RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 PPP1R7Q15435 360 aa9.39□□□□□ -0.91
NR1I3-230ENST00000511944 RAB30Q15771 203 aa9.39□□□□□ -0.91
NR1I3-230ENST00000511944 ZC3H12AQ5D1E8 599 aaKnown RBP9.39□□□□□ -0.91
NR1I3-230ENST00000511944 PPP6R3Q5H9R7 873 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-230ENST00000511944 MANEALQ5VSG8 457 aa9.39□□□□□ -0.91
NR1I3-230ENST00000511944 KAZNQ674X7 775 aa9.39□□□□□ -0.91
NR1I3-230ENST00000511944 RFX8Q6ZV50 586 aa9.39□□□□□ -0.91
NR1I3-230ENST00000511944 TMC7Q7Z402 723 aa9.39□□□□□ -0.91
NR1I3-230ENST00000511944 ANKS1BQ7Z6G8 1248 aa9.39□□□□□ -0.91
NR1I3-230ENST00000511944 PCGF5Q86SE9 256 aa9.39□□□□□ -0.91
NR1I3-230ENST00000511944 ELMOD1Q8N336 334 aa9.39□□□□□ -0.91
NR1I3-230ENST00000511944 MREGQ8N565 214 aa9.39□□□□□ -0.91
NR1I3-230ENST00000511944 PQLC3Q8N755 202 aa9.39□□□□□ -0.91
NR1I3-230ENST00000511944 ACTL9Q8TC94 416 aa9.39□□□□□ -0.91
NR1I3-230ENST00000511944 SPPL3Q8TCT6 385 aa9.39□□□□□ -0.91
NR1I3-230ENST00000511944 AENQ8WTP8 325 aaKnown RBP9.39□□□□□ -0.91
NR1I3-230ENST00000511944 NDRG1Q92597 394 aaKnown RBP9.39□□□□□ -0.91
NR1I3-230ENST00000511944 EDEM1Q92611 657 aa9.39□□□□□ -0.91
NR1I3-230ENST00000511944 DPF3Q92784 378 aa9.39□□□□□ -0.91
NR1I3-230ENST00000511944 CASP10Q92851 521 aa9.39□□□□□ -0.91
NR1I3-230ENST00000511944 PLD4Q96BZ4 506 aa9.39□□□□□ -0.91
NR1I3-230ENST00000511944 ZNF837Q96EG3 531 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-230ENST00000511944 SNF8Q96H20 258 aa9.39□□□□□ -0.91
NR1I3-230ENST00000511944 KLHL5Q96PQ7 755 aa9.39□□□□□ -0.91
NR1I3-230ENST00000511944 TCF25Q9BQ70 676 aa9.39□□□□□ -0.91
NR1I3-230ENST00000511944 FRMD8Q9BZ67 464 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-230ENST00000511944 TKTL2Q9H0I9 626 aa9.39□□□□□ -0.91
NR1I3-230ENST00000511944 ARHGEF4Q9NR80 690 aa9.39□□□□□ -0.91
NR1I3-230ENST00000511944 KLHL11Q9NVR0 708 aa9.39□□□□□ -0.91
NR1I3-230ENST00000511944 CWC15Q9P013 229 aaKnown RBP9.39□□□□□ -0.91
NR1I3-230ENST00000511944 PPARGC1AQ9UBK2 798 aaKnown RBP9.39□□□□□ -0.91
NR1I3-230ENST00000511944 OR12D3Q9UGF7 316 aa9.39□□□□□ -0.91
NR1I3-230ENST00000511944 ZMYND8Q9ULU4 1186 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-230ENST00000511944 R3HDM2Q9Y2K5 976 aaKnown RBP9.39□□□□□ -0.91
NR1I3-230ENST00000511944 ZNF840PA6NDX5 716 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 H3BNC9 293 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 PPP1R12AO14974 1030 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-230ENST00000511944 DCLK1O15075 740 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 TGM5O43548 720 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 OLFM2O95897 454 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 OAS1P00973 400 aaKnown RBP9.38□□□□□ -0.91
NR1I3-230ENST00000511944 RBP3P10745 1247 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 RPL17P18621 184 aaKnown RBP9.38□□□□□ -0.91
NR1I3-230ENST00000511944 MX2P20592 715 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 DDX6P26196 483 aaKnown RBP eCLIP9.38□□□□□ -0.91
NR1I3-230ENST00000511944 KLRC2P26717 231 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 CDC25CP30307 473 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 MAGEA10P43363 369 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-230ENST00000511944 EPHA5P54756 1037 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 MLLT6P55198 1093 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-230ENST00000511944 TBX4P57082 545 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 TPI1P60174 286 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 EIF3EP60228 445 aaKnown RBP9.38□□□□□ -0.91
NR1I3-230ENST00000511944 ADCY2Q08462 1091 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 PDK1Q15118 436 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 TAF12Q16514 161 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 CA9Q16790 459 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 RAB6CQ53S08 254 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 SLC45A4Q5BKX6 768 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 C10orf120Q5SQS8 335 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 BEND6Q5SZJ8 279 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-230ENST00000511944 HECTD3Q5T447 861 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 NCBP2-AS2Q69YL0 99 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 ADAT2Q7Z6V5 191 aaKnown RBP9.38□□□□□ -0.91
NR1I3-230ENST00000511944 HOOK3Q86VS8 718 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 KIAA1958Q8N8K9 716 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 POF1BQ8WVV4 589 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 C1orf54Q8WWF1 131 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 NANOS1Q8WY41 292 aaKnown RBP9.38□□□□□ -0.91
NR1I3-230ENST00000511944 ATG4AQ8WYN0 398 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 FATE1Q969F0 183 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 RNF34Q969K3 372 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 ACSF2Q96CM8 615 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-230ENST00000511944 LRRC45Q96CN5 670 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 FCRL2Q96LA5 508 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-230ENST00000511944 ZNF512Q96ME7 567 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-230ENST00000511944 OLFM3Q96PB7 478 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 QKIQ96PU8 341 aaKnown RBP eCLIP9.38□□□□□ -0.91
NR1I3-230ENST00000511944 RAB6CQ9H0N0 254 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 CATSPERBQ9H7T0 1116 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 ENTPD7Q9NQZ7 604 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 OSER1Q9NX31 292 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 ZDHHC7Q9NXF8 308 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 ZDHHC3Q9NYG2 299 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 MARCH2Q9P0N8 246 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 MTRF1LQ9UGC7 380 aaKnown RBP9.38□□□□□ -0.91
NR1I3-230ENST00000511944 DNPEPQ9ULA0 475 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 ZNF148Q9UQR1 794 aa9.38□□□□□ -0.91
NR1I3-230ENST00000511944 MYO16Q9Y6X6 1858 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 IGLV3-10A0A075B6K4 115 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.37□□□□□ -0.91
NR1I3-230ENST00000511944 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.37□□□□□ -0.91
NR1I3-230ENST00000511944 LCHNA4D1U4 455 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 STK10O94804 968 aaKnown RBP9.37□□□□□ -0.91
NR1I3-230ENST00000511944 SEC31AO94979 1220 aaKnown RBP9.37□□□□□ -0.91
NR1I3-230ENST00000511944 LRG1P02750 347 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 GOT1P17174 413 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 BMP8BP34820 402 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 ACTN2P35609 894 aa9.37□□□□□ -0.91
NR1I3-230ENST00000511944 CLCN4P51793 760 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms