RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 ZNF623O75123 536 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 SNNO75324 88 aaPredicted RBP11.35□□□□□ -0.59
CMSS1-208ENST00000496116 ALDOAP04075 364 aaKnown RBP11.35□□□□□ -0.59
CMSS1-208ENST00000496116 CYBAP13498 195 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 EPHB2P29323 1055 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 MGAT3Q09327 533 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 GALNT2Q10471 571 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 STX3Q13277 289 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 MAPRE1Q15691 268 aaKnown RBP11.35□□□□□ -0.59
CMSS1-208ENST00000496116 INSCQ1MX18 579 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 PM20D1Q6GTS8 502 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 ARID3BQ8IVW6 561 aaPredicted RBP11.35□□□□□ -0.59
CMSS1-208ENST00000496116 TP53INP2Q8IXH6 220 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 SCML4Q8N228 414 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 TRPV1Q8NER1 839 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 RNF34Q969K3 372 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 AGAP3Q96P47 875 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 BTBD10Q9BSF8 475 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 GBA3Q9H227 469 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 TLE6Q9H808 572 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 FBXO6Q9NRD1 293 aaPredicted RBP11.35□□□□□ -0.59
CMSS1-208ENST00000496116 TMEM30AQ9NV96 361 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 VANGL2Q9ULK5 521 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 L3MBTL1Q9Y468 752 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 ARHGEF37A1IGU5 675 aa11.34□□□□□ -0.59
CMSS1-208ENST00000496116 MAGEB16A2A368 324 aa11.34□□□□□ -0.59
CMSS1-208ENST00000496116 I6L893 689 aaPredicted RBP11.34□□□□□ -0.59
CMSS1-208ENST00000496116 USP1O94782 785 aa11.34□□□□□ -0.59
CMSS1-208ENST00000496116 PGK1P00558 417 aa11.34□□□□□ -0.59
CMSS1-208ENST00000496116 CYP11A1P05108 521 aa11.34□□□□□ -0.59
CMSS1-208ENST00000496116 CYP2C18P33260 490 aa11.34□□□□□ -0.59
CMSS1-208ENST00000496116 THPOP40225 353 aa11.34□□□□□ -0.59
CMSS1-208ENST00000496116 PDE1CQ14123 709 aaPredicted RBP11.34□□□□□ -0.59
CMSS1-208ENST00000496116 FRG1Q14331 258 aaKnown RBP11.34□□□□□ -0.59
CMSS1-208ENST00000496116 PRPSAP1Q14558 356 aa11.34□□□□□ -0.59
CMSS1-208ENST00000496116 FASTKD1Q53R41 847 aaKnown RBP11.34□□□□□ -0.59
CMSS1-208ENST00000496116 FAM91A1Q658Y4 838 aa11.34□□□□□ -0.59
CMSS1-208ENST00000496116 FAM171BQ6P995 826 aa11.34□□□□□ -0.59
CMSS1-208ENST00000496116 DCLRE1AQ6PJP8 1040 aa11.34□□□□□ -0.59
CMSS1-208ENST00000496116 THEM5Q8N1Q8 247 aa11.34□□□□□ -0.59
CMSS1-208ENST00000496116 NPWQ8N729 165 aa11.34□□□□□ -0.59
CMSS1-208ENST00000496116 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.34□□□□□ -0.59
CMSS1-208ENST00000496116 FAM13CQ8NE31 585 aa11.34□□□□□ -0.59
CMSS1-208ENST00000496116 PAAF1Q9BRP4 392 aa11.34□□□□□ -0.59
CMSS1-208ENST00000496116 UPF3AQ9H1J1 476 aaKnown RBP11.34□□□□□ -0.59
CMSS1-208ENST00000496116 NUMBLQ9Y6R0 609 aa11.34□□□□□ -0.59
CMSS1-208ENST00000496116 ZBTB24O43167 697 aaPredicted RBP11.33□□□□□ -0.6
CMSS1-208ENST00000496116 LRIG2O94898 1065 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 ANP32DO95626 131 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 POMCP01189 267 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 ERVK-10P10266 1014 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 ESRRAP11474 423 aaPredicted RBP11.33□□□□□ -0.6
CMSS1-208ENST00000496116 BDNFP23560 247 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 TYK2P29597 1187 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 SPRP35270 261 aaPredicted RBP11.33□□□□□ -0.6
CMSS1-208ENST00000496116 COG7P83436 770 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 ZNF33AQ06730 810 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 GRIK3Q13003 919 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 WASHC2DQ5SRD0 308 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 N4BP2L1Q5TBK1 243 aaPredicted RBP11.33□□□□□ -0.6
CMSS1-208ENST00000496116 RGMBQ6NW40 437 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 BEND5Q7L4P6 421 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 BHLHA9Q7RTU4 235 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 TMEM135Q86UB9 458 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 WDR75Q8IWA0 830 aaKnown RBP11.33□□□□□ -0.6
CMSS1-208ENST00000496116 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.33□□□□□ -0.6
CMSS1-208ENST00000496116 ZNF669Q96BR6 464 aaPredicted RBP11.33□□□□□ -0.6
CMSS1-208ENST00000496116 PTCD3Q96EY7 689 aaKnown RBP11.33□□□□□ -0.6
CMSS1-208ENST00000496116 UROC1Q96N76 676 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 AGO3Q9H9G7 860 aaKnown RBP11.33□□□□□ -0.6
CMSS1-208ENST00000496116 CASS4Q9NQ75 786 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 SLC17A6Q9P2U8 582 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 ADAM28Q9UKQ2 775 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 PADI3Q9ULW8 664 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 TDRD15B5MCY1 1934 aaKnown RBP11.33□□□□□ -0.6
CMSS1-208ENST00000496116 A0A0U1RQF3 1178 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 ARHGAP42A6NI28 874 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 FCHO1O14526 889 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 GYG2O15488 501 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 PSMD3O43242 534 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 PLIN3O60664 434 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 KITP10721 976 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 SKIP12755 728 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 DNAJB2P25686 324 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 CD52P31358 61 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 NPY2RP49146 381 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 TSPY1Q01534 308 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 KCTD11Q693B1 232 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 NAPEPLDQ6IQ20 393 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 CTU1Q7Z7A3 348 aaKnown RBP11.33□□□□□ -0.6
CMSS1-208ENST00000496116 TAC4Q86UU9 113 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 GIMAP7Q8NHV1 300 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 SH3TC2Q8TF17 1288 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 RTP3Q9BQQ7 232 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 RHOBTB2Q9BYZ6 727 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 IL22Q9GZX6 179 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 OSBPL2Q9H1P3 480 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 ARL8BQ9NVJ2 186 aa11.33□□□□□ -0.6
CMSS1-208ENST00000496116 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.33□□□□□ -0.6
CMSS1-208ENST00000496116 PSAT1Q9Y617 370 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms