RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 ACP5P13686 325 aa4.49□□□□□ -1.69
TOPBP1-204ENST00000505804 KELP23276 732 aa4.49□□□□□ -1.69
TOPBP1-204ENST00000505804 PRPH2P23942 346 aa4.49□□□□□ -1.69
TOPBP1-204ENST00000505804 ADPRHP54922 357 aa4.49□□□□□ -1.69
TOPBP1-204ENST00000505804 HSF1Q00613 529 aa4.49□□□□□ -1.69
TOPBP1-204ENST00000505804 B4GALNT1Q00973 533 aa4.49□□□□□ -1.69
TOPBP1-204ENST00000505804 SRSF7Q16629 238 aaKnown RBP eCLIP4.49□□□□□ -1.69
TOPBP1-204ENST00000505804 KIAA1614Q5VZ46 1190 aa4.49□□□□□ -1.69
TOPBP1-204ENST00000505804 MTFR2Q6P444 385 aa4.49□□□□□ -1.69
TOPBP1-204ENST00000505804 MDGA2Q7Z553 956 aa4.49□□□□□ -1.69
TOPBP1-204ENST00000505804 NEK8Q86SG6 692 aa4.49□□□□□ -1.69
TOPBP1-204ENST00000505804 TMEM200AQ86VY9 491 aa4.49□□□□□ -1.69
TOPBP1-204ENST00000505804 SRRM1Q8IYB3 904 aaKnown RBP4.49□□□□□ -1.69
TOPBP1-204ENST00000505804 RBM17Q96I25 401 aaKnown RBP4.49□□□□□ -1.69
TOPBP1-204ENST00000505804 UBXN10Q96LJ8 280 aa4.49□□□□□ -1.69
TOPBP1-204ENST00000505804 KRTAP4-5Q9BYR2 181 aa4.49□□□□□ -1.69
TOPBP1-204ENST00000505804 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.49□□□□□ -1.69
TOPBP1-204ENST00000505804 MOV10Q9HCE1 1003 aaKnown RBP4.49□□□□□ -1.69
TOPBP1-204ENST00000505804 TXNRD2Q9NNW7 524 aa4.49□□□□□ -1.69
TOPBP1-204ENST00000505804 RIC8AQ9NPQ8 531 aa4.49□□□□□ -1.69
TOPBP1-204ENST00000505804 TMEM184CQ9NVA4 438 aa4.49□□□□□ -1.69
TOPBP1-204ENST00000505804 IPO11Q9UI26 975 aaKnown RBP4.49□□□□□ -1.69
TOPBP1-204ENST00000505804 FBXO4Q9UKT5 387 aa4.49□□□□□ -1.69
TOPBP1-204ENST00000505804 RRP7AQ9Y3A4 280 aaKnown RBP4.49□□□□□ -1.69
TOPBP1-204ENST00000505804 NPIPB13A6NJU9 1138 aa4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 NPIPB5A8MRT5 1133 aa4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 NPIPB4C9JG80 1138 aa4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 CREB3O43889 395 aa4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 USP12O75317 370 aa4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 HOXD9P28356 352 aaPredicted RBP4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 ABCG1P45844 678 aa4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 MAPK9P45984 424 aa4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 CPA2P48052 419 aa4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 MCM2P49736 904 aa4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 PAPOLAP51003 745 aaKnown RBP4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 CFHR1Q03591 330 aa4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 ZNF91Q05481 1191 aa4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 ALKBH1Q13686 389 aaKnown RBP4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 TAF12Q16514 161 aa4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 SLC9C1Q4G0N8 1177 aa4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 MTX3Q5HYI7 312 aa4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 ANO7Q6IWH7 933 aa4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 CYP26C1Q6V0L0 522 aa4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 ADGRF4Q8IZF3 695 aa4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 VPS52Q8N1B4 723 aa4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 PAQR4Q8N4S7 273 aaPredicted RBP4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 ENDOVQ8N8Q3 282 aaKnown RBP4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 OR52N4Q8NGI2 321 aa4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 FAM110DQ8TAY7 271 aaPredicted RBP4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 BCAS4Q8TDM0 211 aa4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 ZFPM2Q8WW38 1151 aa4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 IGFBPL1Q8WX77 278 aa4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 PPM1EQ8WY54 764 aa4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 IP6K1Q92551 441 aa4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 SIGLEC11Q96RL6 698 aa4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 TRIM31Q9BZY9 425 aa4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 PRSS22Q9GZN4 317 aa4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 NOD2Q9HC29 1040 aa4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 ERVK-5Q9HDB9 667 aa4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 TLR8Q9NR97 1041 aaKnown RBP4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 SAGE1Q9NXZ1 904 aa4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 RRN3Q9NYV6 651 aa4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 PI4KBQ9UBF8 816 aa4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 KLQ9UEF7 1012 aa4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 DNAJC16Q9Y2G8 782 aa4.48□□□□□ -1.69
TOPBP1-204ENST00000505804 MCIDASD6RGH6 385 aa4.47□□□□□ -1.69
TOPBP1-204ENST00000505804 UGDHO60701 494 aa4.47□□□□□ -1.69
TOPBP1-204ENST00000505804 CTSAP10619 480 aa4.47□□□□□ -1.69
TOPBP1-204ENST00000505804 PKMP14618 531 aaKnown RBP4.47□□□□□ -1.69
TOPBP1-204ENST00000505804 CPA1P15085 419 aa4.47□□□□□ -1.69
TOPBP1-204ENST00000505804 HOXB9P17482 250 aaPredicted RBP4.47□□□□□ -1.69
TOPBP1-204ENST00000505804 TFEBP19484 476 aa4.47□□□□□ -1.69
TOPBP1-204ENST00000505804 CNTFP26441 200 aa4.47□□□□□ -1.69
TOPBP1-204ENST00000505804 AVPR2P30518 371 aa4.47□□□□□ -1.69
TOPBP1-204ENST00000505804 PNPLA4P41247 253 aa4.47□□□□□ -1.69
TOPBP1-204ENST00000505804 SLC12A2P55011 1212 aa4.47□□□□□ -1.69
TOPBP1-204ENST00000505804 MRPS21P82921 87 aaKnown RBP4.47□□□□□ -1.69
TOPBP1-204ENST00000505804 SLC12A1Q13621 1099 aa4.47□□□□□ -1.69
TOPBP1-204ENST00000505804 EFR3AQ14156 821 aa4.47□□□□□ -1.69
TOPBP1-204ENST00000505804 CTXN3Q4LDR2 81 aa4.47□□□□□ -1.69
TOPBP1-204ENST00000505804 ARL13AQ5H913 290 aaPredicted RBP4.47□□□□□ -1.69
TOPBP1-204ENST00000505804 COLEC12Q5KU26 742 aa4.47□□□□□ -1.69
TOPBP1-204ENST00000505804 C10orf76Q5T2E6 689 aa4.47□□□□□ -1.69
TOPBP1-204ENST00000505804 ZNF626Q68DY1 528 aa4.47□□□□□ -1.69
TOPBP1-204ENST00000505804 SLC30A9Q6PML9 568 aa4.47□□□□□ -1.69
TOPBP1-204ENST00000505804 FAM57BQ71RH2 274 aa4.47□□□□□ -1.69
TOPBP1-204ENST00000505804 RTL10Q7L3V2 364 aa4.47□□□□□ -1.69
TOPBP1-204ENST00000505804 RNF144BQ7Z419 303 aa4.47□□□□□ -1.69
TOPBP1-204ENST00000505804 UBE2Q1Q7Z7E8 422 aa4.47□□□□□ -1.69
TOPBP1-204ENST00000505804 CPOQ8IVL8 374 aa4.47□□□□□ -1.69
TOPBP1-204ENST00000505804 FAM47BQ8NA70 645 aa4.47□□□□□ -1.69
TOPBP1-204ENST00000505804 WIPF2Q8TF74 440 aaPredicted RBP4.47□□□□□ -1.69
TOPBP1-204ENST00000505804 NRIP3Q9NQ35 241 aa4.47□□□□□ -1.69
TOPBP1-204ENST00000505804 SLC22A11Q9NSA0 550 aa4.47□□□□□ -1.69
TOPBP1-204ENST00000505804 THAP1Q9NVV9 213 aa4.47□□□□□ -1.69
TOPBP1-204ENST00000505804 SLC25A13Q9UJS0 675 aa4.47□□□□□ -1.69
TOPBP1-204ENST00000505804 DTX4Q9Y2E6 619 aa4.47□□□□□ -1.69
TOPBP1-204ENST00000505804 PKP3Q9Y446 797 aa4.47□□□□□ -1.69
TOPBP1-204ENST00000505804 SETD1BQ9UPS6 1966 aaKnown RBP4.46□□□□□ -1.7
TOPBP1-204ENST00000505804 ADAM10O14672 748 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms