RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 CCDC150Q8NCX0 1101 aa4.34□□□□□ -1.71
SMC4-227ENST00000497984 SRFBP1Q8NEF9 429 aaKnown RBP4.34□□□□□ -1.71
SMC4-227ENST00000497984 ENGASEQ8NFI3 743 aa4.34□□□□□ -1.71
SMC4-227ENST00000497984 SNX27Q96L92 541 aa4.34□□□□□ -1.71
SMC4-227ENST00000497984 OBP2AQ9NY56 170 aa4.34□□□□□ -1.71
SMC4-227ENST00000497984 LMTK3Q96Q04 1460 aa4.34□□□□□ -1.71
SMC4-227ENST00000497984 GOLGA6CA6NDK9 693 aa4.33□□□□□ -1.72
SMC4-227ENST00000497984 GOLGA6BA6NDN3 693 aa4.33□□□□□ -1.72
SMC4-227ENST00000497984 CXorf65A6NEN9 183 aa4.33□□□□□ -1.72
SMC4-227ENST00000497984 POM121BA6NF01 834 aa4.33□□□□□ -1.72
SMC4-227ENST00000497984 NDST3O95803 873 aa4.33□□□□□ -1.72
SMC4-227ENST00000497984 ITGA5P08648 1049 aa4.33□□□□□ -1.72
SMC4-227ENST00000497984 GOLGA6DP0CG33 693 aa4.33□□□□□ -1.72
SMC4-227ENST00000497984 IGFBP2P18065 325 aa4.33□□□□□ -1.72
SMC4-227ENST00000497984 POLE2P56282 527 aa4.33□□□□□ -1.72
SMC4-227ENST00000497984 SELENOVP59797 346 aa4.33□□□□□ -1.72
SMC4-227ENST00000497984 PMPCAQ10713 525 aa4.33□□□□□ -1.72
SMC4-227ENST00000497984 KIF5AQ12840 1032 aa4.33□□□□□ -1.72
SMC4-227ENST00000497984 GPR18Q14330 331 aa4.33□□□□□ -1.72
SMC4-227ENST00000497984 C9orf57Q5W0N0 161 aa4.33□□□□□ -1.72
SMC4-227ENST00000497984 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.33□□□□□ -1.724e-23■■■■■ 72.8
SMC4-227ENST00000497984 BEND5Q7L4P6 421 aa4.33□□□□□ -1.72
SMC4-227ENST00000497984 ARMC9Q7Z3E5 817 aa4.33□□□□□ -1.72
SMC4-227ENST00000497984 CADM3Q8N126 398 aa4.33□□□□□ -1.72
SMC4-227ENST00000497984 MYO1HQ8N1T3 1032 aa4.33□□□□□ -1.72
SMC4-227ENST00000497984 SLC22A17Q8WUG5 538 aa4.33□□□□□ -1.72
SMC4-227ENST00000497984 ADAMTS14Q8WXS8 1223 aa4.33□□□□□ -1.72
SMC4-227ENST00000497984 WDR77Q9BQA1 342 aaPredicted RBP4.33□□□□□ -1.72
SMC4-227ENST00000497984 CDT1Q9H211 546 aa4.33□□□□□ -1.72
SMC4-227ENST00000497984 PRDM11Q9NQV5 511 aa4.33□□□□□ -1.72
SMC4-227ENST00000497984 GOLGA6AQ9NYA3 693 aa4.33□□□□□ -1.72
SMC4-227ENST00000497984 KCNG2Q9UJ96 466 aa4.33□□□□□ -1.72
SMC4-227ENST00000497984 ERRFI1Q9UJM3 462 aaPredicted RBP4.33□□□□□ -1.72
SMC4-227ENST00000497984 FZD10Q9ULW2 581 aa4.33□□□□□ -1.72
SMC4-227ENST00000497984 SMTNL1A8MU46 457 aa4.32□□□□□ -1.72
SMC4-227ENST00000497984 BTBD18B2RXH4 712 aa4.32□□□□□ -1.72
SMC4-227ENST00000497984 I6L893 689 aaPredicted RBP4.32□□□□□ -1.72
SMC4-227ENST00000497984 NTN3O00634 580 aaPredicted RBP4.32□□□□□ -1.72
SMC4-227ENST00000497984 KPNA5O15131 536 aa4.32□□□□□ -1.72
SMC4-227ENST00000497984 LINC01565O15544 149 aa4.32□□□□□ -1.72
SMC4-227ENST00000497984 TAF5LO75529 589 aa4.32□□□□□ -1.72
SMC4-227ENST00000497984 CASP5P51878 434 aa4.32□□□□□ -1.72
SMC4-227ENST00000497984 NSUN2Q08J23 767 aaKnown RBP eCLIP4.32□□□□□ -1.72
SMC4-227ENST00000497984 GFOD2Q3B7J2 385 aa4.32□□□□□ -1.72
SMC4-227ENST00000497984 KRTAP24-1Q3LI83 254 aa4.32□□□□□ -1.72
SMC4-227ENST00000497984 FNBP1LQ5T0N5 605 aa4.32□□□□□ -1.72
SMC4-227ENST00000497984 WDR93Q6P2C0 686 aa4.32□□□□□ -1.72
SMC4-227ENST00000497984 C16orf82Q7Z2V1 217 aa4.32□□□□□ -1.72
SMC4-227ENST00000497984 FOXP4Q8IVH2 680 aaPredicted RBP4.32□□□□□ -1.72
SMC4-227ENST00000497984 KDM1BQ8NB78 822 aa4.32□□□□□ -1.72
SMC4-227ENST00000497984 COLEC11Q9BWP8 271 aa4.32□□□□□ -1.72
SMC4-227ENST00000497984 METTL14Q9HCE5 456 aaKnown RBP4.32□□□□□ -1.72
SMC4-227ENST00000497984 DTX4Q9Y2E6 619 aa4.32□□□□□ -1.72
SMC4-227ENST00000497984 J3KTA2 159 aa4.31□□□□□ -1.72
SMC4-227ENST00000497984 NKX2-8O15522 239 aa4.31□□□□□ -1.72
SMC4-227ENST00000497984 LDB3O75112 727 aa4.31□□□□□ -1.72
SMC4-227ENST00000497984 LCKP06239 509 aa4.31□□□□□ -1.72
SMC4-227ENST00000497984 ALDOCP09972 364 aaKnown RBP4.31□□□□□ -1.72
SMC4-227ENST00000497984 IDEP14735 1019 aa4.31□□□□□ -1.72
SMC4-227ENST00000497984 FAM76BQ5HYJ3 339 aa4.31□□□□□ -1.72
SMC4-227ENST00000497984 OTUD1Q5VV17 481 aaPredicted RBP4.31□□□□□ -1.72
SMC4-227ENST00000497984 DCAF12L2Q5VW00 463 aa4.31□□□□□ -1.72
SMC4-227ENST00000497984 MDGA2Q7Z553 956 aa4.31□□□□□ -1.72
SMC4-227ENST00000497984 CCDC33Q8N5R6 958 aa4.31□□□□□ -1.72
SMC4-227ENST00000497984 GLIS1Q8NBF1 620 aa4.31□□□□□ -1.72
SMC4-227ENST00000497984 ADPRHL1Q8NDY3 354 aa4.31□□□□□ -1.72
SMC4-227ENST00000497984 IP6K1Q92551 441 aa4.31□□□□□ -1.72
SMC4-227ENST00000497984 FAR2Q96K12 515 aa4.31□□□□□ -1.72
SMC4-227ENST00000497984 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.31□□□□□ -1.72
SMC4-227ENST00000497984 SFXN1Q9H9B4 322 aa4.31□□□□□ -1.72
SMC4-227ENST00000497984 PNRC2Q9NPJ4 139 aaKnown RBP4.31□□□□□ -1.72
SMC4-227ENST00000497984 RGL1Q9NZL6 768 aa4.31□□□□□ -1.72
SMC4-227ENST00000497984 TNFSF13BQ9Y275 285 aa4.31□□□□□ -1.72
SMC4-227ENST00000497984 LOC105369274A0A096LPK9 316 aa4.3□□□□□ -1.72
SMC4-227ENST00000497984 LOC102723532A0A0G2JNH3 316 aa4.3□□□□□ -1.72
SMC4-227ENST00000497984 SRRM3A6NNA2 597 aaPredicted RBP4.3□□□□□ -1.72
SMC4-227ENST00000497984 KCNJ18B7U540 433 aa4.3□□□□□ -1.72
SMC4-227ENST00000497984 GLUD1P00367 558 aa4.3□□□□□ -1.72
SMC4-227ENST00000497984 SRGAP2BP0DMP2 458 aa4.3□□□□□ -1.72
SMC4-227ENST00000497984 GLUD2P49448 558 aa4.3□□□□□ -1.72
SMC4-227ENST00000497984 COASYQ13057 564 aa4.3□□□□□ -1.72
SMC4-227ENST00000497984 CSHL1Q14406 222 aa4.3□□□□□ -1.72
SMC4-227ENST00000497984 GALNT3Q14435 633 aa4.3□□□□□ -1.72
SMC4-227ENST00000497984 MAPKAPK3Q16644 382 aa4.3□□□□□ -1.72
SMC4-227ENST00000497984 AAK1Q2M2I8 961 aa4.3□□□□□ -1.72
SMC4-227ENST00000497984 DNTTIP2Q5QJE6 756 aaKnown RBP4.3□□□□□ -1.72
SMC4-227ENST00000497984 C10orf76Q5T2E6 689 aa4.3□□□□□ -1.72
SMC4-227ENST00000497984 OR4N4Q8N0Y3 316 aa4.3□□□□□ -1.72
SMC4-227ENST00000497984 SLC25A41Q8N5S1 370 aa4.3□□□□□ -1.72
SMC4-227ENST00000497984 MCRS1Q96EZ8 462 aa4.3□□□□□ -1.72
SMC4-227ENST00000497984 ZNF419Q96HQ0 510 aaPredicted RBP4.3□□□□□ -1.72
SMC4-227ENST00000497984 ADAD1Q96M93 576 aaKnown RBP4.3□□□□□ -1.72
SMC4-227ENST00000497984 OSBPL5Q9H0X9 879 aaPredicted RBP4.3□□□□□ -1.72
SMC4-227ENST00000497984 DDX21Q9NR30 783 aaKnown RBP eCLIP4.3□□□□□ -1.721e-26■■■■■ 198.7
SMC4-227ENST00000497984 RNF146Q9NTX7 359 aa4.3□□□□□ -1.72
SMC4-227ENST00000497984 MAN2B2Q9Y2E5 1009 aa4.3□□□□□ -1.72
SMC4-227ENST00000497984 KIF26BQ2KJY2 2108 aa4.3□□□□□ -1.72
SMC4-227ENST00000497984 M0QYT0 321 aa4.29□□□□□ -1.72
SMC4-227ENST00000497984 MSI1O43347 362 aaKnown RBP4.29□□□□□ -1.72
SMC4-227ENST00000497984 PQBP1O60828 265 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms