RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 M0QYT0 321 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 SLC9A3R1O14745 358 aaPredicted RBP7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 SART1O43290 800 aaKnown RBP7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 WIPF1O43516 503 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 MFAP3LO75121 409 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 PAGE1O75459 146 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 CNTN5O94779 1100 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 ENDOD1O94919 500 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 LATS1O95835 1130 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 TPM2P07951 284 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 TACR2P21452 398 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 DRD1P21728 446 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 CASP14P31944 242 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 NOS2P35228 1153 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 RFC1P35251 1148 aaPredicted RBP7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 PLA2G5P39877 138 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 NBL1P41271 181 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 IL12RB1P42701 662 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 WASP42768 502 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 CTSOP43234 321 aaPredicted RBP7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 SCTRP47872 440 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 FNTBP49356 437 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 CXCR3P49682 368 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 EPHA4P54764 986 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 COG7P83436 770 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 LMAN2Q12907 356 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 ENPP2Q13822 863 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 LRRC32Q14392 662 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 ANO4Q32M45 955 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 ALFQ53S48 1182 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 C10orf76Q5T2E6 689 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 FAM72AQ5TYM5 149 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 GRAMD4Q6IC98 578 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 FAM72DQ6L9T8 149 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 TRIM72Q6ZMU5 477 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 TADA2BQ86TJ2 420 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 ERICH1Q86X53 443 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 FAM72BQ86X60 149 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 FAM131BQ86XD5 332 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 SPEM1Q8N4L4 309 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 CCDC33Q8N5R6 958 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 ZBTB44Q8NCP5 570 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 C3orf20Q8ND61 904 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 MDGA1Q8NFP4 955 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 RXFP2Q8WXD0 754 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 CENPIQ92674 756 aaPredicted RBP7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 C18orf8Q96DM3 657 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 ALG14Q96F25 216 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 PGAP3Q96FM1 320 aaPredicted RBP7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 MRGPRX3Q96LB0 322 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 KCTD15Q96SI1 283 aaPredicted RBP7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 PNKPQ96T60 521 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 DNAJC7Q99615 494 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 MTG2Q9H4K7 406 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 ZNF358Q9NW07 568 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 STRIP2Q9ULQ0 834 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 MMP17Q9ULZ9 603 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 CAPN11Q9UMQ6 739 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 SLC27A6Q9Y2P4 619 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 MYO18AQ92614 2054 aaKnown RBP7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 DOCK4Q8N1I0 1966 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 A0A087X0T9 212 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 TMCO5BA8MYB1 307 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 WASH3PC4AMC7 463 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 RNF103O00237 685 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 TBL1XO60907 577 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 KLF8O95600 359 aaPredicted RBP7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 CAVIN2O95810 425 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 FAM228BP0C875 321 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 BCKDHBP21953 392 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 HNRNPH3P31942 346 aaKnown RBP7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 GRIA2P42262 883 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 MAGEA9P43362 315 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 PTPN9P43378 593 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 DGKGP49619 791 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 WDR4P57081 412 aaKnown RBP7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 RNASE9P60153 205 aaKnown RBP7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 ZBED6P86452 979 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 ATP11AP98196 1134 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 CSTF1Q05048 431 aaKnown RBP7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 GRSF1Q12849 480 aaKnown RBP eCLIP7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 NME3Q13232 169 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 DMC1Q14565 340 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 PPP2R5DQ14738 602 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 CA9Q16790 459 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 SLC25A52Q3SY17 297 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 C5orf22Q49AR2 442 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 EFHC1Q5JVL4 640 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 ADGRF1Q5T601 910 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 SFMBT2Q5VUG0 894 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 NUGGCQ68CJ6 796 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 PLEKHA7Q6IQ23 1121 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 ACAD10Q6JQN1 1059 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 FBXL22Q6P050 247 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 C1orf228Q6PIY5 440 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 ARCQ7LC44 396 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 CACNA2D4Q7Z3S7 1137 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 RASSF3Q86WH2 238 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 CHSY1Q86X52 802 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 ZDHHC17Q8IUH5 632 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms