RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 PPANQ9NQ55 473 aaKnown RBP18.72■□□□□ 0.59
LINC00535-201ENST00000501400 COMMD8Q9NX08 183 aa18.72■□□□□ 0.59
LINC00535-201ENST00000501400 KLHL8Q9P2G9 620 aaPredicted RBP18.72■□□□□ 0.59
LINC00535-201ENST00000501400 LAMA2P24043 3122 aaKnown RBP18.71■□□□□ 0.59
LINC00535-201ENST00000501400 RASA4BC9J798 803 aa18.71■□□□□ 0.59
LINC00535-201ENST00000501400 C2CD2LO14523 706 aa18.71■□□□□ 0.59
LINC00535-201ENST00000501400 RASA4O43374 803 aa18.71■□□□□ 0.59
LINC00535-201ENST00000501400 TIMP1P01033 207 aa18.71■□□□□ 0.59
LINC00535-201ENST00000501400 IGLV3-27P01718 113 aa18.71■□□□□ 0.59
LINC00535-201ENST00000501400 SOD2P04179 222 aa18.71■□□□□ 0.59
LINC00535-201ENST00000501400 BRAFP15056 766 aa18.71■□□□□ 0.59
LINC00535-201ENST00000501400 MLLT6P55198 1093 aaPredicted RBP18.71■□□□□ 0.59
LINC00535-201ENST00000501400 WDR5P61964 334 aaKnown RBP18.71■□□□□ 0.59
LINC00535-201ENST00000501400 TRIP4Q15650 581 aaPredicted RBP18.71■□□□□ 0.59
LINC00535-201ENST00000501400 PID1Q7Z2X4 250 aa18.71■□□□□ 0.59
LINC00535-201ENST00000501400 PRPF39Q86UA1 669 aaKnown RBP18.71■□□□□ 0.59
LINC00535-201ENST00000501400 MZB1Q8WU39 189 aa18.71■□□□□ 0.59
LINC00535-201ENST00000501400 ZNF419Q96HQ0 510 aaPredicted RBP18.71■□□□□ 0.59
LINC00535-201ENST00000501400 KIF9Q9HAQ2 790 aa18.71■□□□□ 0.59
LINC00535-201ENST00000501400 ZC3H7BQ9UGR2 993 aaKnown RBP18.71■□□□□ 0.59
LINC00535-201ENST00000501400 ZBTB24O43167 697 aaPredicted RBP18.7■□□□□ 0.58
LINC00535-201ENST00000501400 MLNP12872 115 aa18.7■□□□□ 0.58
LINC00535-201ENST00000501400 ATP2A2P16615 1042 aaKnown RBP18.7■□□□□ 0.58
LINC00535-201ENST00000501400 KBTBD12Q3ZCT8 623 aa18.7■□□□□ 0.58
LINC00535-201ENST00000501400 MS4A13Q5J8X5 152 aa18.7■□□□□ 0.58
LINC00535-201ENST00000501400 AFMIDQ63HM1 303 aa18.7■□□□□ 0.58
LINC00535-201ENST00000501400 ADGRD1Q6QNK2 874 aa18.7■□□□□ 0.58
LINC00535-201ENST00000501400 UNC5AQ6ZN44 842 aa18.7■□□□□ 0.58
LINC00535-201ENST00000501400 RTL3Q8N8U3 475 aaKnown RBP18.7■□□□□ 0.58
LINC00535-201ENST00000501400 C1orf74Q96LT6 269 aa18.7■□□□□ 0.58
LINC00535-201ENST00000501400 GBA3Q9H227 469 aa18.7■□□□□ 0.58
LINC00535-201ENST00000501400 CATSPERBQ9H7T0 1116 aa18.7■□□□□ 0.58
LINC00535-201ENST00000501400 CCSER2Q9H7U1 834 aa18.7■□□□□ 0.58
LINC00535-201ENST00000501400 PRDM5Q9NQX1 630 aaPredicted RBP18.7■□□□□ 0.58
LINC00535-201ENST00000501400 OLA1Q9NTK5 396 aaKnown RBP18.7■□□□□ 0.58
LINC00535-201ENST00000501400 INTS9Q9NV88 658 aaKnown RBP18.7■□□□□ 0.58
LINC00535-201ENST00000501400 MPP6Q9NZW5 540 aa18.7■□□□□ 0.58
LINC00535-201ENST00000501400 MARCH2Q9P0N8 246 aa18.7■□□□□ 0.58
LINC00535-201ENST00000501400 MTSS1O43312 755 aa18.7■□□□□ 0.58
LINC00535-201ENST00000501400 SEC24AO95486 1093 aa18.7■□□□□ 0.58
LINC00535-201ENST00000501400 CPP00450 1065 aa18.7■□□□□ 0.58
LINC00535-201ENST00000501400 SLC2A3P11169 496 aa18.7■□□□□ 0.58
LINC00535-201ENST00000501400 TUBP50607 506 aa18.7■□□□□ 0.58
LINC00535-201ENST00000501400 C10orf120Q5SQS8 335 aa18.7■□□□□ 0.58
LINC00535-201ENST00000501400 NLRP14Q86W24 1093 aa18.7■□□□□ 0.58
LINC00535-201ENST00000501400 MIB1Q86YT6 1006 aa18.7■□□□□ 0.58
LINC00535-201ENST00000501400 ZNF558Q96NG5 402 aa18.7■□□□□ 0.58
LINC00535-201ENST00000501400 CYTH2Q99418 400 aa18.7■□□□□ 0.58
LINC00535-201ENST00000501400 EBNA1BP2Q99848 306 aaKnown RBP18.7■□□□□ 0.58
LINC00535-201ENST00000501400 TMEM51Q9NW97 253 aa18.7■□□□□ 0.58
LINC00535-201ENST00000501400 DFFAO00273 331 aa18.69■□□□□ 0.58
LINC00535-201ENST00000501400 KIAA0355O15063 1070 aa18.69■□□□□ 0.58
LINC00535-201ENST00000501400 DSG1Q02413 1049 aa18.69■□□□□ 0.58
LINC00535-201ENST00000501400 ZNF33AQ06730 810 aa18.69■□□□□ 0.58
LINC00535-201ENST00000501400 NR1H3Q13133 447 aa18.69■□□□□ 0.58
LINC00535-201ENST00000501400 OLIG2Q13516 323 aa18.69■□□□□ 0.58
LINC00535-201ENST00000501400 TEX44Q53QW1 395 aa18.69■□□□□ 0.58
LINC00535-201ENST00000501400 SPOUT1Q5T280 376 aaKnown RBP18.69■□□□□ 0.58
LINC00535-201ENST00000501400 LRRC8BQ6P9F7 803 aa18.69■□□□□ 0.58
LINC00535-201ENST00000501400 AGAP3Q96P47 875 aa18.69■□□□□ 0.58
LINC00535-201ENST00000501400 TSGA13Q96PP4 275 aa18.69■□□□□ 0.58
LINC00535-201ENST00000501400 HERC2P3Q9BVR0 1158 aa18.69■□□□□ 0.58
LINC00535-201ENST00000501400 SLC39A8Q9C0K1 460 aa18.69■□□□□ 0.58
LINC00535-201ENST00000501400 PIH1D1Q9NWS0 290 aaKnown RBP18.69■□□□□ 0.58
LINC00535-201ENST00000501400 AFF4Q9UHB7 1163 aaKnown RBP18.69■□□□□ 0.58
LINC00535-201ENST00000501400 VANGL2Q9ULK5 521 aa18.69■□□□□ 0.58
LINC00535-201ENST00000501400 MAGED2Q9UNF1 606 aaPredicted RBP18.69■□□□□ 0.58
LINC00535-201ENST00000501400 WASH4PA8MWX3 477 aa18.68■□□□□ 0.58
LINC00535-201ENST00000501400 TLR5O60602 858 aa18.68■□□□□ 0.58
LINC00535-201ENST00000501400 APOEP02649 317 aa18.68■□□□□ 0.58
LINC00535-201ENST00000501400 HSPA8P11142 646 aaKnown RBP18.68■□□□□ 0.58
LINC00535-201ENST00000501400 NFKB1P19838 968 aa18.68■□□□□ 0.58
LINC00535-201ENST00000501400 PRKCHP24723 683 aa18.68■□□□□ 0.58
LINC00535-201ENST00000501400 STX2P32856 288 aa18.68■□□□□ 0.58
LINC00535-201ENST00000501400 KCTD11Q693B1 232 aa18.68■□□□□ 0.58
LINC00535-201ENST00000501400 KIAA1841Q6NSI8 718 aa18.68■□□□□ 0.58
LINC00535-201ENST00000501400 LZTR1Q8N653 840 aa18.68■□□□□ 0.58
LINC00535-201ENST00000501400 CNTD1Q8N815 330 aa18.68■□□□□ 0.58
LINC00535-201ENST00000501400 SLC44A1Q8WWI5 657 aa18.68■□□□□ 0.58
LINC00535-201ENST00000501400 ARNTL2Q8WYA1 636 aa18.68■□□□□ 0.58
LINC00535-201ENST00000501400 TEKT5Q96M29 485 aa18.68■□□□□ 0.58
LINC00535-201ENST00000501400 MLPHQ9BV36 600 aaPredicted RBP18.68■□□□□ 0.58
LINC00535-201ENST00000501400 UBE2OQ9C0C9 1292 aaKnown RBP18.68■□□□□ 0.58
LINC00535-201ENST00000501400 CCDC134Q9H6E4 229 aa18.68■□□□□ 0.58
LINC00535-201ENST00000501400 NOL6Q9H6R4 1146 aaKnown RBP18.68■□□□□ 0.58
LINC00535-201ENST00000501400 SMYD2Q9NRG4 433 aa18.68■□□□□ 0.58
LINC00535-201ENST00000501400 IGLV3-10A0A075B6K4 115 aa18.68■□□□□ 0.58
LINC00535-201ENST00000501400 A0A1W2PPM1 405 aa18.68■□□□□ 0.58
LINC00535-201ENST00000501400 MAFKO60675 156 aa18.68■□□□□ 0.58
LINC00535-201ENST00000501400 ABLIM3O94929 683 aa18.68■□□□□ 0.58
LINC00535-201ENST00000501400 AP2A1O95782 977 aa18.68■□□□□ 0.58
LINC00535-201ENST00000501400 ACRP10323 421 aa18.68■□□□□ 0.58
LINC00535-201ENST00000501400 CRADDP78560 199 aa18.68■□□□□ 0.58
LINC00535-201ENST00000501400 SARNPP82979 210 aaKnown RBP18.68■□□□□ 0.58
LINC00535-201ENST00000501400 COG7P83436 770 aa18.68■□□□□ 0.58
LINC00535-201ENST00000501400 SPARCL1Q14515 664 aa18.68■□□□□ 0.58
LINC00535-201ENST00000501400 CMTR2Q8IYT2 770 aaKnown RBP18.68■□□□□ 0.58
LINC00535-201ENST00000501400 ATPAF2Q8N5M1 289 aa18.68■□□□□ 0.58
LINC00535-201ENST00000501400 TMEM169Q96HH4 297 aa18.68■□□□□ 0.58
LINC00535-201ENST00000501400 CEP295NLQ96MC4 621 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms