RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 FNDC1Q4ZHG4 1894 aaPredicted RBP3.71□□□□□ -1.82
PHC3-216ENST00000497171 TBC1D3DA0A087WVF3 549 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 TBC1D3IA0A087WXS9 549 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 TBC1D3EA0A087X179 549 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 TBC1D3KA0A087X1G2 549 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.7□□□□□ -1.82
PHC3-216ENST00000497171 TBC1D3BA6NDS4 549 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 TBC1D3FA6NER0 549 aaPredicted RBP3.7□□□□□ -1.82
PHC3-216ENST00000497171 TBC1D3LB9A6J9 549 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 E7EVH7 732 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 CTIFO43310 598 aaKnown RBP3.7□□□□□ -1.82
PHC3-216ENST00000497171 CBFA2T3O75081 653 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 LARGE1O95461 756 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 IGKV3-20P01619 116 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 TBC1D3HP0C7X1 549 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 MYCLP12524 364 aaPredicted RBP3.7□□□□□ -1.82
PHC3-216ENST00000497171 MMP8P22894 467 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 ADD2P35612 726 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 IGHMBP2P38935 993 aaKnown RBP3.7□□□□□ -1.82
PHC3-216ENST00000497171 COPB1P53618 953 aaKnown RBP3.7□□□□□ -1.82
PHC3-216ENST00000497171 HILS1P60008 231 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 LMAN2Q12907 356 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 SLC12A1Q13621 1099 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 KCNJ12Q14500 433 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 AASDHQ4L235 1098 aaPredicted RBP3.7□□□□□ -1.82
PHC3-216ENST00000497171 TBC1D3GQ6DHY5 549 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 TBC1D3CQ6IPX1 549 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 PIP4P1Q86T03 277 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 TBC1D3Q8IZP1 549 aaPredicted RBP3.7□□□□□ -1.82
PHC3-216ENST00000497171 CLASRPQ8N2M8 674 aaKnown RBP3.7□□□□□ -1.82
PHC3-216ENST00000497171 PNPLA1Q8N8W4 532 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 CEP70Q8NHQ1 597 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 TMEM255BQ8WV15 326 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 RSC1A1Q92681 617 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 CTHRC1Q96CG8 243 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 PRR11Q96HE9 360 aaPredicted RBP3.7□□□□□ -1.82
PHC3-216ENST00000497171 FAR2Q96K12 515 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 ZFYVE19Q96K21 471 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 HS6ST2Q96MM7 605 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 COG8Q96MW5 612 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 LENG8Q96PV6 779 aaPredicted RBP3.7□□□□□ -1.82
PHC3-216ENST00000497171 MMS19Q96T76 1030 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 THAP7Q9BT49 309 aaPredicted RBP3.7□□□□□ -1.82
PHC3-216ENST00000497171 DDX23Q9BUQ8 820 aaKnown RBP3.7□□□□□ -1.82
PHC3-216ENST00000497171 CINPQ9BW66 212 aaPredicted RBP3.7□□□□□ -1.82
PHC3-216ENST00000497171 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 MRPL44Q9H9J2 332 aaKnown RBP3.7□□□□□ -1.82
PHC3-216ENST00000497171 CHODLQ9H9P2 273 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 RIC8AQ9NPQ8 531 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 VPS45Q9NRW7 570 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 TMEM184CQ9NVA4 438 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 NDUFAF4Q9P032 175 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 BAG5Q9UL15 447 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 TRPC5Q9UL62 973 aaPredicted RBP3.7□□□□□ -1.82
PHC3-216ENST00000497171 MAFFQ9ULX9 164 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 GABRQQ9UN88 632 aa3.7□□□□□ -1.82
PHC3-216ENST00000497171 UBE2J1Q9Y385 318 aaPredicted RBP3.7□□□□□ -1.82
PHC3-216ENST00000497171 FAM90A18PA6NE21 464 aa3.69□□□□□ -1.82
PHC3-216ENST00000497171 FAM90A16PA6NEW6 464 aa3.69□□□□□ -1.82
PHC3-216ENST00000497171 FAM90A9PA6NNJ1 464 aa3.69□□□□□ -1.82
PHC3-216ENST00000497171 FAM90A5PA8MXJ8 464 aa3.69□□□□□ -1.82
PHC3-216ENST00000497171 DHHO43323 396 aa3.69□□□□□ -1.82
PHC3-216ENST00000497171 SLC28A2O43868 658 aa3.69□□□□□ -1.82
PHC3-216ENST00000497171 POLBP06746 335 aa3.69□□□□□ -1.82
PHC3-216ENST00000497171 SLC3A2P08195 630 aaKnown RBP3.69□□□□□ -1.82
PHC3-216ENST00000497171 FAM90A15PP0C7V4 464 aa3.69□□□□□ -1.82
PHC3-216ENST00000497171 FAM90A14PP0C7W9 464 aa3.69□□□□□ -1.82
PHC3-216ENST00000497171 TMIGD3P0DMS9 266 aaPredicted RBP3.69□□□□□ -1.82
PHC3-216ENST00000497171 GRK5P34947 590 aa3.69□□□□□ -1.82
PHC3-216ENST00000497171 KCNJ4P48050 445 aa3.69□□□□□ -1.82
PHC3-216ENST00000497171 DIO1P49895 249 aa3.69□□□□□ -1.82
PHC3-216ENST00000497171 ACTR2P61160 394 aa3.69□□□□□ -1.82
PHC3-216ENST00000497171 PSG6Q00889 435 aa3.69□□□□□ -1.82
PHC3-216ENST00000497171 POU5F1BQ06416 359 aa3.69□□□□□ -1.82
PHC3-216ENST00000497171 SLC4A8Q2Y0W8 1093 aa3.69□□□□□ -1.82
PHC3-216ENST00000497171 GALNTL6Q49A17 601 aa3.69□□□□□ -1.82
PHC3-216ENST00000497171 FBXO47Q5MNV8 452 aa3.69□□□□□ -1.82
PHC3-216ENST00000497171 TTC22Q5TAA0 569 aa3.69□□□□□ -1.82
PHC3-216ENST00000497171 FAM90A2PQ658T7 463 aa3.69□□□□□ -1.82
PHC3-216ENST00000497171 CAPRIN2Q6IMN6 1127 aaKnown RBP3.69□□□□□ -1.82
PHC3-216ENST00000497171 CCDC70Q6NSX1 233 aa3.69□□□□□ -1.82
PHC3-216ENST00000497171 FBXL22Q6P050 247 aa3.69□□□□□ -1.82
PHC3-216ENST00000497171 PDXDC1Q6P996 788 aa3.69□□□□□ -1.82
PHC3-216ENST00000497171 CYP26C1Q6V0L0 522 aa3.69□□□□□ -1.82
PHC3-216ENST00000497171 MMS22LQ6ZRQ5 1243 aa3.69□□□□□ -1.82
PHC3-216ENST00000497171 TMEM57Q8N5G2 664 aa3.69□□□□□ -1.82
PHC3-216ENST00000497171 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.69□□□□□ -1.82
PHC3-216ENST00000497171 THAP4Q8WY91 577 aa3.69□□□□□ -1.82
PHC3-216ENST00000497171 OVCA2Q8WZ82 227 aa3.69□□□□□ -1.82
PHC3-216ENST00000497171 NLRP4Q96MN2 994 aa3.69□□□□□ -1.82
PHC3-216ENST00000497171 SLC12A4Q9UP95 1085 aa3.69□□□□□ -1.82
PHC3-216ENST00000497171 RRP7AQ9Y3A4 280 aaKnown RBP3.69□□□□□ -1.82
PHC3-216ENST00000497171 LRRFIP2Q9Y608 721 aaKnown RBP3.69□□□□□ -1.82
PHC3-216ENST00000497171 TTC3P53804 2025 aa3.69□□□□□ -1.82
PHC3-216ENST00000497171 AGAP5A6NIR3 686 aa3.68□□□□□ -1.82
PHC3-216ENST00000497171 SLC38A8A6NNN8 435 aa3.68□□□□□ -1.82
PHC3-216ENST00000497171 NCAM2O15394 837 aa3.68□□□□□ -1.82
PHC3-216ENST00000497171 PRAMEF2O60811 474 aa3.68□□□□□ -1.82
PHC3-216ENST00000497171 FAM155BO75949 473 aa3.68□□□□□ -1.82
PHC3-216ENST00000497171 SYF2O95926 243 aaKnown RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms