RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 SPATA21Q7Z572 469 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 TRIM48Q8IWZ4 208 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 FBXO22Q8NEZ5 403 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 PGM2Q96G03 612 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 PLEKHA8Q96JA3 519 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 CNBD2Q96M20 576 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 BBS4Q96RK4 519 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 MUC3BQ9H195 1237 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 RGS18Q9NS28 235 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 GREB1LQ9C091 1923 aaPredicted RBP5.04□□□□□ -1.6
PTPN13-209ENST00000511467 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.04□□□□□ -1.6
PTPN13-209ENST00000511467 CENPXA8MT69 81 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 POC1B-GALNT4F8VUJ3 575 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 H3BM21 787 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 KCNN4O15554 427 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 ATP9BO43861 1147 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 PPP1R37O75864 691 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 DCKP27707 260 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 ERVK-9P63128 1117 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 ERVK-24P63145 666 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 SEL1L3Q68CR1 1132 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 ERICH5Q6P6B1 374 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 TMEM132CQ8N3T6 1108 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 NBPF15Q8N660 670 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 NIPA2Q8N8Q9 360 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 SLC7A5P2Q9GIP4 190 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 IARS2Q9NSE4 1012 aaKnown RBP5.04□□□□□ -1.6
PTPN13-209ENST00000511467 KCNK4Q9NYG8 393 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 SNX9Q9Y5X1 595 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 COLEC10Q9Y6Z7 277 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 SAGE2PA6NJ88 616 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 SORBS3O60504 671 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 AVILO75366 819 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 PROSCO94903 275 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 CAPN1P07384 714 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 CBSLP0DN79 551 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 PGAM1P18669 254 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 CBSP35520 551 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 TSNQ15631 228 aaKnown RBP5.04□□□□□ -1.6
PTPN13-209ENST00000511467 PROSER3Q2NL68 480 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.04□□□□□ -1.6
PTPN13-209ENST00000511467 ATP13A4Q4VNC1 1196 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 KBTBD2Q8IY47 623 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 EID3Q8N140 333 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 BLOC1S5Q8TDH9 187 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 ACTRT2Q8TDY3 377 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 DYDC2Q96IM9 177 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 ZFP42Q96MM3 310 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 TEFMQ96QE5 360 aaKnown RBP5.04□□□□□ -1.6
PTPN13-209ENST00000511467 TUBGCP5Q96RT8 1024 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 CDCA3Q99618 268 aaPredicted RBP5.04□□□□□ -1.6
PTPN13-209ENST00000511467 C9orf16Q9BUW7 83 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 MRM3Q9HC36 420 aaKnown RBP5.04□□□□□ -1.6
PTPN13-209ENST00000511467 GPRC5DQ9NZD1 345 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 CALML5Q9NZT1 146 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 PRPF19Q9UMS4 504 aaKnown RBP5.04□□□□□ -1.6
PTPN13-209ENST00000511467 DNAJC16Q9Y2G8 782 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 PRDX5P30044 214 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 HERVK_113P62684 666 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 POU4F1Q01851 419 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 ANGPT1Q15389 498 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 CDKL4Q5MAI5 379 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 TMC8Q8IU68 726 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 ADHFE1Q8IWW8 467 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 ANKLE1Q8NAG6 615 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 OR6P1Q8NGX9 317 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 FBXO32Q969P5 355 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 HHIPL1Q96JK4 782 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 PLEKHG4BQ96PX9 1271 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 YME1L1Q96TA2 773 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 MRPL57Q9BQC6 102 aaKnown RBP5.04□□□□□ -1.6
PTPN13-209ENST00000511467 ARHGAP39Q9C0H5 1083 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 CXorf56Q9H5V9 222 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 DHX35Q9H5Z1 703 aaKnown RBP5.04□□□□□ -1.6
PTPN13-209ENST00000511467 POPDC2Q9HBU9 364 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 RAVER2Q9HCJ3 691 aaKnown RBP5.04□□□□□ -1.6
PTPN13-209ENST00000511467 FAM217BQ9NTX9 383 aaPredicted RBP5.04□□□□□ -1.6
PTPN13-209ENST00000511467 C20orf96Q9NUD7 363 aaPredicted RBP5.04□□□□□ -1.6
PTPN13-209ENST00000511467 DOLKQ9UPQ8 538 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 PCDHGB1Q9Y5G3 927 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 DOCK7Q96N67 2140 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 C5orf60A6NFR6 353 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 SPATA31C2B4DYI2 1134 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 CFLARO15519 480 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 TALDO1P37837 337 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 SULT1E1P49888 294 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 TUBP50607 506 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 CCNG1P51959 295 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 ATP13A5Q4VNC0 1218 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 VARS2Q5ST30 1063 aaKnown RBP5.04□□□□□ -1.6
PTPN13-209ENST00000511467 RASIP1Q5U651 963 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 AP1ARQ63HQ0 302 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 PHF13Q86YI8 300 aaPredicted RBP5.04□□□□□ -1.6
PTPN13-209ENST00000511467 TBC1D10CQ8IV04 446 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 LRRC34Q8IZ02 419 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 ADAMTS18Q8TE60 1221 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 SH3KBP1Q96B97 665 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 PSKH2Q96QS6 385 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 COG4Q9H9E3 785 aa5.04□□□□□ -1.6
PTPN13-209ENST00000511467 DNAJB4Q9UDY4 337 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms