa5.68□□□□□ -1.5
HMGCS1-207ENST00000514610 ADAD1Q96M93 576 aaKnown RBP5.68□□□□□ -1.5
HMGCS1-207ENST00000514610 PPP1R10Q96QC0 940 aaKnown RBP5.68□□□□□ -1.5
HMGCS1-207ENST00000514610 ADARB2Q9NS39 739 aaKnown RBP5.68□□□□□ -1.5
HMGCS1-207ENST00000514610 FBXO4Q9UKT5 387 aa5.68□□□□□ -1.5
HMGCS1-207ENST00000514610 WDR17Q8IZU2 1322 aa5.68□□□□□ -1.5
HMGCS1-207ENST00000514610 HOXC11O43248 304 aaPredicted RBP5.67□□□□□ -1.5
HMGCS1-207ENST00000514610 PKMP14618 531 aaKnown RBP5.67□□□□□ -1.5
HMGCS1-207ENST00000514610 MVDP53602 400 aa5.67□□□□□ -1.5
HMGCS1-207ENST00000514610 CFHR1Q03591 330 aa5.67□□□□□ -1.5
HMGCS1-207ENST00000514610 FOXF2Q12947 444 aa5.67□□□□□ -1.5
HMGCS1-207ENST00000514610 ALKBH1Q13686 389 aaKnown RBP5.67□□□□□ -1.5
HMGCS1-207ENST00000514610 SEMA3AQ14563 771 aa5.67□□□□□ -1.5
HMGCS1-207ENST00000514610 UEVLDQ8IX04 471 aa5.67□□□□□ -1.5
HMGCS1-207ENST00000514610 GALNT16Q8N428 558 aa5.67□□□□□ -1.5
HMGCS1-207ENST00000514610 ESX1Q8N693 406 aa5.67□□□□□ -1.5
HMGCS1-207ENST00000514610 ANKRD44Q8N8A2 993 aa5.67□□□□□ -1.5
HMGCS1-207ENST00000514610 ARL14EPQ8N8R7 260 aaPredicted RBP5.67□□□□□ -1.5
HMGCS1-207ENST00000514610 WIPF2Q8TF74 440 aaPredicted RBP5.67□□□□□ -1.5
HMGCS1-207ENST00000514610 HTRA1Q92743 480 aa5.67□□□□□ -1.5
HMGCS1-207ENST00000514610 STAMQ92783 540 aa5.67□□□□□ -1.5
HMGCS1-207ENST00000514610 PHF7Q9BWX1 381 aaPredicted RBP5.67□□□□□ -1.5
HMGCS1-207ENST00000514610 QTRT1Q9BXR0 403 aaKnown RBP5.67□□□□□ -1.5
HMGCS1-207ENST00000514610 FRMD8Q9BZ67 464 aaPredicted RBP5.67□□□□□ -1.5
HMGCS1-207ENST00000514610 GPR63Q9BZJ6 419 aa5.67□□□□□ -1.5
HMGCS1-207ENST00000514610 CTDSP1Q9GZU7 261 aa5.67□□□□□ -1.5
HMGCS1-207ENST00000514610 ACAD9Q9H845 621 aa5.67□□□□□ -1.5
HMGCS1-207ENST00000514610 ERVK-5Q9HDB9 667 aa5.67□□□□□ -1.5
HMGCS1-207ENST00000514610 WASH6PQ9NQA3 447 aa5.67□□□□□ -1.5
HMGCS1-207ENST00000514610 DTX4Q9Y2E6 619 aa5.67□□□□□ -1.5
HMGCS1-207ENST00000514610 C2CD4BA6NLJ0 364 aa5.66□□□□□ -1.5
HMGCS1-207ENST00000514610 PEX12O00623 359 aa5.66□□□□□ -1.5
HMGCS1-207ENST00000514610 TUBB4AP04350 444 aa5.66□□□□□ -1.5
HMGCS1-207ENST00000514610 TRPC3Q13507 836 aa5.66□□□□□ -1.5
HMGCS1-207ENST00000514610 PGM5Q15124 567 aa5.66□□□□□ -1.5
HMGCS1-207ENST00000514610 GPR162Q16538 588 aa5.66□□□□□ -1.5
HMGCS1-207ENST00000514610 GXYLT1Q4G148 440 aa5.66□□□□□ -1.5
HMGCS1-207ENST00000514610 RUNDC3AQ59EK9 446 aa5.66□□□□□ -1.5
HMGCS1-207ENST00000514610 KIAA1755Q5JYT7 1200 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms