RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 STK25O00506 426 aa14.98□□□□□ -0.01
BRCA1-223ENST00000494123 APODP05090 189 aa14.98□□□□□ -0.01
BRCA1-223ENST00000494123 RHOCP08134 193 aa14.98□□□□□ -0.01
BRCA1-223ENST00000494123 KDELR1P24390 212 aa14.98□□□□□ -0.01
BRCA1-223ENST00000494123 MSNP26038 577 aaKnown RBP14.98□□□□□ -0.01
BRCA1-223ENST00000494123 CTNNA2P26232 953 aa14.98□□□□□ -0.01
BRCA1-223ENST00000494123 HOXC13P31276 330 aa14.98□□□□□ -0.01
BRCA1-223ENST00000494123 MARCKSL1P49006 195 aa14.98□□□□□ -0.01
BRCA1-223ENST00000494123 HCAR3P49019 387 aa14.98□□□□□ -0.01
BRCA1-223ENST00000494123 GALK1P51570 392 aa14.98□□□□□ -0.01
BRCA1-223ENST00000494123 OXCT1P55809 520 aa14.98□□□□□ -0.01
BRCA1-223ENST00000494123 GRSF1Q12849 480 aaKnown RBP eCLIP14.98□□□□□ -0.01
BRCA1-223ENST00000494123 DPYSL3Q14195 570 aa14.98□□□□□ -0.01
BRCA1-223ENST00000494123 C6orf118Q5T5N4 469 aa14.98□□□□□ -0.01
BRCA1-223ENST00000494123 RNF43Q68DV7 783 aa14.98□□□□□ -0.01
BRCA1-223ENST00000494123 NAIF1Q69YI7 327 aaPredicted RBP14.98□□□□□ -0.01
BRCA1-223ENST00000494123 TXNDC11Q6PKC3 985 aa14.98□□□□□ -0.01
BRCA1-223ENST00000494123 CCDC50Q8IVM0 306 aa14.98□□□□□ -0.01
BRCA1-223ENST00000494123 SUGP1Q8IWZ8 645 aaKnown RBP14.98□□□□□ -0.01
BRCA1-223ENST00000494123 KATNAL2Q8IYT4 538 aa14.98□□□□□ -0.01
BRCA1-223ENST00000494123 FIBINQ8TAL6 211 aa14.98□□□□□ -0.01
BRCA1-223ENST00000494123 RAPGEF5Q92565 580 aa14.98□□□□□ -0.01
BRCA1-223ENST00000494123 KRT35Q92764 455 aa14.98□□□□□ -0.01
BRCA1-223ENST00000494123 RETREG1Q9H6L5 497 aa14.98□□□□□ -0.01
BRCA1-223ENST00000494123 ABCB8Q9NUT2 735 aa14.98□□□□□ -0.01
BRCA1-223ENST00000494123 TMEM248Q9NWD8 314 aa14.98□□□□□ -0.01
BRCA1-223ENST00000494123 DONSONQ9NYP3 566 aa14.98□□□□□ -0.01
BRCA1-223ENST00000494123 KIAA1522Q9P206 1035 aaPredicted RBP14.98□□□□□ -0.01
BRCA1-223ENST00000494123 PACSIN2Q9UNF0 486 aaPredicted RBP14.98□□□□□ -0.01
BRCA1-223ENST00000494123 NEU3Q9UQ49 428 aa14.98□□□□□ -0.01
BRCA1-223ENST00000494123 MRPS17Q9Y2R5 130 aaKnown RBP14.98□□□□□ -0.01
BRCA1-223ENST00000494123 TRIM24O15164 1050 aa14.97□□□□□ -0.01
BRCA1-223ENST00000494123 KAT7O95251 611 aa14.97□□□□□ -0.01
BRCA1-223ENST00000494123 CD48P09326 243 aa14.97□□□□□ -0.01
BRCA1-223ENST00000494123 CD72P21854 359 aa14.97□□□□□ -0.01
BRCA1-223ENST00000494123 MAPKAPK2P49137 400 aa14.97□□□□□ -0.01
BRCA1-223ENST00000494123 DNA2P51530 1060 aa14.97□□□□□ -0.01
BRCA1-223ENST00000494123 RWDD2BP57060 319 aa14.97□□□□□ -0.01
BRCA1-223ENST00000494123 ZNF569Q5MCW4 686 aa14.97□□□□□ -0.01
BRCA1-223ENST00000494123 ANKS1BQ7Z6G8 1248 aa14.97□□□□□ -0.01
BRCA1-223ENST00000494123 RTL3Q8N8U3 475 aaKnown RBP14.97□□□□□ -0.01
BRCA1-223ENST00000494123 FAM71BQ8TC56 605 aa14.97□□□□□ -0.01
BRCA1-223ENST00000494123 WFDC5Q8TCV5 224 aa14.97□□□□□ -0.01
BRCA1-223ENST00000494123 UBE2Q2Q8WVN8 375 aa14.97□□□□□ -0.01
BRCA1-223ENST00000494123 RNF25Q96BH1 459 aaPredicted RBP14.97□□□□□ -0.01
BRCA1-223ENST00000494123 RBM41Q96IZ5 413 aaKnown RBP14.97□□□□□ -0.01
BRCA1-223ENST00000494123 CSPG4P5Q96PW8 444 aa14.97□□□□□ -0.01
BRCA1-223ENST00000494123 ZNF670Q9BS34 389 aa14.97□□□□□ -0.01
BRCA1-223ENST00000494123 MFSD1Q9H3U5 465 aa14.97□□□□□ -0.01
BRCA1-223ENST00000494123 DNAI1Q9UI46 699 aa14.97□□□□□ -0.01
BRCA1-223ENST00000494123 GGA2Q9UJY4 613 aa14.97□□□□□ -0.01
BRCA1-223ENST00000494123 FBXO10Q9UK96 956 aa14.97□□□□□ -0.01
BRCA1-223ENST00000494123 NDRG2Q9UN36 371 aaKnown RBP14.97□□□□□ -0.01
BRCA1-223ENST00000494123 TBC1D3BA6NDS4 549 aa14.96□□□□□ -0.01
BRCA1-223ENST00000494123 ZRANB2O95218 330 aaKnown RBP eCLIP14.96□□□□□ -0.01
BRCA1-223ENST00000494123 CISD3P0C7P0 127 aa14.96□□□□□ -0.01
BRCA1-223ENST00000494123 PABPC1P11940 636 aaKnown RBP14.96□□□□□ -0.01
BRCA1-223ENST00000494123 ERCC2P18074 760 aa14.96□□□□□ -0.01
BRCA1-223ENST00000494123 HLA-FP30511 346 aa14.96□□□□□ -0.01
BRCA1-223ENST00000494123 CD70P32970 193 aa14.96□□□□□ -0.01
BRCA1-223ENST00000494123 GRIA2P42262 883 aa14.96□□□□□ -0.01
BRCA1-223ENST00000494123 ARSEP51690 589 aa14.96□□□□□ -0.01
BRCA1-223ENST00000494123 STARD6P59095 220 aa14.96□□□□□ -0.01
BRCA1-223ENST00000494123 LMAN2Q12907 356 aa14.96□□□□□ -0.01
BRCA1-223ENST00000494123 MMRN1Q13201 1228 aa14.96□□□□□ -0.01
BRCA1-223ENST00000494123 UBXN2BQ14CS0 331 aa14.96□□□□□ -0.01
BRCA1-223ENST00000494123 ANKRD20A8PQ5CZ79 823 aa14.96□□□□□ -0.01
BRCA1-223ENST00000494123 FSCBQ5H9T9 825 aa14.96□□□□□ -0.01
BRCA1-223ENST00000494123 ARTNQ5T4W7 220 aa14.96□□□□□ -0.01
BRCA1-223ENST00000494123 ASTLQ6HA08 431 aaPredicted RBP14.96□□□□□ -0.01
BRCA1-223ENST00000494123 CXorf57Q6NSI4 855 aaKnown RBP14.96□□□□□ -0.01
BRCA1-223ENST00000494123 TRIM67Q6ZTA4 783 aa14.96□□□□□ -0.01
BRCA1-223ENST00000494123 SETD3Q86TU7 594 aaPredicted RBP14.96□□□□□ -0.01
BRCA1-223ENST00000494123 NLRP14Q86W24 1093 aa14.96□□□□□ -0.01
BRCA1-223ENST00000494123 RCOR2Q8IZ40 523 aa14.96□□□□□ -0.01
BRCA1-223ENST00000494123 AHI1Q8N157 1196 aa14.96□□□□□ -0.01
BRCA1-223ENST00000494123 TERB1Q8NA31 727 aa14.96□□□□□ -0.01
BRCA1-223ENST00000494123 EXD1Q8NHP7 514 aa14.96□□□□□ -0.01
BRCA1-223ENST00000494123 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.96□□□□□ -0.01
BRCA1-223ENST00000494123 TSC1Q92574 1164 aa14.96□□□□□ -0.01
BRCA1-223ENST00000494123 MAK16Q9BXY0 300 aaKnown RBP14.96□□□□□ -0.01
BRCA1-223ENST00000494123 MUC3BQ9H195 1237 aa14.96□□□□□ -0.01
BRCA1-223ENST00000494123 TBC1D17Q9HA65 648 aa14.96□□□□□ -0.01
BRCA1-223ENST00000494123 TBC1D30Q9Y2I9 924 aa14.96□□□□□ -0.01
BRCA1-223ENST00000494123 SLC27A6Q9Y2P4 619 aa14.96□□□□□ -0.01
BRCA1-223ENST00000494123 TTC28Q96AY4 2481 aa14.96□□□□□ -0.02
BRCA1-223ENST00000494123 KANSL1LA0AUZ9 987 aa14.95□□□□□ -0.02
BRCA1-223ENST00000494123 WASH4PA8MWX3 477 aa14.95□□□□□ -0.02
BRCA1-223ENST00000494123 TNFRSF10AO00220 468 aa14.95□□□□□ -0.02
BRCA1-223ENST00000494123 DRD1P21728 446 aa14.95□□□□□ -0.02
BRCA1-223ENST00000494123 AMPD1P23109 780 aa14.95□□□□□ -0.02
BRCA1-223ENST00000494123 CETN2P41208 172 aa14.95□□□□□ -0.02
BRCA1-223ENST00000494123 CSKP41240 450 aa14.95□□□□□ -0.02
BRCA1-223ENST00000494123 SLC12A1Q13621 1099 aa14.95□□□□□ -0.02
BRCA1-223ENST00000494123 DPYSQ14117 519 aa14.95□□□□□ -0.02
BRCA1-223ENST00000494123 RPS6KA1Q15418 735 aa14.95□□□□□ -0.02
BRCA1-223ENST00000494123 TMEM196Q5HYL7 178 aa14.95□□□□□ -0.02
BRCA1-223ENST00000494123 MEI1Q5TIA1 1274 aa14.95□□□□□ -0.02
BRCA1-223ENST00000494123 RNF219Q5W0B1 726 aaPredicted RBP14.95□□□□□ -0.02
BRCA1-223ENST00000494123 TMCO3Q6UWJ1 677 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms