RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 USP8P40818 1118 aa11.93□□□□□ -0.5
HMGCS1-204ENST00000507293 PSMD8P48556 350 aa11.93□□□□□ -0.5
HMGCS1-204ENST00000507293 NUMBP49757 651 aa11.93□□□□□ -0.5
HMGCS1-204ENST00000507293 CCT8P50990 548 aa11.93□□□□□ -0.5
HMGCS1-204ENST00000507293 YWHAZP63104 245 aaKnown RBP11.93□□□□□ -0.5
HMGCS1-204ENST00000507293 ECT2LQ008S8 904 aa11.93□□□□□ -0.5
HMGCS1-204ENST00000507293 APBA1Q02410 837 aa11.93□□□□□ -0.5
HMGCS1-204ENST00000507293 TAF5Q15542 800 aa11.93□□□□□ -0.5
HMGCS1-204ENST00000507293 ARHGAP44Q17R89 818 aa11.93□□□□□ -0.5
HMGCS1-204ENST00000507293 KCNT1Q5JUK3 1230 aa11.93□□□□□ -0.5
HMGCS1-204ENST00000507293 C9orf64Q5T6V5 341 aa11.93□□□□□ -0.5
HMGCS1-204ENST00000507293 RNF219Q5W0B1 726 aaPredicted RBP11.93□□□□□ -0.5
HMGCS1-204ENST00000507293 DBX2Q6ZNG2 339 aa11.93□□□□□ -0.5
HMGCS1-204ENST00000507293 ENOSF1Q7L5Y1 443 aa11.93□□□□□ -0.5
HMGCS1-204ENST00000507293 ADAT2Q7Z6V5 191 aaKnown RBP11.93□□□□□ -0.5
HMGCS1-204ENST00000507293 CREBRFQ8IUR6 639 aa11.93□□□□□ -0.5
HMGCS1-204ENST00000507293 MMAAQ8IVH4 418 aaKnown RBP11.93□□□□□ -0.5
HMGCS1-204ENST00000507293 APCDD1Q8J025 514 aa11.93□□□□□ -0.5
HMGCS1-204ENST00000507293 ATP6V0D2Q8N8Y2 350 aa11.93□□□□□ -0.5
HMGCS1-204ENST00000507293 KDM1BQ8NB78 822 aa11.93□□□□□ -0.5
HMGCS1-204ENST00000507293 IGSF8Q969P0 613 aa11.93□□□□□ -0.5
HMGCS1-204ENST00000507293 BTN2A3PQ96KV6 586 aa11.93□□□□□ -0.5
HMGCS1-204ENST00000507293 SLC6A18Q96N87 628 aa11.93□□□□□ -0.5
HMGCS1-204ENST00000507293 MED15Q96RN5 788 aa11.93□□□□□ -0.5
HMGCS1-204ENST00000507293 CDC6Q99741 560 aa11.93□□□□□ -0.5
HMGCS1-204ENST00000507293 THAP9Q9H5L6 903 aa11.93□□□□□ -0.5
HMGCS1-204ENST00000507293 FAM204AQ9H8W3 233 aa11.93□□□□□ -0.5
HMGCS1-204ENST00000507293 TOR4AQ9NXH8 423 aa11.93□□□□□ -0.5
HMGCS1-204ENST00000507293 SLCO3A1Q9UIG8 710 aa11.93□□□□□ -0.5
HMGCS1-204ENST00000507293 SYNJ2BP-COX16A0A087WUM0 186 aa11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 EDDM13A0A1B0GTR0 161 aa11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 A0A1W2PPC4 97 aa11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 TARSL2A2RTX5 802 aaKnown RBP11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 GOLGA8CPA6NN73 597 aa11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 H0Y8X5 98 aa11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 RNASEH2AO75792 299 aaKnown RBP11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 ATXN1LP0C7T5 689 aaKnown RBP11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 PDGFRAP16234 1089 aa11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 SLC9A1P19634 815 aa11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 CTSKP43235 329 aa11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 STK19P49842 368 aaPredicted RBP11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 GALCP54803 685 aa11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 IL9RQ01113 521 aa11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 SCAPQ12770 1279 aa11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 SFSWAPQ12872 951 aaKnown RBP11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 ARID5BQ14865 1188 aa11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 SUZ12Q15022 739 aaKnown RBP11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 NCEH1Q6PIU2 408 aa11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 CCNI2Q6ZMN8 369 aaPredicted RBP11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 CIR1Q86X95 450 aaPredicted RBP11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 PASD1Q8IV76 773 aa11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 DEFB106AQ8N104 65 aa11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 STK40Q8N2I9 435 aa11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 RPL10LQ96L21 214 aaKnown RBP11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 FAM81BQ96LP2 452 aa11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 CPXM1Q96SM3 734 aa11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 PRMT1Q99873 361 aaKnown RBP11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 OMDQ99983 421 aa11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 NEUROG2Q9H2A3 272 aa11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 COX16Q9P0S2 106 aa11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 APEX2Q9UBZ4 518 aa11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 RWDD2AQ9UIY3 292 aa11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 FZD4Q9ULV1 537 aa11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 CABIN1Q9Y6J0 2220 aa11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 COL5A1P20908 1838 aaPredicted RBP11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 CHD6Q8TD26 2715 aa11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 KNL1Q8NG31 2342 aa11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 ADAMTS20P59510 1910 aa11.92□□□□□ -0.5
HMGCS1-204ENST00000507293 FAM208BQ5VWN6 2430 aa11.91□□□□□ -0.5
HMGCS1-204ENST00000507293 LRRC72A6NJI9 287 aa11.91□□□□□ -0.5
HMGCS1-204ENST00000507293 KCNU1A8MYU2 1149 aa11.91□□□□□ -0.5
HMGCS1-204ENST00000507293 TAF4O00268 1085 aa11.91□□□□□ -0.5
HMGCS1-204ENST00000507293 VILLO15195 856 aa11.91□□□□□ -0.5
HMGCS1-204ENST00000507293 CAPNS1P04632 268 aa11.91□□□□□ -0.5
HMGCS1-204ENST00000507293 VAV1P15498 845 aa11.91□□□□□ -0.5
HMGCS1-204ENST00000507293 MZF1P28698 734 aaPredicted RBP11.91□□□□□ -0.5
HMGCS1-204ENST00000507293 SLC8A1P32418 973 aa11.91□□□□□ -0.5
HMGCS1-204ENST00000507293 C21orf59P57076 290 aa11.91□□□□□ -0.5
HMGCS1-204ENST00000507293 RACK1P63244 317 aaKnown RBP11.91□□□□□ -0.5
HMGCS1-204ENST00000507293 CDK17Q00537 523 aa11.91□□□□□ -0.5
HMGCS1-204ENST00000507293 CENPCQ03188 943 aa11.91□□□□□ -0.5
HMGCS1-204ENST00000507293 EIF4EBP2Q13542 120 aaPredicted RBP11.91□□□□□ -0.5
HMGCS1-204ENST00000507293 GBP6Q6ZN66 633 aa11.91□□□□□ -0.5
HMGCS1-204ENST00000507293 PROSER1Q86XN7 944 aa11.91□□□□□ -0.5
HMGCS1-204ENST00000507293 CCAR2Q8N163 923 aaKnown RBP11.91□□□□□ -0.5
HMGCS1-204ENST00000507293 WDTC1Q8N5D0 677 aa11.91□□□□□ -0.5
HMGCS1-204ENST00000507293 AADATQ8N5Z0 425 aa11.91□□□□□ -0.5
HMGCS1-204ENST00000507293 OR2T34Q8NGX1 318 aa11.91□□□□□ -0.5
HMGCS1-204ENST00000507293 SHC3Q92529 594 aa11.91□□□□□ -0.5
HMGCS1-204ENST00000507293 PTPRN2Q92932 1015 aa11.91□□□□□ -0.5
HMGCS1-204ENST00000507293 RNF34Q969K3 372 aa11.91□□□□□ -0.5
HMGCS1-204ENST00000507293 SLC2A13Q96QE2 648 aa11.91□□□□□ -0.5
HMGCS1-204ENST00000507293 FAM129BQ96TA1 746 aa11.91□□□□□ -0.5
HMGCS1-204ENST00000507293 ACE2Q9BYF1 805 aaPredicted RBP11.91□□□□□ -0.5
HMGCS1-204ENST00000507293 DDIT4Q9NX09 232 aa11.91□□□□□ -0.5
HMGCS1-204ENST00000507293 ADAMTS1Q9UHI8 967 aa11.91□□□□□ -0.5
HMGCS1-204ENST00000507293 SLC12A6Q9UHW9 1150 aa11.91□□□□□ -0.5
HMGCS1-204ENST00000507293 AJAP1Q9UKB5 411 aaPredicted RBP11.91□□□□□ -0.5
HMGCS1-204ENST00000507293 DOCK9Q9BZ29 2069 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms