RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 RARRES1P49788 294 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 NDST1P52848 882 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 ST3GAL1Q11201 340 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 STK32CQ86UX6 486 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 WDR48Q8TAF3 677 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 PHF21BQ96EK2 531 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 RNF145Q96MT1 663 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 OSBPL6Q9BZF3 934 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 EPB41L4BQ9H329 900 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 HS6ST1O60243 411 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 STAU1O95793 577 aaKnown RBP20.5■□□□□ 0.87
RNF40-203ENST00000493683 CXCL8P10145 99 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 YWHAQP27348 245 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 GNA13Q14344 377 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 ALFQ53S48 1182 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 CBWD3Q5JTY5 395 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 CBWD5Q5RIA9 395 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 ZNF470Q6ECI4 717 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 ARHGAP22Q7Z5H3 698 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 TRPC4APQ8TEL6 797 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 CDRT15Q96T59 188 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 KCNQ5Q9NR82 932 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 GTF2A1LQ9UNN4 478 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 A0A087WZ62 844 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 LINC00854A0A1B0GVQ3 168 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 MICAL2O94851 1124 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 YY1P25490 414 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 MFSD7Q6UXD7 560 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 TMC7Q7Z402 723 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 C6orf62Q9GZU0 229 aaPredicted RBP20.5■□□□□ 0.87
RNF40-203ENST00000493683 TBKBP1A7MCY6 615 aa20.49■□□□□ 0.87
RNF40-203ENST00000493683 FAM187BQ17R55 369 aa20.49■□□□□ 0.87
RNF40-203ENST00000493683 DGKKQ5KSL6 1271 aa20.49■□□□□ 0.87
RNF40-203ENST00000493683 DNAJC18Q9H819 358 aa20.49■□□□□ 0.87
RNF40-203ENST00000493683 SYNPO2Q9UMS6 1093 aa20.49■□□□□ 0.87
RNF40-203ENST00000493683 SLIT1O75093 1534 aa20.49■□□□□ 0.87
RNF40-203ENST00000493683 LRRC10BA6NIK2 292 aa20.49■□□□□ 0.87
RNF40-203ENST00000493683 SEC22BO75396 215 aa20.49■□□□□ 0.87
RNF40-203ENST00000493683 RTN3O95197 1032 aaPredicted RBP20.49■□□□□ 0.87
RNF40-203ENST00000493683 SSTR1P30872 391 aa20.49■□□□□ 0.87
RNF40-203ENST00000493683 FAAP100Q0VG06 881 aa20.49■□□□□ 0.87
RNF40-203ENST00000493683 INO80DQ53TQ3 878 aaPredicted RBP20.49■□□□□ 0.87
RNF40-203ENST00000493683 OTUD3Q5T2D3 398 aaPredicted RBP20.49■□□□□ 0.87
RNF40-203ENST00000493683 ZNF410Q86VK4 478 aa20.49■□□□□ 0.87
RNF40-203ENST00000493683 ARHGEF19Q8IW93 802 aa20.49■□□□□ 0.87
RNF40-203ENST00000493683 FUKQ8N0W3 1084 aa20.49■□□□□ 0.87
RNF40-203ENST00000493683 FNIP1Q8TF40 1166 aa20.49■□□□□ 0.87
RNF40-203ENST00000493683 RNPEPL1Q9HAU8 725 aa20.49■□□□□ 0.87
RNF40-203ENST00000493683 ARHGEF3Q9NR81 526 aa20.49■□□□□ 0.87
RNF40-203ENST00000493683 ANAPC2Q9UJX6 822 aa20.49■□□□□ 0.87
RNF40-203ENST00000493683 DCTN2Q13561 401 aaKnown RBP20.49■□□□□ 0.87
RNF40-203ENST00000493683 DPYSL3Q14195 570 aa20.49■□□□□ 0.87
RNF40-203ENST00000493683 PGM5Q15124 567 aa20.49■□□□□ 0.87
RNF40-203ENST00000493683 BNIPLQ7Z465 357 aa20.49■□□□□ 0.87
RNF40-203ENST00000493683 CPB2Q96IY4 423 aa20.49■□□□□ 0.87
RNF40-203ENST00000493683 DUSP9Q99956 384 aaKnown RBP20.49■□□□□ 0.87
RNF40-203ENST00000493683 SH3BP4Q9P0V3 963 aa20.49■□□□□ 0.87
RNF40-203ENST00000493683 TBC1D12O60347 775 aa20.49■□□□□ 0.87
RNF40-203ENST00000493683 IFI35P80217 286 aaPredicted RBP20.49■□□□□ 0.87
RNF40-203ENST00000493683 AMPD2Q01433 879 aa20.49■□□□□ 0.87
RNF40-203ENST00000493683 ITPK1Q13572 414 aa20.49■□□□□ 0.87
RNF40-203ENST00000493683 GSTA3Q16772 222 aa20.49■□□□□ 0.87
RNF40-203ENST00000493683 ZNF557Q8N988 423 aaPredicted RBP20.49■□□□□ 0.87
RNF40-203ENST00000493683 MOSPD2Q8NHP6 518 aa20.49■□□□□ 0.87
RNF40-203ENST00000493683 CAPN10Q9HC96 672 aa20.49■□□□□ 0.87
RNF40-203ENST00000493683 DCDC2CA8MYV0 355 aa20.49■□□□□ 0.87
RNF40-203ENST00000493683 FEN1P39748 380 aaKnown RBP20.49■□□□□ 0.87
RNF40-203ENST00000493683 ELF3P78545 371 aaPredicted RBP20.49■□□□□ 0.87
RNF40-203ENST00000493683 SLC27A1Q6PCB7 646 aa20.49■□□□□ 0.87
RNF40-203ENST00000493683 B3GNT6Q6ZMB0 384 aa20.49■□□□□ 0.87
RNF40-203ENST00000493683 QRFPRQ96P65 431 aa20.49■□□□□ 0.87
RNF40-203ENST00000493683 FDXACB1Q9BRP7 624 aaPredicted RBP20.49■□□□□ 0.87
RNF40-203ENST00000493683 NLNQ9BYT8 704 aa20.49■□□□□ 0.87
RNF40-203ENST00000493683 ELOVL4Q9GZR5 314 aa20.49■□□□□ 0.87
RNF40-203ENST00000493683 PRR23AA6NEV1 266 aa20.48■□□□□ 0.87
RNF40-203ENST00000493683 MAP2K7O14733 419 aa20.48■□□□□ 0.87
RNF40-203ENST00000493683 VTNP04004 478 aa20.48■□□□□ 0.87
RNF40-203ENST00000493683 GPR15P49685 360 aa20.48■□□□□ 0.87
RNF40-203ENST00000493683 TTC23Q5W5X9 447 aa20.48■□□□□ 0.87
RNF40-203ENST00000493683 ZNF662Q6ZS27 426 aa20.48■□□□□ 0.87
RNF40-203ENST00000493683 MAP4K3Q8IVH8 894 aa20.48■□□□□ 0.87
RNF40-203ENST00000493683 C8orf59Q8N0T1 100 aaPredicted RBP20.48■□□□□ 0.87
RNF40-203ENST00000493683 MAGEB10Q96LZ2 347 aaPredicted RBP20.48■□□□□ 0.87
RNF40-203ENST00000493683 PNMA5Q96PV4 448 aa20.48■□□□□ 0.87
RNF40-203ENST00000493683 IL22Q9GZX6 179 aa20.48■□□□□ 0.87
RNF40-203ENST00000493683 GUCY1B2O75343 617 aa20.48■□□□□ 0.87
RNF40-203ENST00000493683 CELF2O95319 508 aaKnown RBP20.48■□□□□ 0.87
RNF40-203ENST00000493683 ALDH5A1P51649 535 aaPredicted RBP20.48■□□□□ 0.87
RNF40-203ENST00000493683 STX4Q12846 297 aa20.48■□□□□ 0.87
RNF40-203ENST00000493683 INTS11Q5TA45 600 aaKnown RBP20.48■□□□□ 0.87
RNF40-203ENST00000493683 KRT74Q7RTS7 529 aa20.48■□□□□ 0.87
RNF40-203ENST00000493683 RTL3Q8N8U3 475 aaKnown RBP20.48■□□□□ 0.87
RNF40-203ENST00000493683 CENPIQ92674 756 aaPredicted RBP20.48■□□□□ 0.87
RNF40-203ENST00000493683 ACKR2O00590 384 aa20.48■□□□□ 0.87
RNF40-203ENST00000493683 FAM153BP0C7A2 387 aa20.48■□□□□ 0.87
RNF40-203ENST00000493683 CYP2A6P11509 494 aaPredicted RBP20.48■□□□□ 0.87
RNF40-203ENST00000493683 HOXB6P17509 224 aaKnown RBP20.48■□□□□ 0.87
RNF40-203ENST00000493683 CCNA2P20248 432 aa20.48■□□□□ 0.87
RNF40-203ENST00000493683 S100A3P33764 101 aa20.48■□□□□ 0.87
RNF40-203ENST00000493683 FAM153CQ494X1 144 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms