RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 OR1E1P30953 314 aa11.17□□□□□ -0.62
PFDN1-204ENST00000512707 SLC6A4P31645 630 aa11.17□□□□□ -0.62
PFDN1-204ENST00000512707 ETFBP38117 255 aa11.17□□□□□ -0.62
PFDN1-204ENST00000512707 PLA2G5P39877 138 aa11.17□□□□□ -0.62
PFDN1-204ENST00000512707 KLF1Q13351 362 aaPredicted RBP11.17□□□□□ -0.62
PFDN1-204ENST00000512707 ZNF177Q13360 481 aaPredicted RBP11.17□□□□□ -0.62
PFDN1-204ENST00000512707 PDK1Q15118 436 aa11.17□□□□□ -0.62
PFDN1-204ENST00000512707 MPP7Q5T2T1 576 aa11.17□□□□□ -0.62
PFDN1-204ENST00000512707 C6orf118Q5T5N4 469 aa11.17□□□□□ -0.62
PFDN1-204ENST00000512707 ZNF572Q7Z3I7 529 aaPredicted RBP11.17□□□□□ -0.62
PFDN1-204ENST00000512707 RTL3Q8N8U3 475 aaKnown RBP11.17□□□□□ -0.62
PFDN1-204ENST00000512707 DEPDC1BQ8WUY9 529 aa11.17□□□□□ -0.62
PFDN1-204ENST00000512707 OSCP1Q8WVF1 389 aa11.17□□□□□ -0.62
PFDN1-204ENST00000512707 ATP2A3Q93084 1043 aa11.17□□□□□ -0.62
PFDN1-204ENST00000512707 ELSPBP1Q96BH3 223 aa11.17□□□□□ -0.62
PFDN1-204ENST00000512707 MYADMQ96S97 322 aa11.17□□□□□ -0.62
PFDN1-204ENST00000512707 AP1M1Q9BXS5 423 aa11.17□□□□□ -0.62
PFDN1-204ENST00000512707 BRD8Q9H0E9 1235 aa11.17□□□□□ -0.62
PFDN1-204ENST00000512707 RRAGDQ9NQL2 400 aaPredicted RBP11.17□□□□□ -0.62
PFDN1-204ENST00000512707 TMEM248Q9NWD8 314 aa11.17□□□□□ -0.62
PFDN1-204ENST00000512707 EPS15L1Q9UBC2 864 aa11.17□□□□□ -0.62
PFDN1-204ENST00000512707 C2orf16Q68DN1 1984 aa11.17□□□□□ -0.62
PFDN1-204ENST00000512707 HELZP42694 1942 aaKnown RBP11.17□□□□□ -0.62
PFDN1-204ENST00000512707 WASH4PA8MWX3 477 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 H0Y626 953 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 SCAMP3O14828 347 aaKnown RBP11.16□□□□□ -0.62
PFDN1-204ENST00000512707 DCLK1O15075 740 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 MBTPS2O43462 519 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 TBL1XO60907 577 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 PHF2O75151 1096 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 ECI2O75521 394 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 STK10O94804 968 aaKnown RBP11.16□□□□□ -0.62
PFDN1-204ENST00000512707 CHRNA3P32297 505 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 VIPR2P41587 438 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 NDST2P52849 883 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 VCPP55072 806 aaKnown RBP11.16□□□□□ -0.62
PFDN1-204ENST00000512707 ZXDBP98169 803 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 NR1H3Q13133 447 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 CDH18Q13634 790 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 PAFAH1B3Q15102 231 aaKnown RBP11.16□□□□□ -0.62
PFDN1-204ENST00000512707 CCNG2Q16589 344 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 LEXMQ3ZCV2 418 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 PARP15Q460N3 678 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 C5orf22Q49AR2 442 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 NCBP2-AS2Q69YL0 99 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 C1orf228Q6PIY5 440 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 TFAP2DQ7Z6R9 452 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 C14orf80Q86SX3 495 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 SETD3Q86TU7 594 aaPredicted RBP11.16□□□□□ -0.62
PFDN1-204ENST00000512707 ZNF354CQ86Y25 554 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 LRRC49Q8IUZ0 686 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 CDKL3Q8IVW4 592 aaPredicted RBP11.16□□□□□ -0.62
PFDN1-204ENST00000512707 MFSD6LQ8IWD5 586 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 CPA6Q8N4T0 437 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 PQLC3Q8N755 202 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 PLD5Q8N7P1 536 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 SPATA4Q8NEY3 305 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 CCDC26Q8TAB7 109 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 GRK7Q8WTQ7 553 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 IGSF8Q969P0 613 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 WBP2Q969T9 261 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 MAGOHBQ96A72 148 aaKnown RBP11.16□□□□□ -0.62
PFDN1-204ENST00000512707 PHF7Q9BWX1 381 aaPredicted RBP11.16□□□□□ -0.62
PFDN1-204ENST00000512707 CARD6Q9BX69 1037 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 MAGEB5Q9BZ81 275 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 SPHK2Q9NRA0 654 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 MPP6Q9NZW5 540 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 WNT6Q9Y6F9 365 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 NUP210Q8TEM1 1887 aaPredicted RBP11.16□□□□□ -0.62
PFDN1-204ENST00000512707 XIRP2A4UGR9 3374 aa11.16□□□□□ -0.62
PFDN1-204ENST00000512707 NOTCH4Q99466 2003 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 CFAP69A5D8W1 941 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 GRXCR2A6NFK2 248 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 ARHGAP42A6NI28 874 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 HACD1B0YJ81 288 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 H7C0C1 242 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 TRDMT1O14717 391 aaKnown RBP11.15□□□□□ -0.62
PFDN1-204ENST00000512707 MTSS1O43312 755 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 RAMP2O60895 175 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 SLU7O95391 586 aaKnown RBP11.15□□□□□ -0.62
PFDN1-204ENST00000512707 GAS8O95995 478 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 RHOCP08134 193 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 PSMC3P17980 439 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 ATP5OP48047 213 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 FNTAP49354 379 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 YBEYP58557 167 aaPredicted RBP11.15□□□□□ -0.62
PFDN1-204ENST00000512707 EIF3EP60228 445 aaKnown RBP11.15□□□□□ -0.62
PFDN1-204ENST00000512707 RPS24P62847 133 aaKnown RBP11.15□□□□□ -0.62
PFDN1-204ENST00000512707 OTUD4Q01804 1114 aaKnown RBP11.15□□□□□ -0.62
PFDN1-204ENST00000512707 XRCC4Q13426 336 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 BYSLQ13895 437 aaKnown RBP11.15□□□□□ -0.62
PFDN1-204ENST00000512707 NOMO1Q15155 1222 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 AAK1Q2M2I8 961 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 ANO4Q32M45 955 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 ZNF783Q6ZMS7 281 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 TPGS1Q6ZTW0 290 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 GSTA5Q7RTV2 222 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 ANKS1BQ7Z6G8 1248 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 NLRP14Q86W24 1093 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 MFN1Q8IWA4 741 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms