RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 DUSP6Q16828 381 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 P3H1Q32P28 736 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 C5orf22Q49AR2 442 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 PRSS36Q5K4E3 855 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 RNASEH2BQ5TBB1 312 aaKnown RBP7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 ZNF697Q5TEC3 545 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 IZUMO3Q5VZ72 239 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 PPP2R2DQ66LE6 453 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 NUGGCQ68CJ6 796 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 EMBQ6PCB8 327 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 RFWD3Q6PCD5 774 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 DARS2Q6PI48 645 aaKnown RBP7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 Q6ZNB5 142 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 GSTA5Q7RTV2 222 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 TMC3Q7Z5M5 1100 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 RBM23Q86U06 439 aaKnown RBP7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 CDKL3Q8IVW4 592 aaPredicted RBP7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 TNS4Q8IZW8 715 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 MREGQ8N565 214 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 TAB3Q8N5C8 712 aaPredicted RBP7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 ARL14EPQ8N8R7 260 aaPredicted RBP7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 RTL3Q8N8U3 475 aaKnown RBP7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 ATP6V0D2Q8N8Y2 350 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 OR52K2Q8NGK3 314 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 CCDC110Q8TBZ0 833 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 MICAL1Q8TDZ2 1067 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 ARNTL2Q8WYA1 636 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 CPT1BQ92523 772 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 PLD4Q96BZ4 506 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 SNF8Q96H20 258 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 CELF6Q96J87 481 aaKnown RBP7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 CORO1BQ9BR76 489 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 WDR83Q9BRX9 315 aaKnown RBP7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 SLC39A8Q9C0K1 460 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 SMG9Q9H0W8 520 aaKnown RBP7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 TRPC7Q9HCX4 862 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 ARFGAP3Q9NP61 516 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 TMEM51Q9NW97 253 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 SMPD4Q9NXE4 827 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 PPARGC1AQ9UBK2 798 aaKnown RBP7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 UXTQ9UBK9 157 aaPredicted RBP7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 FEZ2Q9UHY8 353 aaPredicted RBP7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 STOML2Q9UJZ1 356 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 AGO1Q9UL18 857 aaKnown RBP7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 DOCK8Q8NF50 2099 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 MYO9BQ13459 2157 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 PDE4DIPQ5VU43 2346 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 CFAP69A5D8W1 941 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 C5orf60A6NFR6 353 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 HACD1B0YJ81 288 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 RNF103O00237 685 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 FGF10O15520 208 aaPredicted RBP7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 PPFIA2O75334 1257 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 ERLIN1O75477 346 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 GCATO75600 419 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 METTL18O95568 372 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 GLP2RO95838 553 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 PEX11BO96011 259 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 POU2F2P09086 479 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 IRF1P10914 325 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 MBL2P11226 248 aaPredicted RBP7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 MYL4P12829 197 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 RHOQP17081 205 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 ITIH2P19823 946 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 ADCY8P40145 1251 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 GARSP41250 739 aaKnown RBP7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 NRIP1P48552 1158 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 KPNA1P52294 538 aaPredicted RBP7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 NUBP1P53384 320 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 PLTPP55058 493 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 SLC7A9P82251 487 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 COG7P83436 770 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 ZBTB17Q13105 803 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 KCNJ11Q14654 390 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 CASP8Q14790 479 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 TEAD2Q15562 447 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 RAB30Q15771 203 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 TAF12Q16514 161 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 FAXCQ5TGI0 409 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 PDE12Q6L8Q7 609 aaKnown RBP7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 RWDD4Q6NW29 188 aaKnown RBP7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 ZNF534Q76KX8 674 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 TFAP2DQ7Z6R9 452 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 TADA2BQ86TJ2 420 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 CHSY1Q86X52 802 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 DENND1CQ8IV53 801 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 FAM217AQ8IXS0 508 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 CFAP52Q8N1V2 620 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 UMODL1-AS1Q8N2C9 162 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 C12orf76Q8N812 135 aaPredicted RBP7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 MAB21L3Q8N8X9 362 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 CCDC89Q8N998 374 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 NAT8LQ8N9F0 302 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 TFB1MQ8WVM0 346 aaKnown RBP7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 HTR3CQ8WXA8 447 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 RSAD2Q8WXG1 361 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 PRCCQ92733 491 aaPredicted RBP7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 AZIN2Q96A70 460 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms