RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 YJEFN3A6XGL0 299 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 POM121CA8CG34 1229 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 E7ENQ6 273 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 H0YHG0 523 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 I3L4J1 428 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 RNF103O00237 685 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 DCLK1O15075 740 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 IRAK2O43187 625 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 DGKIO75912 1065 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 MT-ND3P03897 115 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 ERCC2P18074 760 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 TFE3P19532 575 aaPredicted RBP7.11□□□□□ -1.27
USP39-219ENST00000496047 IL4RP24394 825 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 EPHB2P29323 1055 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 SSTR1P30872 391 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 IFNAR2P48551 515 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 CXCR3P49682 368 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 NDUFV1P49821 464 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 KPNA1P52294 538 aaPredicted RBP7.11□□□□□ -1.27
USP39-219ENST00000496047 ATXN1P54253 815 aaKnown RBP7.11□□□□□ -1.27
USP39-219ENST00000496047 RPL10AP62906 217 aaKnown RBP7.11□□□□□ -1.27
USP39-219ENST00000496047 GBE1Q04446 702 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 DSC1Q08554 894 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 DPYSQ14117 519 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 PPP2R5DQ14738 602 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 FASTKD3Q14CZ7 662 aaKnown RBP7.11□□□□□ -1.27
USP39-219ENST00000496047 PRKD1Q15139 912 aaPredicted RBP7.11□□□□□ -1.27
USP39-219ENST00000496047 PKN2Q16513 984 aaKnown RBP7.11□□□□□ -1.27
USP39-219ENST00000496047 HP1BP3Q5SSJ5 553 aaPredicted RBP7.11□□□□□ -1.27
USP39-219ENST00000496047 FNBP1LQ5T0N5 605 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 RNF187Q5TA31 235 aaPredicted RBP7.11□□□□□ -1.27
USP39-219ENST00000496047 KIAA0319Q5VV43 1072 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 ANKRD22Q5VYY1 191 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 NAPEPLDQ6IQ20 393 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 DENND5BQ6ZUT9 1274 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 ANKS3Q6ZW76 656 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 PID1Q7Z2X4 250 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 YTHDF3Q7Z739 585 aaKnown RBP7.11□□□□□ -1.27
USP39-219ENST00000496047 CTU1Q7Z7A3 348 aaKnown RBP7.11□□□□□ -1.27
USP39-219ENST00000496047 LINC00523Q86TU6 105 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 TAC4Q86UU9 113 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 BPHLQ86WA6 291 aaPredicted RBP7.11□□□□□ -1.27
USP39-219ENST00000496047 SLC26A11Q86WA9 606 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 LRRC6Q86X45 466 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 NPAS4Q8IUM7 802 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 LRRC49Q8IUZ0 686 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 COLGALT2Q8IYK4 626 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 NUP93Q8N1F7 819 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 LRRC43Q8N309 656 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 ATPAF2Q8N5M1 289 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 GBP7Q8N8V2 638 aaPredicted RBP7.11□□□□□ -1.27
USP39-219ENST00000496047 ZMIZ2Q8NF64 920 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 DQX1Q8TE96 717 aaKnown RBP7.11□□□□□ -1.27
USP39-219ENST00000496047 CKAP2Q8WWK9 683 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 ATP2A3Q93084 1043 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 STAMBPL1Q96FJ0 436 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 C8orf48Q96LL4 319 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 CEP295NLQ96MC4 621 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 PWWP2AQ96N64 755 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 TGS1Q96RS0 853 aaKnown RBP7.11□□□□□ -1.27
USP39-219ENST00000496047 HAPLN3Q96S86 360 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 PAIP2Q9BPZ3 127 aaKnown RBP7.11□□□□□ -1.27
USP39-219ENST00000496047 ZCWPW1Q9H0M4 648 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 OSBPL2Q9H1P3 480 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 SMOC2Q9H3U7 446 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 USP29Q9HBJ7 922 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 TLR8Q9NR97 1041 aaKnown RBP7.11□□□□□ -1.27
USP39-219ENST00000496047 TBC1D13Q9NVG8 400 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 MTMR10Q9NXD2 777 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 BFARQ9NZS9 450 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 IGSF9Q9P2J2 1179 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 CACNG4Q9UBN1 327 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 ZNF180Q9UJW8 692 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 ZMYND8Q9ULU4 1186 aaPredicted RBP7.11□□□□□ -1.27
USP39-219ENST00000496047 PRG3Q9Y2Y8 225 aaPredicted RBP7.11□□□□□ -1.27
USP39-219ENST00000496047 TRIM17Q9Y577 477 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 PCDHA11Q9Y5I1 949 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 USP3Q9Y6I4 520 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 TEX264Q9Y6I9 313 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 FAM169AQ9Y6X4 670 aa7.11□□□□□ -1.27
USP39-219ENST00000496047 SZT2Q5T011 3432 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 SDR42E2A6NKP2 422 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 DCDC2CA8MYV0 355 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 HHLA1C9JL84 531 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 NRP1O14786 923 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 LPXNO60711 386 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 ANXA9O76027 345 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 OAZ2O95190 189 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 MAP3K6O95382 1288 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 ALDH2P05091 517 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 POLBP06746 335 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 SNRPAP09012 282 aaKnown RBP7.1□□□□□ -1.27
USP39-219ENST00000496047 FBXO45P0C2W1 286 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 TROVE2P10155 538 aaKnown RBP eCLIP7.1□□□□□ -1.27
USP39-219ENST00000496047 ALADP13716 330 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 PGAM1P18669 254 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 SEC24CP53992 1094 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 FAM189BP81408 668 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 PPIDQ08752 370 aaKnown RBP7.1□□□□□ -1.27
USP39-219ENST00000496047 DNAJC3Q13217 504 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms