RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 PABPC1P11940 636 aaKnown RBP7.52□□□□□ -1.21
VCAN-207ENST00000507162 FDPSP14324 419 aaKnown RBP7.52□□□□□ -1.21
VCAN-207ENST00000507162 HLA-FP30511 346 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 MAPK10P53779 464 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 SLC12A3P55017 1021 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 MAP3K7CLP57077 242 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 GUCY1B3Q02153 619 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 NR0B2Q15466 257 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 DEFB133Q30KQ1 61 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 KMT5BQ4FZB7 885 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 LACTB2Q53H82 288 aaPredicted RBP7.52□□□□□ -1.21
VCAN-207ENST00000507162 ARSHQ5FYA8 562 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 TTC38Q5R3I4 469 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 ZCCHC8Q6NZY4 707 aaKnown RBP7.52□□□□□ -1.21
VCAN-207ENST00000507162 SV2AQ7L0J3 742 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 LIMS2Q7Z4I7 341 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 B3GNT8Q7Z7M8 397 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 ADIPOR2Q86V24 386 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 ZC3H3Q8IXZ2 948 aaKnown RBP7.52□□□□□ -1.21
VCAN-207ENST00000507162 AADATQ8N5Z0 425 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 B3GALNT2Q8NCR0 500 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 GALNT11Q8NCW6 608 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 KLK6Q92876 244 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 USP7Q93009 1102 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 JAKMIP2Q96AA8 810 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 POM121Q96HA1 1249 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 ANKRD36BP1Q96IX9 119 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 PPP1R13BQ96KQ4 1090 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 FOXP3Q9BZS1 431 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 DCLK3Q9C098 648 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 NMUR1Q9HB89 426 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 ZSWIM6Q9HCJ5 1215 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 PREBQ9HCU5 417 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 DMAP1Q9NPF5 467 aaPredicted RBP7.52□□□□□ -1.21
VCAN-207ENST00000507162 DNAJC28Q9NX36 388 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 DONSONQ9NYP3 566 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 RBAKQ9NYW8 714 aaPredicted RBP7.52□□□□□ -1.21
VCAN-207ENST00000507162 DKK3Q9UBP4 350 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 RASAL2Q9UJF2 1139 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 ACSL6Q9UKU0 697 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 TPX2Q9ULW0 747 aaKnown RBP7.52□□□□□ -1.21
VCAN-207ENST00000507162 STYXL1Q9Y6J8 313 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 ANKHD1Q8IWZ3 2542 aaKnown RBP7.52□□□□□ -1.21
VCAN-207ENST00000507162 DNHD1Q96M86 4753 aa7.52□□□□□ -1.21
VCAN-207ENST00000507162 FAM92AA1XBS5 289 aa7.51□□□□□ -1.21
VCAN-207ENST00000507162 TTLL8A6PVC2 850 aa7.51□□□□□ -1.21
VCAN-207ENST00000507162 TMX2-CTNND1H3BSU7 103 aa7.51□□□□□ -1.21
VCAN-207ENST00000507162 BEST1O76090 585 aa7.51□□□□□ -1.21
VCAN-207ENST00000507162 IL1BP01584 269 aa7.51□□□□□ -1.21
VCAN-207ENST00000507162 TNNC2P02585 160 aa7.51□□□□□ -1.21
VCAN-207ENST00000507162 ITIH1P19827 911 aa7.51□□□□□ -1.21
VCAN-207ENST00000507162 SCP2P22307 547 aa7.51□□□□□ -1.21
VCAN-207ENST00000507162 COG7P83436 770 aa7.51□□□□□ -1.21
VCAN-207ENST00000507162 GTF2BQ00403 316 aa7.51□□□□□ -1.21
VCAN-207ENST00000507162 EFEMP1Q12805 493 aa7.51□□□□□ -1.21
VCAN-207ENST00000507162 EIF3IQ13347 325 aaKnown RBP7.51□□□□□ -1.21
VCAN-207ENST00000507162 GNL2Q13823 731 aaKnown RBP7.51□□□□□ -1.21
VCAN-207ENST00000507162 EIF2S3LQ2VIR3 472 aaKnown RBP7.51□□□□□ -1.21
VCAN-207ENST00000507162 MPPE1Q53F39 396 aa7.51□□□□□ -1.21
VCAN-207ENST00000507162 PAQR9Q6ZVX9 377 aa7.51□□□□□ -1.21
VCAN-207ENST00000507162 RSRC2Q7L4I2 434 aaKnown RBP7.51□□□□□ -1.21
VCAN-207ENST00000507162 TADA2BQ86TJ2 420 aa7.51□□□□□ -1.21
VCAN-207ENST00000507162 FAM35AQ86V20 835 aa7.51□□□□□ -1.21
VCAN-207ENST00000507162 GPBP1Q86WP2 473 aa7.51□□□□□ -1.21
VCAN-207ENST00000507162 BRSK2Q8IWQ3 736 aa7.51□□□□□ -1.21
VCAN-207ENST00000507162 AHI1Q8N157 1196 aa7.51□□□□□ -1.21
VCAN-207ENST00000507162 C4orf32Q8N8J7 132 aa7.51□□□□□ -1.21
VCAN-207ENST00000507162 IGSF22Q8N9C0 903 aa7.51□□□□□ -1.21
VCAN-207ENST00000507162 PDCD6IPQ8WUM4 868 aaKnown RBP7.51□□□□□ -1.21
VCAN-207ENST00000507162 TMA16Q96EY4 203 aaKnown RBP7.51□□□□□ -1.21
VCAN-207ENST00000507162 CDK5RAP3Q96JB5 506 aa7.51□□□□□ -1.21
VCAN-207ENST00000507162 IL12RB2Q99665 862 aa7.51□□□□□ -1.21
VCAN-207ENST00000507162 CCDC3Q9BQI4 270 aa7.51□□□□□ -1.21
VCAN-207ENST00000507162 REEP2Q9BRK0 252 aa7.51□□□□□ -1.21
VCAN-207ENST00000507162 MMTAG2Q9BU76 263 aaKnown RBP7.51□□□□□ -1.21
VCAN-207ENST00000507162 PARVGQ9HBI0 331 aa7.51□□□□□ -1.21
VCAN-207ENST00000507162 PDRG1Q9NUG6 133 aa7.51□□□□□ -1.21
VCAN-207ENST00000507162 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.51□□□□□ -1.21
VCAN-207ENST00000507162 NCKIPSDQ9NZQ3 722 aa7.51□□□□□ -1.21
VCAN-207ENST00000507162 KCND2Q9NZV8 630 aa7.51□□□□□ -1.21
VCAN-207ENST00000507162 CYTH4Q9UIA0 394 aa7.51□□□□□ -1.21
VCAN-207ENST00000507162 GGA2Q9UJY4 613 aa7.51□□□□□ -1.21
VCAN-207ENST00000507162 NAGPAQ9UK23 515 aa7.51□□□□□ -1.21
VCAN-207ENST00000507162 DMTF1Q9Y222 760 aa7.51□□□□□ -1.21
VCAN-207ENST00000507162 UNC13CQ8NB66 2214 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 EFCAB7A8K855 629 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 TTC34A8MYJ7 566 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 TACC1O75410 805 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 CDC45O75419 566 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 RALAP11233 206 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 PRF1P14222 555 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 PRLRP16471 622 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 NR1D1P20393 614 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 C5AR1P21730 350 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 HOXD9P28356 352 aaPredicted RBP7.5□□□□□ -1.21
VCAN-207ENST00000507162 NOS2P35228 1153 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 NUDT1P36639 197 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 RPIAP49247 311 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 PDX1P52945 283 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 HNRNPKP61978 463 aaKnown RBP eCLIP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms